Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:G17:G18
Extra
PDB:
ATOM 1 O3' A A 16 -15.521 -39.550 -3.963 1.00 22.47 O
ATOM 2 P C A 17 -14.735 -39.744 -5.341 1.00 27.33 P
ATOM 3 OP1 C A 17 -15.679 -40.180 -6.404 1.00 27.33 O
ATOM 4 OP2 C A 17 -13.558 -40.595 -5.000 1.00 30.54 O
ATOM 5 O5' C A 17 -14.183 -38.295 -5.707 1.00 20.92 O
ATOM 6 C5' C A 17 -15.069 -37.216 -5.934 1.00 18.71 C
ATOM 7 C4' C A 17 -14.296 -35.929 -5.986 1.00 19.20 C
ATOM 8 O4' C A 17 -13.595 -35.727 -4.726 1.00 20.34 O
ATOM 9 C3' C A 17 -13.187 -35.889 -7.019 1.00 19.57 C
ATOM 10 O3' C A 17 -13.701 -35.628 -8.317 1.00 21.83 O
ATOM 11 C2' C A 17 -12.286 -34.781 -6.482 1.00 19.06 C
ATOM 12 O2' C A 17 -12.745 -33.485 -6.795 1.00 19.40 O
ATOM 13 C1' C A 17 -12.393 -35.004 -4.967 1.00 18.22 C
ATOM 14 N1 C A 17 -11.258 -35.757 -4.402 1.00 17.13 N
ATOM 15 C2 C A 17 -9.993 -35.142 -4.359 1.00 16.98 C
ATOM 16 O2 C A 17 -9.882 -33.963 -4.755 1.00 17.79 O
ATOM 17 N3 C A 17 -8.929 -35.845 -3.891 1.00 15.01 N
ATOM 18 C4 C A 17 -9.093 -37.104 -3.473 1.00 14.76 C
ATOM 19 N4 C A 17 -8.017 -37.769 -3.046 1.00 12.17 N
ATOM 20 C5 C A 17 -10.371 -37.740 -3.480 1.00 16.46 C
ATOM 21 C6 C A 17 -11.417 -37.036 -3.945 1.00 16.81 C
ATOM 22 P C A 18 -13.041 -36.357 -9.587 1.00 23.58 P
ATOM 23 OP1 C A 18 -13.723 -35.905 -10.836 1.00 21.23 O
ATOM 24 OP2 C A 18 -12.997 -37.804 -9.256 1.00 22.77 O
ATOM 25 O5' C A 18 -11.548 -35.799 -9.601 1.00 21.24 O
TER
ATOM 1 O3' C B 17 -13.701 -35.628 -8.317 1.00 21.83 O
ATOM 2 P C B 18 -13.041 -36.357 -9.587 1.00 23.58 P
ATOM 3 OP1 C B 18 -13.723 -35.905 -10.836 1.00 21.23 O
ATOM 4 OP2 C B 18 -12.997 -37.804 -9.256 1.00 22.77 O
ATOM 5 O5' C B 18 -11.548 -35.799 -9.601 1.00 21.24 O
ATOM 6 C5' C B 18 -11.279 -34.440 -9.957 1.00 19.80 C
ATOM 7 C4' C B 18 -9.825 -34.114 -9.711 1.00 17.94 C
ATOM 8 O4' C B 18 -9.554 -34.281 -8.301 1.00 18.42 O
ATOM 9 C3' C B 18 -8.829 -35.030 -10.405 1.00 18.59 C
ATOM 10 O3' C B 18 -8.569 -34.587 -11.733 1.00 20.97 O
ATOM 11 C2' C B 18 -7.613 -34.932 -9.497 1.00 17.88 C
ATOM 12 O2' C B 18 -6.888 -33.734 -9.688 1.00 21.44 O
ATOM 13 C1' C B 18 -8.279 -34.870 -8.124 1.00 16.33 C
ATOM 14 N1 C B 18 -8.485 -36.190 -7.530 1.00 13.73 N
ATOM 15 C2 C B 18 -7.405 -36.828 -6.912 1.00 15.18 C
ATOM 16 O2 C B 18 -6.301 -36.258 -6.891 1.00 15.88 O
ATOM 17 N3 C B 18 -7.592 -38.046 -6.354 1.00 12.40 N
ATOM 18 C4 C B 18 -8.799 -38.619 -6.399 1.00 10.05 C
ATOM 19 N4 C B 18 -8.946 -39.817 -5.827 1.00 9.36 N
ATOM 20 C5 C B 18 -9.911 -37.988 -7.030 1.00 6.88 C
ATOM 21 C6 C B 18 -9.711 -36.789 -7.577 1.00 7.86 C
