ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OIN:C11:C12

Extra

PDB:
ATOM 1 O3' G A 10 -2.785 -15.435 8.270 1.00 44.23 O
ATOM 2 P C A 11 -3.522 -16.863 8.212 1.00 46.43 P
ATOM 3 OP1 C A 11 -2.471 -17.910 8.157 1.00 47.94 O
ATOM 4 OP2 C A 11 -4.578 -16.809 7.176 1.00 51.80 O
ATOM 5 O5' C A 11 -4.167 -16.869 9.661 1.00 49.38 O
ATOM 6 C5' C A 11 -5.312 -17.633 9.987 1.00 52.20 C
ATOM 7 C4' C A 11 -5.783 -17.287 11.376 1.00 43.23 C
ATOM 8 O4' C A 11 -6.036 -15.861 11.482 1.00 41.68 O
ATOM 9 C3' C A 11 -7.081 -17.944 11.802 1.00 46.88 C
ATOM 10 O3' C A 11 -6.855 -19.259 12.268 1.00 48.32 O
ATOM 11 C2' C A 11 -7.603 -16.993 12.871 1.00 47.20 C
ATOM 12 O2' C A 11 -6.925 -17.209 14.106 1.00 47.53 O
ATOM 13 C1' C A 11 -7.163 -15.639 12.306 1.00 43.94 C
ATOM 14 N1 C A 11 -8.200 -14.990 11.475 1.00 48.28 N
ATOM 15 C2 C A 11 -9.264 -14.333 12.112 1.00 49.29 C
ATOM 16 O2 C A 11 -9.311 -14.338 13.349 1.00 50.26 O
ATOM 17 N3 C A 11 -10.217 -13.720 11.369 1.00 52.65 N
ATOM 18 C4 C A 11 -10.127 -13.740 10.034 1.00 56.84 C
ATOM 19 N4 C A 11 -11.085 -13.123 9.340 1.00 62.67 N
ATOM 20 C5 C A 11 -9.047 -14.388 9.357 1.00 51.36 C
ATOM 21 C6 C A 11 -8.111 -14.996 10.108 1.00 47.52 C
ATOM 22 P C A 12 -7.853 -20.456 11.863 1.00 45.34 P
ATOM 23 OP1 C A 12 -7.078 -21.695 12.105 1.00 45.49 O
ATOM 24 OP2 C A 12 -8.386 -20.205 10.503 1.00 55.95 O
ATOM 25 O5' C A 12 -9.029 -20.283 12.926 1.00 54.73 O
TER

ATOM 1 O3' C B 11 -6.855 -19.259 12.268 1.00 48.32 O
ATOM 2 P C B 12 -7.853 -20.456 11.863 1.00 45.34 P
ATOM 3 OP1 C B 12 -7.078 -21.695 12.105 1.00 45.49 O
ATOM 4 OP2 C B 12 -8.386 -20.205 10.503 1.00 55.95 O
ATOM 5 O5' C B 12 -9.029 -20.283 12.926 1.00 54.73 O
ATOM 6 C5' C B 12 -8.764 -20.267 14.321 1.00 50.26 C
ATOM 7 C4' C B 12 -9.948 -19.762 15.110 1.00 55.81 C
ATOM 8 O4' C B 12 -10.155 -18.346 14.869 1.00 57.99 O
ATOM 9 C3' C B 12 -11.286 -20.398 14.773 1.00 61.78 C
ATOM 10 O3' C B 12 -11.464 -21.630 15.445 1.00 73.35 O
ATOM 11 C2' C B 12 -12.288 -19.333 15.199 1.00 68.49 C
ATOM 12 O2' C B 12 -12.466 -19.346 16.608 1.00 77.59 O
ATOM 13 C1' C B 12 -11.536 -18.052 14.854 1.00 62.79 C
ATOM 14 N1 C B 12 -11.901 -17.480 13.541 1.00 58.23 N
ATOM 15 C2 C B 12 -13.101 -16.771 13.428 1.00 65.10 C
ATOM 16 O2 C B 12 -13.830 -16.660 14.428 1.00 67.57 O
ATOM 17 N3 C B 12 -13.435 -16.234 12.232 1.00 65.11 N
ATOM 18 C4 C B 12 -12.621 -16.380 11.179 1.00 64.31 C
ATOM 19 N4 C B 12 -12.985 -15.832 10.016 1.00 62.85 N
ATOM 20 C5 C B 12 -11.390 -17.096 11.272 1.00 55.16 C
ATOM 21 C6 C B 12 -11.074 -17.621 12.464 1.00 54.44 C
ATOM 22 P C B 13 -12.278 -22.814 14.736 1.00 63.18 P
ATOM 23 OP1 C B 13 -12.029 -24.038 15.537 1.00 69.31 O
ATOM 24 OP2 C B 13 -11.886 -22.775 13.305 1.00 50.37 O
ATOM 25 O5' C B 13 -13.789 -22.330 14.890 1.00 83.24 O
TER

Atoms:
C2: (-9.264,-14.333,12.112)
OP1: (-2.471,-17.910,8.157)
OP2: (-4.578,-16.809,7.176)
C4: (-10.127,-13.740,10.034)
O5': (-4.167,-16.869,9.661)
C3': (-7.081,-17.944,11.802)
C1': (-7.163,-15.639,12.306)
O4': (-6.036,-15.861,11.482)
C5': (-5.312,-17.633,9.987)
P: (-3.522,-16.863,8.212)
O2: (-9.311,-14.338,13.349)
C4': (-5.783,-17.287,11.376)
C2': (-7.603,-16.993,12.871)
O2': (-6.925,-17.209,14.106)
N1: (-8.200,-14.990,11.475)
N3: (-10.217,-13.720,11.369)
N4: (-11.085,-13.123,9.340)
C6: (-8.111,-14.996,10.108)
C5: (-9.047,-14.388,9.357)
O3': (-6.855,-19.259,12.268)
C2: (-13.101,-16.771,13.428)
OP1: (-7.078,-21.695,12.105)
OP2: (-8.386,-20.205,10.503)
C4: (-12.621,-16.380,11.179)
O5': (-9.029,-20.283,12.926)
C3': (-11.286,-20.398,14.773)
C1': (-11.536,-18.052,14.854)
O4': (-10.155,-18.346,14.869)
C5': (-8.764,-20.267,14.321)
P: (-7.853,-20.456,11.863)
O2: (-13.830,-16.660,14.428)
C4': (-9.948,-19.762,15.110)
C2': (-12.288,-19.333,15.199)
O2': (-12.466,-19.346,16.608)
N1: (-11.901,-17.480,13.541)
N3: (-13.435,-16.234,12.232)
N4: (-12.985,-15.832,10.016)
C6: (-11.074,-17.621,12.464)
C5: (-11.390,-17.096,11.272)
O3': (-11.464,-21.630,15.445)
Image (generated by PyMOL):
PyMOL image
show in jmol