Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:A5:A6
Extra
PDB:
ATOM 1 O3' A A 4 94.170 39.693 42.284 1.00157.87 O
ATOM 2 P C A 5 93.310 38.711 41.349 1.00162.58 P
ATOM 3 OP1 C A 5 91.892 39.143 41.410 1.00165.76 O
ATOM 4 OP2 C A 5 93.671 37.318 41.722 1.00163.05 O
ATOM 5 O5' C A 5 93.867 38.990 39.882 1.00159.52 O
ATOM 6 C5' C A 5 93.802 40.296 39.315 1.00149.18 C
ATOM 7 C4' C A 5 94.852 40.456 38.241 1.00144.87 C
ATOM 8 O4' C A 5 96.157 40.170 38.810 1.00149.17 O
ATOM 9 C3' C A 5 94.763 39.503 37.060 1.00140.73 C
ATOM 10 O3' C A 5 93.820 39.964 36.095 1.00138.30 O
ATOM 11 C2' C A 5 96.188 39.541 36.520 1.00142.34 C
ATOM 12 O2' C A 5 96.450 40.682 35.731 1.00129.99 O
ATOM 13 C1' C A 5 97.002 39.619 37.813 1.00147.74 C
ATOM 14 N1 C A 5 97.467 38.297 38.262 1.00152.07 N
ATOM 15 C2 C A 5 98.670 37.802 37.752 1.00152.26 C
ATOM 16 O2 C A 5 99.316 38.503 36.958 1.00151.50 O
ATOM 17 N3 C A 5 99.097 36.575 38.132 1.00152.16 N
ATOM 18 C4 C A 5 98.372 35.853 38.989 1.00152.58 C
ATOM 19 N4 C A 5 98.828 34.645 39.331 1.00150.95 N
ATOM 20 C5 C A 5 97.145 36.337 39.533 1.00153.25 C
ATOM 21 C6 C A 5 96.736 37.554 39.148 1.00153.14 C
ATOM 22 P C A 6 93.260 38.950 34.977 1.00135.50 P
ATOM 23 OP1 C A 6 92.343 39.703 34.084 1.00141.54 O
ATOM 24 OP2 C A 6 92.773 37.727 35.662 1.00137.98 O
ATOM 25 O5' C A 6 94.552 38.556 34.136 1.00129.31 O
TER
ATOM 1 O3' C B 5 93.820 39.964 36.095 1.00138.30 O
ATOM 2 P C B 6 93.260 38.950 34.977 1.00135.50 P
ATOM 3 OP1 C B 6 92.343 39.703 34.084 1.00141.54 O
ATOM 4 OP2 C B 6 92.773 37.727 35.662 1.00137.98 O
ATOM 5 O5' C B 6 94.552 38.556 34.136 1.00129.31 O
ATOM 6 C5' C B 6 95.182 39.507 33.290 1.00119.36 C
ATOM 7 C4' C B 6 96.267 38.845 32.484 1.00113.25 C
ATOM 8 O4' C B 6 97.365 38.463 33.350 1.00115.01 O
ATOM 9 C3' C B 6 95.871 37.545 31.812 1.00117.12 C
ATOM 10 O3' C B 6 95.173 37.801 30.603 1.00123.18 O
ATOM 11 C2' C B 6 97.225 36.889 31.569 1.00117.01 C
ATOM 12 O2' C B 6 97.883 37.389 30.423 1.00116.67 O
ATOM 13 C1' C B 6 97.993 37.302 32.828 1.00115.65 C
ATOM 14 N1 C B 6 98.012 36.270 33.877 1.00114.78 N
ATOM 15 C2 C B 6 98.814 35.138 33.695 1.00113.63 C
ATOM 16 O2 C B 6 99.474 35.032 32.649 1.00112.63 O
ATOM 17 N3 C B 6 98.852 34.191 34.661 1.00112.35 N
ATOM 18 C4 C B 6 98.127 34.343 35.772 1.00112.52 C
ATOM 19 N4 C B 6 98.199 33.388 36.702 1.00111.12 N
ATOM 20 C5 C B 6 97.297 35.481 35.977 1.00113.36 C
ATOM 21 C6 C B 6 97.269 36.411 35.014 1.00114.51 C
