ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R9W:B14:B15

Extra

PDB:
ATOM 1 O3' A A 13 -37.078 -15.044 -3.120 1.00110.58 O
ATOM 2 P C A 14 -35.687 -14.544 -3.753 1.00109.72 P
ATOM 3 OP1 C A 14 -34.894 -15.754 -4.075 1.00111.98 O
ATOM 4 OP2 C A 14 -35.112 -13.549 -2.817 1.00111.52 O
ATOM 5 O5' C A 14 -36.146 -13.817 -5.100 1.00128.27 O
ATOM 6 C5' C A 14 -36.443 -14.560 -6.278 1.00121.66 C
ATOM 7 C4' C A 14 -36.660 -13.651 -7.466 1.00114.70 C
ATOM 8 O4' C A 14 -37.828 -12.816 -7.236 1.00111.77 O
ATOM 9 C3' C A 14 -35.537 -12.663 -7.764 1.00109.56 C
ATOM 10 O3' C A 14 -34.491 -13.232 -8.536 1.00107.74 O
ATOM 11 C2' C A 14 -36.265 -11.520 -8.463 1.00106.63 C
ATOM 12 O2' C A 14 -36.511 -11.835 -9.824 1.00102.19 O
ATOM 13 C1' C A 14 -37.599 -11.512 -7.723 1.00109.96 C
ATOM 14 N1 C A 14 -37.578 -10.592 -6.576 1.00113.47 N
ATOM 15 C2 C A 14 -38.078 -9.303 -6.735 1.00114.03 C
ATOM 16 O2 C A 14 -38.525 -8.973 -7.847 1.00111.08 O
ATOM 17 N3 C A 14 -38.052 -8.468 -5.668 1.00115.50 N
ATOM 18 C4 C A 14 -37.556 -8.882 -4.495 1.00114.36 C
ATOM 19 N4 C A 14 -37.547 -8.031 -3.467 1.00113.03 N
ATOM 20 C5 C A 14 -37.039 -10.194 -4.314 1.00112.98 C
ATOM 21 C6 C A 14 -37.073 -11.004 -5.374 1.00113.33 C
ATOM 22 P C A 15 -32.993 -12.659 -8.422 1.00122.84 P
ATOM 23 OP1 C A 15 -32.155 -13.420 -9.386 1.00119.67 O
ATOM 24 OP2 C A 15 -32.625 -12.681 -6.988 1.00124.36 O
ATOM 25 O5' C A 15 -33.156 -11.155 -8.914 1.00102.87 O
TER

ATOM 1 O3' C B 14 -34.491 -13.232 -8.536 1.00107.74 O
ATOM 2 P C B 15 -32.993 -12.659 -8.422 1.00122.84 P
ATOM 3 OP1 C B 15 -32.155 -13.420 -9.386 1.00119.67 O
ATOM 4 OP2 C B 15 -32.625 -12.681 -6.988 1.00124.36 O
ATOM 5 O5' C B 15 -33.156 -11.155 -8.914 1.00102.87 O
ATOM 6 C5' C B 15 -33.700 -10.858 -10.192 1.00 94.78 C
ATOM 7 C4' C B 15 -33.600 -9.388 -10.499 1.00 87.09 C
ATOM 8 O4' C B 15 -34.699 -8.674 -9.871 1.00 90.46 O
ATOM 9 C3' C B 15 -32.364 -8.691 -9.963 1.00 81.40 C
ATOM 10 O3' C B 15 -31.215 -8.908 -10.754 1.00 70.22 O
ATOM 11 C2' C B 15 -32.808 -7.238 -9.891 1.00 84.32 C
ATOM 12 O2' C B 15 -32.813 -6.644 -11.178 1.00 83.56 O
ATOM 13 C1' C B 15 -34.254 -7.403 -9.429 1.00 91.81 C
ATOM 14 N1 C B 15 -34.352 -7.355 -7.958 1.00 97.80 N
ATOM 15 C2 C B 15 -34.369 -6.097 -7.356 1.00 95.42 C
ATOM 16 O2 C B 15 -34.331 -5.089 -8.081 1.00 90.28 O
ATOM 17 N3 C B 15 -34.433 -6.019 -6.007 1.00 98.86 N
ATOM 18 C4 C B 15 -34.471 -7.134 -5.270 1.00 98.67 C
ATOM 19 N4 C B 15 -34.536 -7.001 -3.942 1.00 95.60 N
ATOM 20 C5 C B 15 -34.444 -8.431 -5.864 1.00 98.25 C
ATOM 21 C6 C B 15 -34.379 -8.496 -7.199 1.00 98.85 C
ATOM 22 P U B 16 -29.806 -9.199 -10.048 1.00 91.18 P
ATOM 23 OP1 U B 16 -28.979 -9.964 -11.012 1.00 87.47 O
ATOM 24 OP2 U B 16 -30.098 -9.799 -8.720 1.00 98.24 O
ATOM 25 O5' U B 16 -29.213 -7.740 -9.868 1.00 85.83 O
TER

Atoms:
C2: (-38.078,-9.303,-6.735)
OP1: (-34.894,-15.754,-4.075)
OP2: (-35.112,-13.549,-2.817)
C4: (-37.556,-8.882,-4.495)
O5': (-36.146,-13.817,-5.100)
C3': (-35.537,-12.663,-7.764)
C1': (-37.599,-11.512,-7.723)
O4': (-37.828,-12.816,-7.236)
C5': (-36.443,-14.560,-6.278)
P: (-35.687,-14.544,-3.753)
O2: (-38.525,-8.973,-7.847)
C4': (-36.660,-13.651,-7.466)
C2': (-36.265,-11.520,-8.463)
O2': (-36.511,-11.835,-9.824)
N1: (-37.578,-10.592,-6.576)
N3: (-38.052,-8.468,-5.668)
N4: (-37.547,-8.031,-3.467)
C6: (-37.073,-11.004,-5.374)
C5: (-37.039,-10.194,-4.314)
O3': (-34.491,-13.232,-8.536)
C2: (-34.369,-6.097,-7.356)
OP1: (-32.155,-13.420,-9.386)
OP2: (-32.625,-12.681,-6.988)
C4: (-34.471,-7.134,-5.270)
O5': (-33.156,-11.155,-8.914)
C3': (-32.364,-8.691,-9.963)
C1': (-34.254,-7.403,-9.429)
O4': (-34.699,-8.674,-9.871)
C5': (-33.700,-10.858,-10.192)
P: (-32.993,-12.659,-8.422)
O2: (-34.331,-5.089,-8.081)
C4': (-33.600,-9.388,-10.499)
C2': (-32.808,-7.238,-9.891)
O2': (-32.813,-6.644,-11.178)
N1: (-34.352,-7.355,-7.958)
N3: (-34.433,-6.019,-6.007)
N4: (-34.536,-7.001,-3.942)
C6: (-34.379,-8.496,-7.199)
C5: (-34.444,-8.431,-5.864)
O3': (-31.215,-8.908,-10.754)
Image (generated by PyMOL):
PyMOL image
show in jmol