Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NJ7:F8:F9
Extra
PDB:
ATOM 1 O3' G A 7 12.075 -33.536 17.119 1.00 22.94 O
ATOM 2 P C A 8 11.768 -33.052 18.619 1.00 22.35 P
ATOM 3 OP1 C A 8 12.517 -33.948 19.525 1.00 22.76 O
ATOM 4 OP2 C A 8 10.316 -32.924 18.853 1.00 18.89 O
ATOM 5 O5' C A 8 12.344 -31.560 18.612 1.00 18.73 O
ATOM 6 C5' C A 8 13.729 -31.287 18.465 1.00 19.81 C
ATOM 7 C4' C A 8 13.920 -29.794 18.250 1.00 22.23 C
ATOM 8 O4' C A 8 13.235 -29.422 17.031 1.00 25.36 O
ATOM 9 C3' C A 8 13.275 -28.873 19.279 1.00 19.44 C
ATOM 10 O3' C A 8 14.070 -28.785 20.483 1.00 18.33 O
ATOM 11 C2' C A 8 13.299 -27.577 18.488 1.00 19.67 C
ATOM 12 O2' C A 8 14.622 -27.091 18.325 1.00 19.68 O
ATOM 13 C1' C A 8 12.788 -28.081 17.147 1.00 21.61 C
ATOM 14 N1 C A 8 11.296 -28.021 16.998 1.00 22.05 N
ATOM 15 C2 C A 8 10.746 -26.788 16.632 1.00 22.55 C
ATOM 16 O2 C A 8 11.513 -25.829 16.459 1.00 24.65 O
ATOM 17 N3 C A 8 9.410 -26.681 16.474 1.00 22.71 N
ATOM 18 C4 C A 8 8.627 -27.742 16.672 1.00 21.79 C
ATOM 19 N4 C A 8 7.302 -27.562 16.506 1.00 21.29 N
ATOM 20 C5 C A 8 9.166 -29.014 17.062 1.00 20.84 C
ATOM 21 C6 C A 8 10.501 -29.108 17.217 1.00 19.12 C
ATOM 22 P C A 9 13.310 -28.572 21.877 1.00 23.63 P
ATOM 23 OP1 C A 9 14.354 -28.668 22.939 1.00 21.76 O
ATOM 24 OP2 C A 9 12.130 -29.453 21.924 1.00 21.39 O
ATOM 25 O5' C A 9 12.756 -27.078 21.761 1.00 22.59 O
TER
ATOM 1 O3' C B 8 14.070 -28.785 20.483 1.00 18.33 O
ATOM 2 P C B 9 13.310 -28.572 21.877 1.00 23.63 P
ATOM 3 OP1 C B 9 14.354 -28.668 22.939 1.00 21.76 O
ATOM 4 OP2 C B 9 12.130 -29.453 21.924 1.00 21.39 O
ATOM 5 O5' C B 9 12.756 -27.078 21.761 1.00 22.59 O
ATOM 6 C5' C B 9 13.697 -26.027 21.718 1.00 23.98 C
ATOM 7 C4' C B 9 13.003 -24.695 21.519 1.00 20.79 C
ATOM 8 O4' C B 9 12.353 -24.701 20.227 1.00 21.66 O
ATOM 9 C3' C B 9 11.877 -24.355 22.478 1.00 22.41 C
ATOM 10 O3' C B 9 12.406 -23.893 23.710 1.00 26.73 O
ATOM 11 C2' C B 9 11.218 -23.235 21.681 1.00 22.19 C
ATOM 12 O2' C B 9 11.972 -22.042 21.706 1.00 25.86 O
ATOM 13 C1' C B 9 11.241 -23.829 20.274 1.00 22.29 C
ATOM 14 N1 C B 9 10.008 -24.615 20.055 1.00 18.12 N
ATOM 15 C2 C B 9 8.846 -23.946 19.685 1.00 21.41 C
ATOM 16 O2 C B 9 8.884 -22.726 19.507 1.00 22.68 O
ATOM 17 N3 C B 9 7.707 -24.651 19.507 1.00 25.11 N
ATOM 18 C4 C B 9 7.690 -25.968 19.703 1.00 22.09 C
ATOM 19 N4 C B 9 6.516 -26.597 19.505 1.00 21.10 N