ATOM 22 P U B 7 93.877 36.929 30.235 1.00126.97 P
ATOM 23 OP1 U B 7 93.020 37.724 29.319 1.00128.06 O
ATOM 24 OP2 U B 7 93.315 36.413 31.512 1.00125.67 O
ATOM 25 O5' U B 7 94.474 35.710 29.413 1.00101.94 O
TER
ATOM 2 P C A 5 93.310 38.711 41.349 1.00162.58 P
ATOM 3 OP1 C A 5 91.892 39.143 41.410 1.00165.76 O
ATOM 4 OP2 C A 5 93.671 37.318 41.722 1.00163.05 O
ATOM 5 O5' C A 5 93.867 38.990 39.882 1.00159.52 O
ATOM 6 C5' C A 5 93.802 40.296 39.315 1.00149.18 C
ATOM 7 C4' C A 5 94.852 40.456 38.241 1.00144.87 C
ATOM 8 O4' C A 5 96.157 40.170 38.810 1.00149.17 O
ATOM 9 C3' C A 5 94.763 39.503 37.060 1.00140.73 C
ATOM 10 O3' C A 5 93.820 39.964 36.095 1.00138.30 O
ATOM 11 C2' C A 5 96.188 39.541 36.520 1.00142.34 C
ATOM 12 O2' C A 5 96.450 40.682 35.731 1.00129.99 O
ATOM 13 C1' C A 5 97.002 39.619 37.813 1.00147.74 C
ATOM 14 N1 C A 5 97.467 38.297 38.262 1.00152.07 N
ATOM 15 C2 C A 5 98.670 37.802 37.752 1.00152.26 C
ATOM 16 O2 C A 5 99.316 38.503 36.958 1.00151.50 O
ATOM 17 N3 C A 5 99.097 36.575 38.132 1.00152.16 N
ATOM 18 C4 C A 5 98.372 35.853 38.989 1.00152.58 C
ATOM 19 N4 C A 5 98.828 34.645 39.331 1.00150.95 N
ATOM 20 C5 C A 5 97.145 36.337 39.533 1.00153.25 C
ATOM 21 C6 C A 5 96.736 37.554 39.148 1.00153.14 C
ATOM 22 P C A 6 93.260 38.950 34.977 1.00135.50 P
ATOM 23 OP1 C A 6 92.343 39.703 34.084 1.00141.54 O
ATOM 24 OP2 C A 6 92.773 37.727 35.662 1.00137.98 O
ATOM 25 O5' C A 6 94.552 38.556 34.136 1.00129.31 O
TER
ATOM 1 O3' C B 5 93.820 39.964 36.095 1.00138.30 O
ATOM 2 P C B 6 93.260 38.950 34.977 1.00135.50 P
ATOM 3 OP1 C B 6 92.343 39.703 34.084 1.00141.54 O
ATOM 4 OP2 C B 6 92.773 37.727 35.662 1.00137.98 O
ATOM 5 O5' C B 6 94.552 38.556 34.136 1.00129.31 O
ATOM 6 C5' C B 6 95.182 39.507 33.290 1.00119.36 C
ATOM 7 C4' C B 6 96.267 38.845 32.484 1.00113.25 C
ATOM 8 O4' C B 6 97.365 38.463 33.350 1.00115.01 O
ATOM 9 C3' C B 6 95.871 37.545 31.812 1.00117.12 C
ATOM 10 O3' C B 6 95.173 37.801 30.603 1.00123.18 O
ATOM 11 C2' C B 6 97.225 36.889 31.569 1.00117.01 C
ATOM 12 O2' C B 6 97.883 37.389 30.423 1.00116.67 O
ATOM 13 C1' C B 6 97.993 37.302 32.828 1.00115.65 C
ATOM 14 N1 C B 6 98.012 36.270 33.877 1.00114.78 N
ATOM 15 C2 C B 6 98.814 35.138 33.695 1.00113.63 C
ATOM 16 O2 C B 6 99.474 35.032 32.649 1.00112.63 O
ATOM 17 N3 C B 6 98.852 34.191 34.661 1.00112.35 N
ATOM 18 C4 C B 6 98.127 34.343 35.772 1.00112.52 C
ATOM 19 N4 C B 6 98.199 33.388 36.702 1.00111.12 N
ATOM 20 C5 C B 6 97.297 35.481 35.977 1.00113.36 C
