Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1871:1872
Extra
PDB:
ATOM 1 O3' A A 870 33.984 1.085 96.027 1.00 36.75 O
ATOM 2 P C A 871 35.334 0.383 95.525 1.00 34.00 P
ATOM 3 OP1 C A 871 35.617 0.991 94.190 1.00 33.80 O
ATOM 4 OP2 C A 871 35.161 -1.098 95.646 1.00 33.93 O
ATOM 5 O5' C A 871 36.384 0.869 96.577 1.00 34.23 O
ATOM 6 C5' C A 871 36.496 2.233 96.847 1.00 34.38 C
ATOM 7 C4' C A 871 37.041 2.449 98.205 1.00 34.67 C
ATOM 8 O4' C A 871 36.130 1.899 99.182 1.00 34.84 O
ATOM 9 C3' C A 871 38.352 1.753 98.509 1.00 34.68 C
ATOM 10 O3' C A 871 39.444 2.424 97.971 1.00 34.62 O
ATOM 11 C2' C A 871 38.359 1.749 100.004 1.00 35.00 C
ATOM 12 O2' C A 871 38.671 3.059 100.469 1.00 35.21 O
ATOM 13 C1' C A 871 36.872 1.468 100.295 1.00 35.04 C
ATOM 14 N1 C A 871 36.570 0.062 100.496 1.00 34.98 N
ATOM 15 C2 C A 871 36.879 -0.604 101.646 1.00 35.19 C
ATOM 16 O2 C A 871 37.531 -0.008 102.491 1.00 35.43 O
ATOM 17 N3 C A 871 36.484 -1.876 101.797 1.00 35.15 N
ATOM 18 C4 C A 871 35.772 -2.455 100.856 1.00 34.91 C
ATOM 19 N4 C A 871 35.383 -3.690 101.028 1.00 34.89 N
ATOM 20 C5 C A 871 35.398 -1.786 99.673 1.00 34.70 C
ATOM 21 C6 C A 871 35.811 -0.522 99.535 1.00 34.74 C
ATOM 22 P C A 872 40.614 1.596 97.281 1.00 37.91 P
ATOM 23 OP1 C A 872 41.504 2.581 96.634 1.00 37.87 O
ATOM 24 OP2 C A 872 39.971 0.549 96.436 1.00 37.66 O
ATOM 25 O5' C A 872 41.344 0.912 98.527 1.00 38.12 O
TER
ATOM 1 O3' C B 871 39.444 2.424 97.971 1.00 34.62 O
ATOM 2 P C B 872 40.614 1.596 97.281 1.00 37.91 P
ATOM 3 OP1 C B 872 41.504 2.581 96.634 1.00 37.87 O
ATOM 4 OP2 C B 872 39.971 0.549 96.436 1.00 37.66 O
ATOM 5 O5' C B 872 41.344 0.912 98.527 1.00 38.12 O
ATOM 6 C5' C B 872 42.115 1.690 99.424 1.00 38.39 C
ATOM 7 C4' C B 872 42.581 0.900 100.612 1.00 38.60 C
ATOM 8 O4' C B 872 41.456 0.353 101.333 1.00 38.71 O
ATOM 9 C3' C B 872 43.425 -0.311 100.324 1.00 38.48 C
ATOM 10 O3' C B 872 44.743 0.017 99.960 1.00 38.45 O
ATOM 11 C2' C B 872 43.330 -1.065 101.629 1.00 38.72 C
ATOM 12 O2' C B 872 44.142 -0.435 102.610 1.00 39.02 O
ATOM 13 C1' C B 872 41.863 -0.821 101.994 1.00 38.79 C
ATOM 14 N1 C B 872 40.959 -1.931 101.590 1.00 38.61 N
ATOM 15 C2 C B 872 41.012 -3.151 102.213 1.00 38.69 C
ATOM 16 O2 C B 872 41.847 -3.315 103.077 1.00 38.91 O
ATOM 17 N3 C B 872 40.197 -4.146 101.897 1.00 38.56 N
ATOM 18 C4 C B 872 39.299 -3.955 100.957 1.00 38.35 C
ATOM 19 N4 C B 872 38.466 -4.963 100.672 1.00 38.24 N
ATOM 20 C5 C B 872 39.193 -2.729 100.277 1.00 38.25 C
ATOM 21 C6 C B 872 40.030 -1.761 100.625 1.00 38.39 C