ATOM 20 C5 C B 9 8.866 -26.671 20.101 1.00 19.69 C
ATOM 21 C6 C B 9 9.994 -25.959 20.268 1.00 18.80 C
TER
ATOM 2 P C A 8 11.768 -33.052 18.619 1.00 22.35 P
ATOM 3 OP1 C A 8 12.517 -33.948 19.525 1.00 22.76 O
ATOM 4 OP2 C A 8 10.316 -32.924 18.853 1.00 18.89 O
ATOM 5 O5' C A 8 12.344 -31.560 18.612 1.00 18.73 O
ATOM 6 C5' C A 8 13.729 -31.287 18.465 1.00 19.81 C
ATOM 7 C4' C A 8 13.920 -29.794 18.250 1.00 22.23 C
ATOM 8 O4' C A 8 13.235 -29.422 17.031 1.00 25.36 O
ATOM 9 C3' C A 8 13.275 -28.873 19.279 1.00 19.44 C
ATOM 10 O3' C A 8 14.070 -28.785 20.483 1.00 18.33 O
ATOM 11 C2' C A 8 13.299 -27.577 18.488 1.00 19.67 C
ATOM 12 O2' C A 8 14.622 -27.091 18.325 1.00 19.68 O
ATOM 13 C1' C A 8 12.788 -28.081 17.147 1.00 21.61 C
ATOM 14 N1 C A 8 11.296 -28.021 16.998 1.00 22.05 N
ATOM 15 C2 C A 8 10.746 -26.788 16.632 1.00 22.55 C
ATOM 16 O2 C A 8 11.513 -25.829 16.459 1.00 24.65 O
ATOM 17 N3 C A 8 9.410 -26.681 16.474 1.00 22.71 N
ATOM 18 C4 C A 8 8.627 -27.742 16.672 1.00 21.79 C
ATOM 19 N4 C A 8 7.302 -27.562 16.506 1.00 21.29 N
ATOM 20 C5 C A 8 9.166 -29.014 17.062 1.00 20.84 C
ATOM 21 C6 C A 8 10.501 -29.108 17.217 1.00 19.12 C
ATOM 22 P C A 9 13.310 -28.572 21.877 1.00 23.63 P
ATOM 23 OP1 C A 9 14.354 -28.668 22.939 1.00 21.76 O
ATOM 24 OP2 C A 9 12.130 -29.453 21.924 1.00 21.39 O
ATOM 25 O5' C A 9 12.756 -27.078 21.761 1.00 22.59 O
TER
ATOM 1 O3' C B 8 14.070 -28.785 20.483 1.00 18.33 O
ATOM 2 P C B 9 13.310 -28.572 21.877 1.00 23.63 P
ATOM 3 OP1 C B 9 14.354 -28.668 22.939 1.00 21.76 O
ATOM 4 OP2 C B 9 12.130 -29.453 21.924 1.00 21.39 O
ATOM 5 O5' C B 9 12.756 -27.078 21.761 1.00 22.59 O
ATOM 6 C5' C B 9 13.697 -26.027 21.718 1.00 23.98 C
ATOM 7 C4' C B 9 13.003 -24.695 21.519 1.00 20.79 C
ATOM 8 O4' C B 9 12.353 -24.701 20.227 1.00 21.66 O
ATOM 9 C3' C B 9 11.877 -24.355 22.478 1.00 22.41 C
ATOM 10 O3' C B 9 12.406 -23.893 23.710 1.00 26.73 O
ATOM 11 C2' C B 9 11.218 -23.235 21.681 1.00 22.19 C
ATOM 12 O2' C B 9 11.972 -22.042 21.706 1.00 25.86 O
ATOM 13 C1' C B 9 11.241 -23.829 20.274 1.00 22.29 C
ATOM 14 N1 C B 9 10.008 -24.615 20.055 1.00 18.12 N
ATOM 15 C2 C B 9 8.846 -23.946 19.685 1.00 21.41 C
ATOM 16 O2 C B 9 8.884 -22.726 19.507 1.00 22.68 O
ATOM 17 N3 C B 9 7.707 -24.651 19.507 1.00 25.11 N
ATOM 18 C4 C B 9 7.690 -25.968 19.703 1.00 22.09 C
ATOM 19 N4 C B 9 6.516 -26.597 19.505 1.00 21.10 N