ATOM 21 C6 C B 6 97.269 36.411 35.014 1.00114.51 C
ATOM 22 P U B 7 93.877 36.929 30.235 1.00126.97 P
ATOM 23 OP1 U B 7 93.020 37.724 29.319 1.00128.06 O
ATOM 24 OP2 U B 7 93.315 36.413 31.512 1.00125.67 O
ATOM 25 O5' U B 7 94.474 35.710 29.413 1.00101.94 O
TER
Atoms:
C2: (98.670,37.802,37.752)
OP1: (91.892,39.143,41.410)
OP2: (93.671,37.318,41.722)
C4: (98.372,35.853,38.989)
O5': (93.867,38.990,39.882)
C3': (94.763,39.503,37.060)
C1': (97.002,39.619,37.813)
O4': (96.157,40.170,38.810)
C5': (93.802,40.296,39.315)
P: (93.310,38.711,41.349)
O2: (99.316,38.503,36.958)
C4': (94.852,40.456,38.241)
C2': (96.188,39.541,36.520)
O2': (96.450,40.682,35.731)
N1: (97.467,38.297,38.262)
N3: (99.097,36.575,38.132)
N4: (98.828,34.645,39.331)
C6: (96.736,37.554,39.148)
C5: (97.145,36.337,39.533)
O3': (93.820,39.964,36.095)
OP1: (91.892,39.143,41.410)
OP2: (93.671,37.318,41.722)
C4: (98.372,35.853,38.989)
O5': (93.867,38.990,39.882)
C3': (94.763,39.503,37.060)
C1': (97.002,39.619,37.813)
O4': (96.157,40.170,38.810)
C5': (93.802,40.296,39.315)
P: (93.310,38.711,41.349)
O2: (99.316,38.503,36.958)
C4': (94.852,40.456,38.241)
C2': (96.188,39.541,36.520)
O2': (96.450,40.682,35.731)
N1: (97.467,38.297,38.262)
N3: (99.097,36.575,38.132)
N4: (98.828,34.645,39.331)
C6: (96.736,37.554,39.148)
C5: (97.145,36.337,39.533)
O3': (93.820,39.964,36.095)
C2: (98.814,35.138,33.695)
OP1: (92.343,39.703,34.084)
OP2: (92.773,37.727,35.662)
C4: (98.127,34.343,35.772)
O5': (94.552,38.556,34.136)
C3': (95.871,37.545,31.812)
C1': (97.993,37.302,32.828)
O4': (97.365,38.463,33.350)
C5': (95.182,39.507,33.290)
P: (93.260,38.950,34.977)
O2: (99.474,35.032,32.649)
C4': (96.267,38.845,32.484)
C2': (97.225,36.889,31.569)
O2': (97.883,37.389,30.423)
N1: (98.012,36.270,33.877)
N3: (98.852,34.191,34.661)
N4: (98.199,33.388,36.702)
C6: (97.269,36.411,35.014)
C5: (97.297,35.481,35.977)
O3': (95.173,37.801,30.603)
OP1: (92.343,39.703,34.084)
OP2: (92.773,37.727,35.662)
C4: (98.127,34.343,35.772)
O5': (94.552,38.556,34.136)
C3': (95.871,37.545,31.812)
C1': (97.993,37.302,32.828)
O4': (97.365,38.463,33.350)
C5': (95.182,39.507,33.290)
P: (93.260,38.950,34.977)
O2: (99.474,35.032,32.649)
C4': (96.267,38.845,32.484)
C2': (97.225,36.889,31.569)
O2': (97.883,37.389,30.423)
N1: (98.012,36.270,33.877)
N3: (98.852,34.191,34.661)
N4: (98.199,33.388,36.702)
C6: (97.269,36.411,35.014)
C5: (97.297,35.481,35.977)
O3': (95.173,37.801,30.603)
Image (generated by PyMOL):