Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01871:01872
Extra
PDB:
ATOM 1 O3' A A1870 109.144 91.102 37.684 1.00 80.37 O
ATOM 2 P C A1871 108.890 89.538 37.404 1.00 81.78 P
ATOM 3 OP1 C A1871 109.189 89.309 35.967 1.00 81.41 O
ATOM 4 OP2 C A1871 107.552 89.177 37.941 1.00 82.13 O
ATOM 5 O5' C A1871 109.987 88.798 38.296 1.00 80.74 O
ATOM 6 C5' C A1871 111.384 88.851 37.948 1.00 81.10 C
ATOM 7 C4' C A1871 112.189 87.952 38.857 1.00 82.12 C
ATOM 8 O4' C A1871 112.160 88.476 40.213 1.00 82.72 O
ATOM 9 C3' C A1871 111.674 86.532 39.010 1.00 83.01 C
ATOM 10 O3' C A1871 112.012 85.688 37.914 1.00 84.81 O
ATOM 11 C2' C A1871 112.303 86.118 40.333 1.00 83.44 C
ATOM 12 O2' C A1871 113.684 85.825 40.226 1.00 83.29 O
ATOM 13 C1' C A1871 112.123 87.402 41.147 1.00 82.80 C
ATOM 14 N1 C A1871 110.820 87.442 41.858 1.00 83.20 N
ATOM 15 C2 C A1871 110.703 86.827 43.127 1.00 82.83 C
ATOM 16 O2 C A1871 111.697 86.283 43.634 1.00 82.81 O
ATOM 17 N3 C A1871 109.506 86.847 43.763 1.00 82.90 N
ATOM 18 C4 C A1871 108.454 87.447 43.193 1.00 83.36 C
ATOM 19 N4 C A1871 107.291 87.442 43.856 1.00 82.39 N
ATOM 20 C5 C A1871 108.545 88.082 41.916 1.00 83.35 C
ATOM 21 C6 C A1871 109.733 88.057 41.293 1.00 83.25 C
ATOM 22 P C A1872 110.970 84.553 37.426 1.00 85.46 P
ATOM 23 OP1 C A1872 111.328 84.180 36.032 1.00 85.32 O
ATOM 24 OP2 C A1872 109.585 85.006 37.721 1.00 86.14 O
ATOM 25 O5' C A1872 111.298 83.317 38.374 1.00 84.42 O
TER
ATOM 1 O3' C B1871 112.012 85.688 37.914 1.00 84.81 O
ATOM 2 P C B1872 110.970 84.553 37.426 1.00 85.46 P
ATOM 3 OP1 C B1872 111.328 84.180 36.032 1.00 85.32 O
ATOM 4 OP2 C B1872 109.585 85.006 37.721 1.00 86.14 O
ATOM 5 O5' C B1872 111.298 83.317 38.374 1.00 84.42 O
ATOM 6 C5' C B1872 112.616 82.741 38.390 1.00 85.70 C
ATOM 7 C4' C B1872 112.747 81.768 39.534 1.00 86.37 C
ATOM 8 O4' C B1872 112.654 82.489 40.791 1.00 86.75 O
ATOM 9 C3' C B1872 111.647 80.724 39.624 1.00 85.60 C
ATOM 10 O3' C B1872 111.841 79.637 38.728 1.00 84.83 O
ATOM 11 C2' C B1872 111.698 80.330 41.093 1.00 85.97 C
ATOM 12 O2' C B1872 112.748 79.440 41.411 1.00 84.10 O
ATOM 13 C1' C B1872 111.964 81.691 41.744 1.00 87.65 C
ATOM 14 N1 C B1872 110.713 82.381 42.119 1.00 88.75 N
ATOM 15 C2 C B1872 110.050 81.982 43.287 1.00 89.22 C
ATOM 16 O2 C B1872 110.530 81.059 43.970 1.00 89.93 O
ATOM 17 N3 C B1872 108.904 82.607 43.639 1.00 89.47 N
ATOM 18 C4 C B1872 108.417 83.589 42.879 1.00 88.82 C
ATOM 19 N4 C B1872 107.288 84.177 43.273 1.00 88.91 N
ATOM 20 C5 C B1872 109.066 84.011 41.685 1.00 88.70 C
ATOM 21 C6 C B1872 110.200 83.388 41.346 1.00 88.77 C
