ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXB:B36:B37

Extra

PDB:
ATOM 1 O3' G A 35 225.580 6.555 50.266 1.00 52.48 O
ATOM 2 P C A 36 226.897 6.587 51.190 1.00 54.41 P
ATOM 3 OP1 C A 36 226.857 7.903 51.879 1.00 55.07 O
ATOM 4 OP2 C A 36 228.094 6.222 50.385 1.00 50.84 O
ATOM 5 O5' C A 36 226.616 5.437 52.256 1.00 50.79 O
ATOM 6 C5' C A 36 225.486 5.528 53.101 1.00 48.69 C
ATOM 7 C4' C A 36 225.188 4.197 53.723 1.00 49.67 C
ATOM 8 O4' C A 36 224.740 3.258 52.714 1.00 49.49 O
ATOM 9 C3' C A 36 226.364 3.503 54.373 1.00 50.36 C
ATOM 10 O3' C A 36 226.588 4.068 55.659 1.00 52.56 O
ATOM 11 C2' C A 36 225.876 2.053 54.417 1.00 50.72 C
ATOM 12 O2' C A 36 224.968 1.767 55.467 1.00 50.42 O
ATOM 13 C1' C A 36 225.138 1.945 53.079 1.00 47.97 C
ATOM 14 N1 C A 36 226.006 1.417 52.020 1.00 44.69 N
ATOM 15 C2 C A 36 226.225 0.036 51.953 1.00 44.17 C
ATOM 16 O2 C A 36 225.649 -0.700 52.761 1.00 42.52 O
ATOM 17 N3 C A 36 227.058 -0.459 51.005 1.00 43.53 N
ATOM 18 C4 C A 36 227.647 0.370 50.140 1.00 42.14 C
ATOM 19 N4 C A 36 228.455 -0.159 49.221 1.00 42.57 N
ATOM 20 C5 C A 36 227.429 1.780 50.177 1.00 42.71 C
ATOM 21 C6 C A 36 226.607 2.255 51.122 1.00 43.92 C
ATOM 22 P C A 37 228.088 4.250 56.211 1.00 52.55 P
ATOM 23 OP1 C A 37 227.986 5.106 57.418 1.00 54.20 O
ATOM 24 OP2 C A 37 229.026 4.642 55.124 1.00 52.15 O
ATOM 25 O5' C A 37 228.467 2.775 56.659 1.00 52.94 O
TER

ATOM 1 O3' C B 36 226.588 4.068 55.659 1.00 52.56 O
ATOM 2 P C B 37 228.088 4.250 56.211 1.00 52.55 P
ATOM 3 OP1 C B 37 227.986 5.106 57.418 1.00 54.20 O
ATOM 4 OP2 C B 37 229.026 4.642 55.124 1.00 52.15 O
ATOM 5 O5' C B 37 228.467 2.775 56.659 1.00 52.94 O
ATOM 6 C5' C B 37 227.680 2.095 57.619 1.00 52.25 C
ATOM 7 C4' C B 37 228.047 0.641 57.637 1.00 52.92 C
ATOM 8 O4' C B 37 227.627 0.027 56.389 1.00 54.02 O
ATOM 9 C3' C B 37 229.534 0.349 57.696 1.00 53.34 C
ATOM 10 O3' C B 37 230.019 0.432 59.035 1.00 54.56 O
ATOM 11 C2' C B 37 229.574 -1.079 57.166 1.00 53.62 C
ATOM 12 O2' C B 37 229.156 -2.006 58.152 1.00 55.01 O
ATOM 13 C1' C B 37 228.521 -1.019 56.054 1.00 51.54 C
ATOM 14 N1 C B 37 229.085 -0.736 54.727 1.00 46.67 N
ATOM 15 C2 C B 37 229.697 -1.777 54.022 1.00 44.66 C
ATOM 16 O2 C B 37 229.731 -2.908 54.546 1.00 45.44 O
ATOM 17 N3 C B 37 230.231 -1.526 52.795 1.00 40.32 N
ATOM 18 C4 C B 37 230.160 -0.291 52.276 1.00 39.51 C
ATOM 19 N4 C B 37 230.690 -0.077 51.062 1.00 33.92 N
ATOM 20 C5 C B 37 229.540 0.784 52.978 1.00 40.41 C
ATOM 21 C6 C B 37 229.019 0.520 54.187 1.00 44.30 C
ATOM 22 P A B 38 231.583 0.720 59.306 1.00 53.94 P
ATOM 23 OP1 A B 38 231.844 0.488 60.753 1.00 54.45 O
ATOM 24 OP2 A B 38 231.931 2.029 58.687 1.00 54.12 O
ATOM 25 O5' A B 38 232.355 -0.411 58.490 1.00 51.42 O
TER

Atoms:
C2: (226.225,0.036,51.953)
OP1: (226.857,7.903,51.879)
OP2: (228.094,6.222,50.385)
C4: (227.647,0.370,50.140)
O5': (226.616,5.437,52.256)
C3': (226.364,3.503,54.373)
C1': (225.138,1.945,53.079)
O4': (224.740,3.258,52.714)
C5': (225.486,5.528,53.101)
P: (226.897,6.587,51.190)
O2: (225.649,-0.700,52.761)
C4': (225.188,4.197,53.723)
C2': (225.876,2.053,54.417)
O2': (224.968,1.767,55.467)
N1: (226.006,1.417,52.020)
N3: (227.058,-0.459,51.005)
N4: (228.455,-0.159,49.221)
C6: (226.607,2.255,51.122)
C5: (227.429,1.780,50.177)
O3': (226.588,4.068,55.659)
C2: (229.697,-1.777,54.022)
OP1: (227.986,5.106,57.418)
OP2: (229.026,4.642,55.124)
C4: (230.160,-0.291,52.276)
O5': (228.467,2.775,56.659)
C3': (229.534,0.349,57.696)
C1': (228.521,-1.019,56.054)
O4': (227.627,0.027,56.389)
C5': (227.680,2.095,57.619)
P: (228.088,4.250,56.211)
O2: (229.731,-2.908,54.546)
C4': (228.047,0.641,57.637)
C2': (229.574,-1.079,57.166)
O2': (229.156,-2.006,58.152)
N1: (229.085,-0.736,54.727)
N3: (230.231,-1.526,52.795)
N4: (230.690,-0.077,51.062)
C6: (229.019,0.520,54.187)
C5: (229.540,0.784,52.978)
O3': (230.019,0.432,59.035)
Image (generated by PyMOL):
PyMOL image
show in jmol