ATOM 20 C5 C B 9 8.866 -26.671 20.101 1.00 19.69 C
ATOM 21 C6 C B 9 9.994 -25.959 20.268 1.00 18.80 C
TER
Atoms:
C2: (10.746,-26.788,16.632)
OP1: (12.517,-33.948,19.525)
OP2: (10.316,-32.924,18.853)
C4: (8.627,-27.742,16.672)
O5': (12.344,-31.560,18.612)
C3': (13.275,-28.873,19.279)
C1': (12.788,-28.081,17.147)
O4': (13.235,-29.422,17.031)
C5': (13.729,-31.287,18.465)
P: (11.768,-33.052,18.619)
O2: (11.513,-25.829,16.459)
C4': (13.920,-29.794,18.250)
C2': (13.299,-27.577,18.488)
O2': (14.622,-27.091,18.325)
N1: (11.296,-28.021,16.998)
N3: (9.410,-26.681,16.474)
N4: (7.302,-27.562,16.506)
C6: (10.501,-29.108,17.217)
C5: (9.166,-29.014,17.062)
O3': (14.070,-28.785,20.483)
OP1: (12.517,-33.948,19.525)
OP2: (10.316,-32.924,18.853)
C4: (8.627,-27.742,16.672)
O5': (12.344,-31.560,18.612)
C3': (13.275,-28.873,19.279)
C1': (12.788,-28.081,17.147)
O4': (13.235,-29.422,17.031)
C5': (13.729,-31.287,18.465)
P: (11.768,-33.052,18.619)
O2: (11.513,-25.829,16.459)
C4': (13.920,-29.794,18.250)
C2': (13.299,-27.577,18.488)
O2': (14.622,-27.091,18.325)
N1: (11.296,-28.021,16.998)
N3: (9.410,-26.681,16.474)
N4: (7.302,-27.562,16.506)
C6: (10.501,-29.108,17.217)
C5: (9.166,-29.014,17.062)
O3': (14.070,-28.785,20.483)
C2: (8.846,-23.946,19.685)
OP1: (14.354,-28.668,22.939)
OP2: (12.130,-29.453,21.924)
C4: (7.690,-25.968,19.703)
O5': (12.756,-27.078,21.761)
C3': (11.877,-24.355,22.478)
C1': (11.241,-23.829,20.274)
O4': (12.353,-24.701,20.227)
C5': (13.697,-26.027,21.718)
P: (13.310,-28.572,21.877)
O2: (8.884,-22.726,19.507)
C4': (13.003,-24.695,21.519)
C2': (11.218,-23.235,21.681)
O2': (11.972,-22.042,21.706)
N1: (10.008,-24.615,20.055)
N3: (7.707,-24.651,19.507)
N4: (6.516,-26.597,19.505)
C6: (9.994,-25.959,20.268)
C5: (8.866,-26.671,20.101)
O3': (12.406,-23.893,23.710)
OP1: (14.354,-28.668,22.939)
OP2: (12.130,-29.453,21.924)
C4: (7.690,-25.968,19.703)
O5': (12.756,-27.078,21.761)
C3': (11.877,-24.355,22.478)
C1': (11.241,-23.829,20.274)
O4': (12.353,-24.701,20.227)
C5': (13.697,-26.027,21.718)
P: (13.310,-28.572,21.877)
O2: (8.884,-22.726,19.507)
C4': (13.003,-24.695,21.519)
C2': (11.218,-23.235,21.681)
O2': (11.972,-22.042,21.706)
N1: (10.008,-24.615,20.055)
N3: (7.707,-24.651,19.507)
N4: (6.516,-26.597,19.505)
C6: (9.994,-25.959,20.268)
C5: (8.866,-26.671,20.101)
O3': (12.406,-23.893,23.710)
Image (generated by PyMOL):