ATOM 22 P A B 873 45.404 -0.695 98.709 1.00 31.82 P
ATOM 23 OP1 A B 873 46.460 0.191 98.214 1.00 31.81 O
ATOM 24 OP2 A B 873 44.309 -1.056 97.810 1.00 31.58 O
ATOM 25 O5' A B 873 46.017 -2.009 99.347 1.00 31.91 O
TER
ATOM 2 P C A 871 35.334 0.383 95.525 1.00 34.00 P
ATOM 3 OP1 C A 871 35.617 0.991 94.190 1.00 33.80 O
ATOM 4 OP2 C A 871 35.161 -1.098 95.646 1.00 33.93 O
ATOM 5 O5' C A 871 36.384 0.869 96.577 1.00 34.23 O
ATOM 6 C5' C A 871 36.496 2.233 96.847 1.00 34.38 C
ATOM 7 C4' C A 871 37.041 2.449 98.205 1.00 34.67 C
ATOM 8 O4' C A 871 36.130 1.899 99.182 1.00 34.84 O
ATOM 9 C3' C A 871 38.352 1.753 98.509 1.00 34.68 C
ATOM 10 O3' C A 871 39.444 2.424 97.971 1.00 34.62 O
ATOM 11 C2' C A 871 38.359 1.749 100.004 1.00 35.00 C
ATOM 12 O2' C A 871 38.671 3.059 100.469 1.00 35.21 O
ATOM 13 C1' C A 871 36.872 1.468 100.295 1.00 35.04 C
ATOM 14 N1 C A 871 36.570 0.062 100.496 1.00 34.98 N
ATOM 15 C2 C A 871 36.879 -0.604 101.646 1.00 35.19 C
ATOM 16 O2 C A 871 37.531 -0.008 102.491 1.00 35.43 O
ATOM 17 N3 C A 871 36.484 -1.876 101.797 1.00 35.15 N
ATOM 18 C4 C A 871 35.772 -2.455 100.856 1.00 34.91 C
ATOM 19 N4 C A 871 35.383 -3.690 101.028 1.00 34.89 N
ATOM 20 C5 C A 871 35.398 -1.786 99.673 1.00 34.70 C
ATOM 21 C6 C A 871 35.811 -0.522 99.535 1.00 34.74 C
ATOM 22 P C A 872 40.614 1.596 97.281 1.00 37.91 P
ATOM 23 OP1 C A 872 41.504 2.581 96.634 1.00 37.87 O
ATOM 24 OP2 C A 872 39.971 0.549 96.436 1.00 37.66 O
ATOM 25 O5' C A 872 41.344 0.912 98.527 1.00 38.12 O
TER
ATOM 1 O3' C B 871 39.444 2.424 97.971 1.00 34.62 O
ATOM 2 P C B 872 40.614 1.596 97.281 1.00 37.91 P
ATOM 3 OP1 C B 872 41.504 2.581 96.634 1.00 37.87 O
ATOM 4 OP2 C B 872 39.971 0.549 96.436 1.00 37.66 O
ATOM 5 O5' C B 872 41.344 0.912 98.527 1.00 38.12 O
ATOM 6 C5' C B 872 42.115 1.690 99.424 1.00 38.39 C
ATOM 7 C4' C B 872 42.581 0.900 100.612 1.00 38.60 C
ATOM 8 O4' C B 872 41.456 0.353 101.333 1.00 38.71 O
ATOM 9 C3' C B 872 43.425 -0.311 100.324 1.00 38.48 C
ATOM 10 O3' C B 872 44.743 0.017 99.960 1.00 38.45 O
ATOM 11 C2' C B 872 43.330 -1.065 101.629 1.00 38.72 C
ATOM 12 O2' C B 872 44.142 -0.435 102.610 1.00 39.02 O
ATOM 13 C1' C B 872 41.863 -0.821 101.994 1.00 38.79 C
ATOM 14 N1 C B 872 40.959 -1.931 101.590 1.00 38.61 N
ATOM 15 C2 C B 872 41.012 -3.151 102.213 1.00 38.69 C
ATOM 16 O2 C B 872 41.847 -3.315 103.077 1.00 38.91 O
ATOM 17 N3 C B 872 40.197 -4.146 101.897 1.00 38.56 N
ATOM 18 C4 C B 872 39.299 -3.955 100.957 1.00 38.35 C
ATOM 19 N4 C B 872 38.466 -4.963 100.672 1.00 38.24 N