ATOM 22 P A B 19 -8.267 -35.660 -12.896 1.00 24.68 P
ATOM 23 OP1 A B 19 -8.066 -34.908 -14.160 1.00 26.14 O
ATOM 24 OP2 A B 19 -9.305 -36.732 -12.833 1.00 23.71 O
ATOM 25 O5' A B 19 -6.860 -36.280 -12.492 1.00 21.00 O
TER
ATOM 2 P C A 17 -14.735 -39.744 -5.341 1.00 27.33 P
ATOM 3 OP1 C A 17 -15.679 -40.180 -6.404 1.00 27.33 O
ATOM 4 OP2 C A 17 -13.558 -40.595 -5.000 1.00 30.54 O
ATOM 5 O5' C A 17 -14.183 -38.295 -5.707 1.00 20.92 O
ATOM 6 C5' C A 17 -15.069 -37.216 -5.934 1.00 18.71 C
ATOM 7 C4' C A 17 -14.296 -35.929 -5.986 1.00 19.20 C
ATOM 8 O4' C A 17 -13.595 -35.727 -4.726 1.00 20.34 O
ATOM 9 C3' C A 17 -13.187 -35.889 -7.019 1.00 19.57 C
ATOM 10 O3' C A 17 -13.701 -35.628 -8.317 1.00 21.83 O
ATOM 11 C2' C A 17 -12.286 -34.781 -6.482 1.00 19.06 C
ATOM 12 O2' C A 17 -12.745 -33.485 -6.795 1.00 19.40 O
ATOM 13 C1' C A 17 -12.393 -35.004 -4.967 1.00 18.22 C
ATOM 14 N1 C A 17 -11.258 -35.757 -4.402 1.00 17.13 N
ATOM 15 C2 C A 17 -9.993 -35.142 -4.359 1.00 16.98 C
ATOM 16 O2 C A 17 -9.882 -33.963 -4.755 1.00 17.79 O
ATOM 17 N3 C A 17 -8.929 -35.845 -3.891 1.00 15.01 N
ATOM 18 C4 C A 17 -9.093 -37.104 -3.473 1.00 14.76 C
ATOM 19 N4 C A 17 -8.017 -37.769 -3.046 1.00 12.17 N
ATOM 20 C5 C A 17 -10.371 -37.740 -3.480 1.00 16.46 C
ATOM 21 C6 C A 17 -11.417 -37.036 -3.945 1.00 16.81 C
ATOM 22 P C A 18 -13.041 -36.357 -9.587 1.00 23.58 P
ATOM 23 OP1 C A 18 -13.723 -35.905 -10.836 1.00 21.23 O
ATOM 24 OP2 C A 18 -12.997 -37.804 -9.256 1.00 22.77 O
ATOM 25 O5' C A 18 -11.548 -35.799 -9.601 1.00 21.24 O
TER
ATOM 1 O3' C B 17 -13.701 -35.628 -8.317 1.00 21.83 O
ATOM 2 P C B 18 -13.041 -36.357 -9.587 1.00 23.58 P
ATOM 3 OP1 C B 18 -13.723 -35.905 -10.836 1.00 21.23 O
ATOM 4 OP2 C B 18 -12.997 -37.804 -9.256 1.00 22.77 O
ATOM 5 O5' C B 18 -11.548 -35.799 -9.601 1.00 21.24 O
ATOM 6 C5' C B 18 -11.279 -34.440 -9.957 1.00 19.80 C
ATOM 7 C4' C B 18 -9.825 -34.114 -9.711 1.00 17.94 C
ATOM 8 O4' C B 18 -9.554 -34.281 -8.301 1.00 18.42 O
ATOM 9 C3' C B 18 -8.829 -35.030 -10.405 1.00 18.59 C
ATOM 10 O3' C B 18 -8.569 -34.587 -11.733 1.00 20.97 O
ATOM 11 C2' C B 18 -7.613 -34.932 -9.497 1.00 17.88 C
ATOM 12 O2' C B 18 -6.888 -33.734 -9.688 1.00 21.44 O
ATOM 13 C1' C B 18 -8.279 -34.870 -8.124 1.00 16.33 C
ATOM 14 N1 C B 18 -8.485 -36.190 -7.530 1.00 13.73 N
ATOM 15 C2 C B 18 -7.405 -36.828 -6.912 1.00 15.18 C
ATOM 16 O2 C B 18 -6.301 -36.258 -6.891 1.00 15.88 O
ATOM 17 N3 C B 18 -7.592 -38.046 -6.354 1.00 12.40 N
ATOM 18 C4 C B 18 -8.799 -38.619 -6.399 1.00 10.05 C
ATOM 19 N4 C B 18 -8.946 -39.817 -5.827 1.00 9.36 N
ATOM 20 C5 C B 18 -9.911 -37.988 -7.030 1.00 6.88 C