ATOM 22 P U B1873 110.562 78.897 38.094 1.00 84.66 P
ATOM 23 OP1 U B1873 111.017 77.957 37.039 1.00 84.99 O
ATOM 24 OP2 U B1873 109.562 79.945 37.752 1.00 83.57 O
ATOM 25 O5' U B1873 110.006 78.032 39.310 1.00 84.78 O
TER
ATOM 2 P C A1871 108.890 89.538 37.404 1.00 81.78 P
ATOM 3 OP1 C A1871 109.189 89.309 35.967 1.00 81.41 O
ATOM 4 OP2 C A1871 107.552 89.177 37.941 1.00 82.13 O
ATOM 5 O5' C A1871 109.987 88.798 38.296 1.00 80.74 O
ATOM 6 C5' C A1871 111.384 88.851 37.948 1.00 81.10 C
ATOM 7 C4' C A1871 112.189 87.952 38.857 1.00 82.12 C
ATOM 8 O4' C A1871 112.160 88.476 40.213 1.00 82.72 O
ATOM 9 C3' C A1871 111.674 86.532 39.010 1.00 83.01 C
ATOM 10 O3' C A1871 112.012 85.688 37.914 1.00 84.81 O
ATOM 11 C2' C A1871 112.303 86.118 40.333 1.00 83.44 C
ATOM 12 O2' C A1871 113.684 85.825 40.226 1.00 83.29 O
ATOM 13 C1' C A1871 112.123 87.402 41.147 1.00 82.80 C
ATOM 14 N1 C A1871 110.820 87.442 41.858 1.00 83.20 N
ATOM 15 C2 C A1871 110.703 86.827 43.127 1.00 82.83 C
ATOM 16 O2 C A1871 111.697 86.283 43.634 1.00 82.81 O
ATOM 17 N3 C A1871 109.506 86.847 43.763 1.00 82.90 N
ATOM 18 C4 C A1871 108.454 87.447 43.193 1.00 83.36 C
ATOM 19 N4 C A1871 107.291 87.442 43.856 1.00 82.39 N
ATOM 20 C5 C A1871 108.545 88.082 41.916 1.00 83.35 C
ATOM 21 C6 C A1871 109.733 88.057 41.293 1.00 83.25 C
ATOM 22 P C A1872 110.970 84.553 37.426 1.00 85.46 P
ATOM 23 OP1 C A1872 111.328 84.180 36.032 1.00 85.32 O
ATOM 24 OP2 C A1872 109.585 85.006 37.721 1.00 86.14 O
ATOM 25 O5' C A1872 111.298 83.317 38.374 1.00 84.42 O
TER
ATOM 1 O3' C B1871 112.012 85.688 37.914 1.00 84.81 O
ATOM 2 P C B1872 110.970 84.553 37.426 1.00 85.46 P
ATOM 3 OP1 C B1872 111.328 84.180 36.032 1.00 85.32 O
ATOM 4 OP2 C B1872 109.585 85.006 37.721 1.00 86.14 O
ATOM 5 O5' C B1872 111.298 83.317 38.374 1.00 84.42 O
ATOM 6 C5' C B1872 112.616 82.741 38.390 1.00 85.70 C
ATOM 7 C4' C B1872 112.747 81.768 39.534 1.00 86.37 C
ATOM 8 O4' C B1872 112.654 82.489 40.791 1.00 86.75 O
ATOM 9 C3' C B1872 111.647 80.724 39.624 1.00 85.60 C
ATOM 10 O3' C B1872 111.841 79.637 38.728 1.00 84.83 O
ATOM 11 C2' C B1872 111.698 80.330 41.093 1.00 85.97 C
ATOM 12 O2' C B1872 112.748 79.440 41.411 1.00 84.10 O
ATOM 13 C1' C B1872 111.964 81.691 41.744 1.00 87.65 C
ATOM 14 N1 C B1872 110.713 82.381 42.119 1.00 88.75 N
ATOM 15 C2 C B1872 110.050 81.982 43.287 1.00 89.22 C
ATOM 16 O2 C B1872 110.530 81.059 43.970 1.00 89.93 O
ATOM 17 N3 C B1872 108.904 82.607 43.639 1.00 89.47 N
ATOM 18 C4 C B1872 108.417 83.589 42.879 1.00 88.82 C
ATOM 19 N4 C B1872 107.288 84.177 43.273 1.00 88.91 N