ATOM 20 C5 C B 872 39.193 -2.729 100.277 1.00 38.25 C
ATOM 21 C6 C B 872 40.030 -1.761 100.625 1.00 38.39 C
ATOM 22 P A B 873 45.404 -0.695 98.709 1.00 31.82 P
ATOM 23 OP1 A B 873 46.460 0.191 98.214 1.00 31.81 O
ATOM 24 OP2 A B 873 44.309 -1.056 97.810 1.00 31.58 O
ATOM 25 O5' A B 873 46.017 -2.009 99.347 1.00 31.91 O
TER
Atoms:
C2: (36.879,-0.604,101.646)
OP1: (35.617,0.991,94.190)
OP2: (35.161,-1.098,95.646)
C4: (35.772,-2.455,100.856)
O5': (36.384,0.869,96.577)
C3': (38.352,1.753,98.509)
C1': (36.872,1.468,100.295)
O4': (36.130,1.899,99.182)
C5': (36.496,2.233,96.847)
P: (35.334,0.383,95.525)
O2: (37.531,-0.008,102.491)
C4': (37.041,2.449,98.205)
C2': (38.359,1.749,100.004)
O2': (38.671,3.059,100.469)
N1: (36.570,0.062,100.496)
N3: (36.484,-1.876,101.797)
N4: (35.383,-3.690,101.028)
C6: (35.811,-0.522,99.535)
C5: (35.398,-1.786,99.673)
O3': (39.444,2.424,97.971)
OP1: (35.617,0.991,94.190)
OP2: (35.161,-1.098,95.646)
C4: (35.772,-2.455,100.856)
O5': (36.384,0.869,96.577)
C3': (38.352,1.753,98.509)
C1': (36.872,1.468,100.295)
O4': (36.130,1.899,99.182)
C5': (36.496,2.233,96.847)
P: (35.334,0.383,95.525)
O2: (37.531,-0.008,102.491)
C4': (37.041,2.449,98.205)
C2': (38.359,1.749,100.004)
O2': (38.671,3.059,100.469)
N1: (36.570,0.062,100.496)
N3: (36.484,-1.876,101.797)
N4: (35.383,-3.690,101.028)
C6: (35.811,-0.522,99.535)
C5: (35.398,-1.786,99.673)
O3': (39.444,2.424,97.971)
C2: (41.012,-3.151,102.213)
OP1: (41.504,2.581,96.634)
OP2: (39.971,0.549,96.436)
C4: (39.299,-3.955,100.957)
O5': (41.344,0.912,98.527)
C3': (43.425,-0.311,100.324)
C1': (41.863,-0.821,101.994)
O4': (41.456,0.353,101.333)
C5': (42.115,1.690,99.424)
P: (40.614,1.596,97.281)
O2: (41.847,-3.315,103.077)
C4': (42.581,0.900,100.612)
C2': (43.330,-1.065,101.629)
O2': (44.142,-0.435,102.610)
N1: (40.959,-1.931,101.590)
N3: (40.197,-4.146,101.897)
N4: (38.466,-4.963,100.672)
C6: (40.030,-1.761,100.625)
C5: (39.193,-2.729,100.277)
O3': (44.743,0.017,99.960)
OP1: (41.504,2.581,96.634)
OP2: (39.971,0.549,96.436)
C4: (39.299,-3.955,100.957)
O5': (41.344,0.912,98.527)
C3': (43.425,-0.311,100.324)
C1': (41.863,-0.821,101.994)
O4': (41.456,0.353,101.333)
C5': (42.115,1.690,99.424)
P: (40.614,1.596,97.281)
O2: (41.847,-3.315,103.077)
C4': (42.581,0.900,100.612)
C2': (43.330,-1.065,101.629)
O2': (44.142,-0.435,102.610)
N1: (40.959,-1.931,101.590)
N3: (40.197,-4.146,101.897)
N4: (38.466,-4.963,100.672)
C6: (40.030,-1.761,100.625)
C5: (39.193,-2.729,100.277)
O3': (44.743,0.017,99.960)
Image (generated by PyMOL):