ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXE:B36:B37

Extra

PDB:
ATOM 1 O3' G A 35 30.084 18.801 14.796 1.00 15.34 O
ATOM 2 P C A 36 28.806 18.678 13.831 1.00 17.31 P
ATOM 3 OP1 C A 36 28.553 20.020 13.246 1.00 22.51 O
ATOM 4 OP2 C A 36 27.724 17.984 14.562 1.00 20.99 O
ATOM 5 O5' C A 36 29.292 17.700 12.672 1.00 17.83 O
ATOM 6 C5' C A 36 30.360 18.064 11.802 1.00 17.58 C
ATOM 7 C4' C A 36 30.782 16.871 10.982 1.00 19.22 C
ATOM 8 O4' C A 36 31.366 15.872 11.860 1.00 18.69 O
ATOM 9 C3' C A 36 29.649 16.126 10.296 1.00 19.87 C
ATOM 10 O3' C A 36 29.319 16.720 9.050 1.00 20.84 O
ATOM 11 C2' C A 36 30.252 14.746 10.094 1.00 19.12 C
ATOM 12 O2' C A 36 31.134 14.736 8.998 1.00 20.07 O
ATOM 13 C1' C A 36 31.052 14.576 11.387 1.00 18.04 C
ATOM 14 N1 C A 36 30.294 13.879 12.430 1.00 19.83 N
ATOM 15 C2 C A 36 30.390 12.487 12.509 1.00 20.12 C
ATOM 16 O2 C A 36 31.100 11.885 11.689 1.00 20.93 O
ATOM 17 N3 C A 36 29.709 11.831 13.473 1.00 19.12 N
ATOM 18 C4 C A 36 28.963 12.514 14.342 1.00 17.08 C
ATOM 19 N4 C A 36 28.351 11.827 15.297 1.00 12.69 N
ATOM 20 C5 C A 36 28.827 13.934 14.270 1.00 15.95 C
ATOM 21 C6 C A 36 29.508 14.570 13.309 1.00 17.34 C
ATOM 22 P C A 37 27.835 16.553 8.471 1.00 26.19 P
ATOM 23 OP1 C A 37 27.764 17.229 7.148 1.00 24.51 O
ATOM 24 OP2 C A 37 26.915 16.958 9.555 1.00 27.00 O
ATOM 25 O5' C A 37 27.666 14.982 8.249 1.00 22.57 O
TER

ATOM 1 O3' C B 36 29.319 16.720 9.050 1.00 20.84 O
ATOM 2 P C B 37 27.835 16.553 8.471 1.00 26.19 P
ATOM 3 OP1 C B 37 27.764 17.229 7.148 1.00 24.51 O
ATOM 4 OP2 C B 37 26.915 16.958 9.555 1.00 27.00 O
ATOM 5 O5' C B 37 27.666 14.982 8.249 1.00 22.57 O
ATOM 6 C5' C B 37 28.305 14.357 7.156 1.00 21.04 C
ATOM 7 C4' C B 37 28.209 12.859 7.260 1.00 20.55 C
ATOM 8 O4' C B 37 28.805 12.415 8.504 1.00 20.46 O
ATOM 9 C3' C B 37 26.824 12.232 7.299 1.00 20.28 C
ATOM 10 O3' C B 37 26.263 12.113 5.994 1.00 18.84 O
ATOM 11 C2' C B 37 27.154 10.847 7.829 1.00 19.90 C
ATOM 12 O2' C B 37 27.729 10.048 6.825 1.00 20.97 O
ATOM 13 C1' C B 37 28.228 11.167 8.868 1.00 20.63 C
ATOM 14 N1 C B 37 27.608 11.269 10.194 1.00 20.76 N
ATOM 15 C2 C B 37 27.259 10.082 10.838 1.00 20.86 C
ATOM 16 O2 C B 37 27.533 8.998 10.286 1.00 19.26 O
ATOM 17 N3 C B 37 26.633 10.138 12.029 1.00 19.87 N
ATOM 18 C4 C B 37 26.355 11.320 12.580 1.00 19.91 C
ATOM 19 N4 C B 37 25.712 11.324 13.761 1.00 21.41 N
ATOM 20 C5 C B 37 26.719 12.547 11.952 1.00 16.50 C
ATOM 21 C6 C B 37 27.344 12.475 10.778 1.00 19.24 C
ATOM 22 P A B 38 24.666 12.161 5.809 1.00 21.24 P
ATOM 23 OP1 A B 38 24.356 12.113 4.356 1.00 19.53 O
ATOM 24 OP2 A B 38 24.138 13.275 6.634 1.00 18.16 O
ATOM 25 O5' A B 38 24.148 10.803 6.454 1.00 22.16 O
TER

Atoms:
C2: (30.390,12.487,12.509)
OP1: (28.553,20.020,13.246)
OP2: (27.724,17.984,14.562)
C4: (28.963,12.514,14.342)
O5': (29.292,17.700,12.672)
C3': (29.649,16.126,10.296)
C1': (31.052,14.576,11.387)
O4': (31.366,15.872,11.860)
C5': (30.360,18.064,11.802)
P: (28.806,18.678,13.831)
O2: (31.100,11.885,11.689)
C4': (30.782,16.871,10.982)
C2': (30.252,14.746,10.094)
O2': (31.134,14.736,8.998)
N1: (30.294,13.879,12.430)
N3: (29.709,11.831,13.473)
N4: (28.351,11.827,15.297)
C6: (29.508,14.570,13.309)
C5: (28.827,13.934,14.270)
O3': (29.319,16.720,9.050)
C2: (27.259,10.082,10.838)
OP1: (27.764,17.229,7.148)
OP2: (26.915,16.958,9.555)
C4: (26.355,11.320,12.580)
O5': (27.666,14.982,8.249)
C3': (26.824,12.232,7.299)
C1': (28.228,11.167,8.868)
O4': (28.805,12.415,8.504)
C5': (28.305,14.357,7.156)
P: (27.835,16.553,8.471)
O2: (27.533,8.998,10.286)
C4': (28.209,12.859,7.260)
C2': (27.154,10.847,7.829)
O2': (27.729,10.048,6.825)
N1: (27.608,11.269,10.194)
N3: (26.633,10.138,12.029)
N4: (25.712,11.324,13.761)
C6: (27.344,12.475,10.778)
C5: (26.719,12.547,11.952)
O3': (26.263,12.113,5.994)
Image (generated by PyMOL):
PyMOL image
show in jmol