ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A2643:A2644

Extra

PDB:
ATOM 1 O3' C A2642 47.768 -96.231 18.001 1.00 39.93 O
ATOM 2 P C A2643 47.277 -94.759 18.367 1.00 40.29 P
ATOM 3 OP1 C A2643 47.132 -94.019 17.089 1.00 57.50 O
ATOM 4 OP2 C A2643 48.183 -94.227 19.397 1.00 42.22 O
ATOM 5 O5' C A2643 45.838 -95.031 18.995 1.00 56.43 O
ATOM 6 C5' C A2643 44.783 -95.555 18.203 1.00 42.15 C
ATOM 7 C4' C A2643 43.514 -95.651 18.994 1.00 42.55 C
ATOM 8 O4' C A2643 43.562 -96.818 19.846 1.00 46.50 O
ATOM 9 C3' C A2643 43.245 -94.499 19.943 1.00 36.06 C
ATOM 10 O3' C A2643 42.634 -93.393 19.299 1.00 41.32 O
ATOM 11 C2' C A2643 42.374 -95.146 21.019 1.00 43.56 C
ATOM 12 O2' C A2643 41.024 -95.275 20.586 1.00 47.83 O
ATOM 13 C1' C A2643 42.985 -96.536 21.096 1.00 40.09 C
ATOM 14 N1 C A2643 44.038 -96.610 22.104 1.00 42.48 N
ATOM 15 C2 C A2643 43.688 -96.854 23.417 1.00 46.92 C
ATOM 16 O2 C A2643 42.498 -96.994 23.696 1.00 45.21 O
ATOM 17 N3 C A2643 44.646 -96.922 24.350 1.00 49.17 N
ATOM 18 C4 C A2643 45.905 -96.766 23.998 1.00 43.44 C
ATOM 19 N4 C A2643 46.822 -96.835 24.942 1.00 48.35 N
ATOM 20 C5 C A2643 46.288 -96.536 22.666 1.00 47.05 C
ATOM 21 C6 C A2643 45.330 -96.459 21.748 1.00 44.12 C
ATOM 22 P C A2644 42.811 -91.912 19.891 1.00 37.53 P
ATOM 23 OP1 C A2644 42.101 -90.988 18.978 1.00 42.65 O
ATOM 24 OP2 C A2644 44.244 -91.716 20.126 1.00 44.06 O
ATOM 25 O5' C A2644 42.043 -91.979 21.270 1.00 39.73 O
TER

ATOM 1 O3' C B2643 42.634 -93.393 19.299 1.00 41.32 O
ATOM 2 P C B2644 42.811 -91.912 19.891 1.00 37.53 P
ATOM 3 OP1 C B2644 42.101 -90.988 18.978 1.00 42.65 O
ATOM 4 OP2 C B2644 44.244 -91.716 20.126 1.00 44.06 O
ATOM 5 O5' C B2644 42.043 -91.979 21.270 1.00 39.73 O
ATOM 6 C5' C B2644 40.638 -92.125 21.312 1.00 38.41 C
ATOM 7 C4' C B2644 40.162 -92.337 22.715 1.00 39.17 C
ATOM 8 O4' C B2644 40.858 -93.459 23.308 1.00 34.07 O
ATOM 9 C3' C B2644 40.415 -91.195 23.667 1.00 40.26 C
ATOM 10 O3' C B2644 39.446 -90.185 23.540 1.00 49.80 O
ATOM 11 C2' C B2644 40.421 -91.885 25.030 1.00 41.03 C
ATOM 12 O2' C B2644 39.102 -92.115 25.491 1.00 43.38 O
ATOM 13 C1' C B2644 41.044 -93.236 24.686 1.00 37.90 C
ATOM 14 N1 C B2644 42.492 -93.276 24.969 1.00 39.53 N
ATOM 15 C2 C B2644 42.979 -93.252 26.275 1.00 43.25 C
ATOM 16 O2 C B2644 42.173 -93.171 27.210 1.00 48.56 O
ATOM 17 N3 C B2644 44.312 -93.299 26.488 1.00 38.21 N
ATOM 18 C4 C B2644 45.131 -93.388 25.460 1.00 41.53 C
ATOM 19 N4 C B2644 46.428 -93.441 25.689 1.00 46.31 N
ATOM 20 C5 C B2644 44.677 -93.434 24.127 1.00 44.73 C
ATOM 21 C6 C B2644 43.363 -93.372 23.935 1.00 41.90 C
ATOM 22 P G B2645 39.798 -88.676 23.916 1.00 42.18 P
ATOM 23 OP1 G B2645 38.589 -87.861 23.618 1.00 41.40 O
ATOM 24 OP2 G B2645 41.073 -88.344 23.247 1.00 54.52 O
ATOM 25 O5' G B2645 40.011 -88.751 25.482 1.00 40.94 O
TER

Atoms:
C2: (43.688,-96.854,23.417)
OP1: (47.132,-94.019,17.089)
OP2: (48.183,-94.227,19.397)
C4: (45.905,-96.766,23.998)
O5': (45.838,-95.031,18.995)
C3': (43.245,-94.499,19.943)
C1': (42.985,-96.536,21.096)
O4': (43.562,-96.818,19.846)
C5': (44.783,-95.555,18.203)
P: (47.277,-94.759,18.367)
O2: (42.498,-96.994,23.696)
C4': (43.514,-95.651,18.994)
C2': (42.374,-95.146,21.019)
O2': (41.024,-95.275,20.586)
N1: (44.038,-96.610,22.104)
N3: (44.646,-96.922,24.350)
N4: (46.822,-96.835,24.942)
C6: (45.330,-96.459,21.748)
C5: (46.288,-96.536,22.666)
O3': (42.634,-93.393,19.299)
C2: (42.979,-93.252,26.275)
OP1: (42.101,-90.988,18.978)
OP2: (44.244,-91.716,20.126)
C4: (45.131,-93.388,25.460)
O5': (42.043,-91.979,21.270)
C3': (40.415,-91.195,23.667)
C1': (41.044,-93.236,24.686)
O4': (40.858,-93.459,23.308)
C5': (40.638,-92.125,21.312)
P: (42.811,-91.912,19.891)
O2: (42.173,-93.171,27.210)
C4': (40.162,-92.337,22.715)
C2': (40.421,-91.885,25.030)
O2': (39.102,-92.115,25.491)
N1: (42.492,-93.276,24.969)
N3: (44.312,-93.299,26.488)
N4: (46.428,-93.441,25.689)
C6: (43.363,-93.372,23.935)
C5: (44.677,-93.434,24.127)
O3': (39.446,-90.185,23.540)
Image (generated by PyMOL):
PyMOL image
show in jmol