ATOM 20 C5 C B1872 109.066 84.011 41.685 1.00 88.70 C
ATOM 21 C6 C B1872 110.200 83.388 41.346 1.00 88.77 C
ATOM 22 P U B1873 110.562 78.897 38.094 1.00 84.66 P
ATOM 23 OP1 U B1873 111.017 77.957 37.039 1.00 84.99 O
ATOM 24 OP2 U B1873 109.562 79.945 37.752 1.00 83.57 O
ATOM 25 O5' U B1873 110.006 78.032 39.310 1.00 84.78 O
TER
Atoms:
C2: (110.703,86.827,43.127)
OP1: (109.189,89.309,35.967)
OP2: (107.552,89.177,37.941)
C4: (108.454,87.447,43.193)
O5': (109.987,88.798,38.296)
C3': (111.674,86.532,39.010)
C1': (112.123,87.402,41.147)
O4': (112.160,88.476,40.213)
C5': (111.384,88.851,37.948)
P: (108.890,89.538,37.404)
O2: (111.697,86.283,43.634)
C4': (112.189,87.952,38.857)
C2': (112.303,86.118,40.333)
O2': (113.684,85.825,40.226)
N1: (110.820,87.442,41.858)
N3: (109.506,86.847,43.763)
N4: (107.291,87.442,43.856)
C6: (109.733,88.057,41.293)
C5: (108.545,88.082,41.916)
O3': (112.012,85.688,37.914)
OP1: (109.189,89.309,35.967)
OP2: (107.552,89.177,37.941)
C4: (108.454,87.447,43.193)
O5': (109.987,88.798,38.296)
C3': (111.674,86.532,39.010)
C1': (112.123,87.402,41.147)
O4': (112.160,88.476,40.213)
C5': (111.384,88.851,37.948)
P: (108.890,89.538,37.404)
O2: (111.697,86.283,43.634)
C4': (112.189,87.952,38.857)
C2': (112.303,86.118,40.333)
O2': (113.684,85.825,40.226)
N1: (110.820,87.442,41.858)
N3: (109.506,86.847,43.763)
N4: (107.291,87.442,43.856)
C6: (109.733,88.057,41.293)
C5: (108.545,88.082,41.916)
O3': (112.012,85.688,37.914)
C2: (110.050,81.982,43.287)
OP1: (111.328,84.180,36.032)
OP2: (109.585,85.006,37.721)
C4: (108.417,83.589,42.879)
O5': (111.298,83.317,38.374)
C3': (111.647,80.724,39.624)
C1': (111.964,81.691,41.744)
O4': (112.654,82.489,40.791)
C5': (112.616,82.741,38.390)
P: (110.970,84.553,37.426)
O2: (110.530,81.059,43.970)
C4': (112.747,81.768,39.534)
C2': (111.698,80.330,41.093)
O2': (112.748,79.440,41.411)
N1: (110.713,82.381,42.119)
N3: (108.904,82.607,43.639)
N4: (107.288,84.177,43.273)
C6: (110.200,83.388,41.346)
C5: (109.066,84.011,41.685)
O3': (111.841,79.637,38.728)
OP1: (111.328,84.180,36.032)
OP2: (109.585,85.006,37.721)
C4: (108.417,83.589,42.879)
O5': (111.298,83.317,38.374)
C3': (111.647,80.724,39.624)
C1': (111.964,81.691,41.744)
O4': (112.654,82.489,40.791)
C5': (112.616,82.741,38.390)
P: (110.970,84.553,37.426)
O2: (110.530,81.059,43.970)
C4': (112.747,81.768,39.534)
C2': (111.698,80.330,41.093)
O2': (112.748,79.440,41.411)
N1: (110.713,82.381,42.119)
N3: (108.904,82.607,43.639)
N4: (107.288,84.177,43.273)
C6: (110.200,83.388,41.346)
C5: (109.066,84.011,41.685)
O3': (111.841,79.637,38.728)
Image (generated by PyMOL):