ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0593:0594

Extra

PDB:
ATOM 1 O3' G A 592 -0.428 133.563 94.110 1.00 73.12 O
ATOM 2 P C A 593 -1.681 132.923 94.881 1.00 70.73 P
ATOM 3 OP1 C A 593 -2.812 133.890 94.776 1.00 70.57 O
ATOM 4 OP2 C A 593 -1.206 132.489 96.225 1.00 68.04 O
ATOM 5 O5' C A 593 -2.022 131.625 94.009 1.00 67.15 O
ATOM 6 C5' C A 593 -2.955 130.662 94.509 1.00 62.81 C
ATOM 7 C4' C A 593 -3.260 129.573 93.497 1.00 58.20 C
ATOM 8 O4' C A 593 -3.735 130.094 92.231 1.00 56.30 O
ATOM 9 C3' C A 593 -2.174 128.641 93.006 1.00 56.44 C
ATOM 10 O3' C A 593 -1.747 127.716 93.992 1.00 55.91 O
ATOM 11 C2' C A 593 -2.946 127.884 91.929 1.00 56.06 C
ATOM 12 O2' C A 593 -3.815 126.920 92.499 1.00 56.10 O
ATOM 13 C1' C A 593 -3.795 129.007 91.317 1.00 54.72 C
ATOM 14 N1 C A 593 -3.306 129.421 89.988 1.00 52.38 N
ATOM 15 C2 C A 593 -3.601 128.604 88.886 1.00 51.21 C
ATOM 16 O2 C A 593 -4.280 127.586 89.059 1.00 50.17 O
ATOM 17 N3 C A 593 -3.139 128.942 87.664 1.00 50.59 N
ATOM 18 C4 C A 593 -2.416 130.050 87.510 1.00 50.68 C
ATOM 19 N4 C A 593 -1.988 130.344 86.284 1.00 50.03 N
ATOM 20 C5 C A 593 -2.104 130.907 88.607 1.00 52.16 C
ATOM 21 C6 C A 593 -2.568 130.560 89.818 1.00 52.89 C
ATOM 22 P C A 594 -0.278 127.069 93.885 1.00 56.32 P
ATOM 23 OP1 C A 594 -0.002 126.422 95.195 1.00 55.28 O
ATOM 24 OP2 C A 594 0.649 128.112 93.363 1.00 56.54 O
ATOM 25 O5' C A 594 -0.406 125.932 92.779 1.00 52.05 O
TER

ATOM 1 O3' C B 593 -1.747 127.716 93.992 1.00 55.91 O
ATOM 2 P C B 594 -0.278 127.069 93.885 1.00 56.32 P
ATOM 3 OP1 C B 594 -0.002 126.422 95.195 1.00 55.28 O
ATOM 4 OP2 C B 594 0.649 128.112 93.363 1.00 56.54 O
ATOM 5 O5' C B 594 -0.406 125.932 92.779 1.00 52.05 O
ATOM 6 C5' C B 594 -0.731 124.591 93.158 1.00 48.64 C
ATOM 7 C4' C B 594 -0.626 123.664 91.973 1.00 48.30 C
ATOM 8 O4' C B 594 -1.523 124.107 90.917 1.00 46.57 O
ATOM 9 C3' C B 594 0.721 123.596 91.278 1.00 47.10 C
ATOM 10 O3' C B 594 1.655 122.785 91.972 1.00 46.74 O
ATOM 11 C2' C B 594 0.335 123.012 89.927 1.00 46.49 C
ATOM 12 O2' C B 594 0.080 121.625 89.969 1.00 45.48 O
ATOM 13 C1' C B 594 -0.974 123.754 89.657 1.00 44.74 C
ATOM 14 N1 C B 594 -0.733 124.981 88.877 1.00 42.71 N
ATOM 15 C2 C B 594 -0.537 124.860 87.502 1.00 41.12 C
ATOM 16 O2 C B 594 -0.603 123.733 86.987 1.00 41.48 O
ATOM 17 N3 C B 594 -0.278 125.967 86.769 1.00 39.94 N
ATOM 18 C4 C B 594 -0.216 127.159 87.361 1.00 39.84 C
ATOM 19 N4 C B 594 0.059 128.217 86.604 1.00 39.24 N
ATOM 20 C5 C B 594 -0.430 127.316 88.760 1.00 41.06 C
ATOM 21 C6 C B 594 -0.685 126.211 89.475 1.00 41.96 C
ATOM 22 P G B 595 3.213 123.175 91.944 1.00 47.22 P
ATOM 23 OP1 G B 595 3.954 122.221 92.816 1.00 46.46 O
ATOM 24 OP2 G B 595 3.313 124.636 92.198 1.00 45.31 O
ATOM 25 O5' G B 595 3.646 122.863 90.445 1.00 45.68 O
TER

Atoms:
C2: (-3.601,128.604,88.886)
OP1: (-2.812,133.890,94.776)
OP2: (-1.206,132.489,96.225)
C4: (-2.416,130.050,87.510)
O5': (-2.022,131.625,94.009)
C3': (-2.174,128.641,93.006)
C1': (-3.795,129.007,91.317)
O4': (-3.735,130.094,92.231)
C5': (-2.955,130.662,94.509)
P: (-1.681,132.923,94.881)
O2: (-4.280,127.586,89.059)
C4': (-3.260,129.573,93.497)
C2': (-2.946,127.884,91.929)
O2': (-3.815,126.920,92.499)
N1: (-3.306,129.421,89.988)
N3: (-3.139,128.942,87.664)
N4: (-1.988,130.344,86.284)
C6: (-2.568,130.560,89.818)
C5: (-2.104,130.907,88.607)
O3': (-1.747,127.716,93.992)
C2: (-0.537,124.860,87.502)
OP1: (-0.002,126.422,95.195)
OP2: (0.649,128.112,93.363)
C4: (-0.216,127.159,87.361)
O5': (-0.406,125.932,92.779)
C3': (0.721,123.596,91.278)
C1': (-0.974,123.754,89.657)
O4': (-1.523,124.107,90.917)
C5': (-0.731,124.591,93.158)
P: (-0.278,127.069,93.885)
O2: (-0.603,123.733,86.987)
C4': (-0.626,123.664,91.973)
C2': (0.335,123.012,89.927)
O2': (0.080,121.625,89.969)
N1: (-0.733,124.981,88.877)
N3: (-0.278,125.967,86.769)
N4: (0.059,128.217,86.604)
C6: (-0.685,126.211,89.475)
C5: (-0.430,127.316,88.760)
O3': (1.655,122.785,91.972)
Image (generated by PyMOL):
PyMOL image
show in jmol