ATOM 21 C6 C B 18 -9.711 -36.789 -7.577 1.00 7.86 C
ATOM 22 P A B 19 -8.267 -35.660 -12.896 1.00 24.68 P
ATOM 23 OP1 A B 19 -8.066 -34.908 -14.160 1.00 26.14 O
ATOM 24 OP2 A B 19 -9.305 -36.732 -12.833 1.00 23.71 O
ATOM 25 O5' A B 19 -6.860 -36.280 -12.492 1.00 21.00 O
TER
Atoms:
C2: (-9.993,-35.142,-4.359)
OP1: (-15.679,-40.180,-6.404)
OP2: (-13.558,-40.595,-5.000)
C4: (-9.093,-37.104,-3.473)
O5': (-14.183,-38.295,-5.707)
C3': (-13.187,-35.889,-7.019)
C1': (-12.393,-35.004,-4.967)
O4': (-13.595,-35.727,-4.726)
C5': (-15.069,-37.216,-5.934)
P: (-14.735,-39.744,-5.341)
O2: (-9.882,-33.963,-4.755)
C4': (-14.296,-35.929,-5.986)
C2': (-12.286,-34.781,-6.482)
O2': (-12.745,-33.485,-6.795)
N1: (-11.258,-35.757,-4.402)
N3: (-8.929,-35.845,-3.891)
N4: (-8.017,-37.769,-3.046)
C6: (-11.417,-37.036,-3.945)
C5: (-10.371,-37.740,-3.480)
O3': (-13.701,-35.628,-8.317)
OP1: (-15.679,-40.180,-6.404)
OP2: (-13.558,-40.595,-5.000)
C4: (-9.093,-37.104,-3.473)
O5': (-14.183,-38.295,-5.707)
C3': (-13.187,-35.889,-7.019)
C1': (-12.393,-35.004,-4.967)
O4': (-13.595,-35.727,-4.726)
C5': (-15.069,-37.216,-5.934)
P: (-14.735,-39.744,-5.341)
O2: (-9.882,-33.963,-4.755)
C4': (-14.296,-35.929,-5.986)
C2': (-12.286,-34.781,-6.482)
O2': (-12.745,-33.485,-6.795)
N1: (-11.258,-35.757,-4.402)
N3: (-8.929,-35.845,-3.891)
N4: (-8.017,-37.769,-3.046)
C6: (-11.417,-37.036,-3.945)
C5: (-10.371,-37.740,-3.480)
O3': (-13.701,-35.628,-8.317)
C2: (-7.405,-36.828,-6.912)
OP1: (-13.723,-35.905,-10.836)
OP2: (-12.997,-37.804,-9.256)
C4: (-8.799,-38.619,-6.399)
O5': (-11.548,-35.799,-9.601)
C3': (-8.829,-35.030,-10.405)
C1': (-8.279,-34.870,-8.124)
O4': (-9.554,-34.281,-8.301)
C5': (-11.279,-34.440,-9.957)
P: (-13.041,-36.357,-9.587)
O2: (-6.301,-36.258,-6.891)
C4': (-9.825,-34.114,-9.711)
C2': (-7.613,-34.932,-9.497)
O2': (-6.888,-33.734,-9.688)
N1: (-8.485,-36.190,-7.530)
N3: (-7.592,-38.046,-6.354)
N4: (-8.946,-39.817,-5.827)
C6: (-9.711,-36.789,-7.577)
C5: (-9.911,-37.988,-7.030)
O3': (-8.569,-34.587,-11.733)
OP1: (-13.723,-35.905,-10.836)
OP2: (-12.997,-37.804,-9.256)
C4: (-8.799,-38.619,-6.399)
O5': (-11.548,-35.799,-9.601)
C3': (-8.829,-35.030,-10.405)
C1': (-8.279,-34.870,-8.124)
O4': (-9.554,-34.281,-8.301)
C5': (-11.279,-34.440,-9.957)
P: (-13.041,-36.357,-9.587)
O2: (-6.301,-36.258,-6.891)
C4': (-9.825,-34.114,-9.711)
C2': (-7.613,-34.932,-9.497)
O2': (-6.888,-33.734,-9.688)
N1: (-8.485,-36.190,-7.530)
N3: (-7.592,-38.046,-6.354)
N4: (-8.946,-39.817,-5.827)
C6: (-9.711,-36.789,-7.577)
C5: (-9.911,-37.988,-7.030)
O3': (-8.569,-34.587,-11.733)
Image (generated by PyMOL):