Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:D2:D3
Extra
PDB:
ATOM 1 O3' G A 1 -23.693 28.584 110.081 1.00155.83 O
ATOM 2 P C A 2 -22.097 28.703 110.163 1.00154.60 P
ATOM 3 OP1 C A 2 -21.505 27.602 109.361 1.00155.14 O
ATOM 4 OP2 C A 2 -21.734 28.845 111.597 1.00152.76 O
ATOM 5 O5' C A 2 -21.789 30.082 109.436 1.00151.70 O
ATOM 6 C5' C A 2 -21.977 30.218 108.035 1.00154.62 C
ATOM 7 C4' C A 2 -21.968 31.674 107.656 1.00157.65 C
ATOM 8 O4' C A 2 -23.114 32.327 108.261 1.00157.31 O
ATOM 9 C3' C A 2 -20.784 32.466 108.183 1.00159.80 C
ATOM 10 O3' C A 2 -19.639 32.312 107.356 1.00163.13 O
ATOM 11 C2' C A 2 -21.324 33.888 108.166 1.00158.59 C
ATOM 12 O2' C A 2 -21.293 34.476 106.880 1.00154.87 O
ATOM 13 C1' C A 2 -22.771 33.658 108.607 1.00159.00 C
ATOM 14 N1 C A 2 -22.948 33.827 110.057 1.00158.72 N
ATOM 15 C2 C A 2 -23.054 35.121 110.559 1.00159.41 C
ATOM 16 O2 C A 2 -23.008 36.071 109.763 1.00161.51 O
ATOM 17 N3 C A 2 -23.203 35.307 111.891 1.00157.87 N
ATOM 18 C4 C A 2 -23.250 34.255 112.709 1.00154.93 C
ATOM 19 N4 C A 2 -23.397 34.491 114.017 1.00153.09 N
ATOM 20 C5 C A 2 -23.149 32.918 112.223 1.00154.58 C
ATOM 21 C6 C A 2 -23.001 32.751 110.901 1.00156.82 C
ATOM 22 P C A 3 -18.176 32.326 108.020 1.00165.69 P
ATOM 23 OP1 C A 3 -17.196 31.837 107.016 1.00167.38 O
ATOM 24 OP2 C A 3 -18.275 31.650 109.340 1.00163.02 O
ATOM 25 O5' C A 3 -17.894 33.869 108.278 1.00158.77 O
TER
ATOM 1 O3' C B 2 -19.639 32.312 107.356 1.00163.13 O
ATOM 2 P C B 3 -18.176 32.326 108.020 1.00165.69 P
ATOM 3 OP1 C B 3 -17.196 31.837 107.016 1.00167.38 O
ATOM 4 OP2 C B 3 -18.275 31.650 109.340 1.00163.02 O
ATOM 5 O5' C B 3 -17.894 33.869 108.278 1.00158.77 O
ATOM 6 C5' C B 3 -17.627 34.748 107.193 1.00153.48 C
ATOM 7 C4' C B 3 -17.436 36.153 107.701 1.00154.80 C
ATOM 8 O4' C B 3 -18.680 36.616 108.293 1.00152.15 O
ATOM 9 C3' C B 3 -16.428 36.310 108.828 1.00156.88 C
ATOM 10 O3' C B 3 -15.089 36.362 108.350 1.00151.43 O
ATOM 11 C2' C B 3 -16.871 37.624 109.456 1.00156.34 C
ATOM 12 O2' C B 3 -16.441 38.756 108.726 1.00157.14 O
ATOM 13 C1' C B 3 -18.394 37.491 109.373 1.00153.06 C
ATOM 14 N1 C B 3 -18.963 36.924 110.606 1.00150.40 N
ATOM 15 C2 C B 3 -19.369 37.801 111.612 1.00150.09 C
ATOM 16 O2 C B 3 -19.264 39.023 111.416 1.00149.80 O
ATOM 17 N3 C B 3 -19.865 37.302 112.769 1.00149.03 N
ATOM 18 C4 C B 3 -19.966 35.981 112.936 1.00147.85 C
ATOM 19 N4 C B 3 -20.455 35.535 114.098 1.00146.74 N
ATOM 20 C5 C B 3 -19.570 35.061 111.920 1.00146.74 C
ATOM 21 C6 C B 3 -19.081 35.571 110.780 1.00148.25 C
ATOM 22 P A B 4 -13.891 35.856 109.295 1.00147.66 P
ATOM 23 OP1 A B 4 -12.673 35.702 108.461 1.00147.72 O
ATOM 24 OP2 A B 4 -14.395 34.699 110.077 1.00145.99 O
ATOM 25 O5' A B 4 -13.659 37.070 110.300 1.00149.68 O
TER
ATOM 2 P C A 2 -22.097 28.703 110.163 1.00154.60 P
ATOM 3 OP1 C A 2 -21.505 27.602 109.361 1.00155.14 O
ATOM 4 OP2 C A 2 -21.734 28.845 111.597 1.00152.76 O
ATOM 5 O5' C A 2 -21.789 30.082 109.436 1.00151.70 O
ATOM 6 C5' C A 2 -21.977 30.218 108.035 1.00154.62 C
ATOM 7 C4' C A 2 -21.968 31.674 107.656 1.00157.65 C
ATOM 8 O4' C A 2 -23.114 32.327 108.261 1.00157.31 O
ATOM 9 C3' C A 2 -20.784 32.466 108.183 1.00159.80 C
ATOM 10 O3' C A 2 -19.639 32.312 107.356 1.00163.13 O
ATOM 11 C2' C A 2 -21.324 33.888 108.166 1.00158.59 C
ATOM 12 O2' C A 2 -21.293 34.476 106.880 1.00154.87 O
ATOM 13 C1' C A 2 -22.771 33.658 108.607 1.00159.00 C
ATOM 14 N1 C A 2 -22.948 33.827 110.057 1.00158.72 N
ATOM 15 C2 C A 2 -23.054 35.121 110.559 1.00159.41 C
ATOM 16 O2 C A 2 -23.008 36.071 109.763 1.00161.51 O
ATOM 17 N3 C A 2 -23.203 35.307 111.891 1.00157.87 N
ATOM 18 C4 C A 2 -23.250 34.255 112.709 1.00154.93 C
ATOM 19 N4 C A 2 -23.397 34.491 114.017 1.00153.09 N
ATOM 20 C5 C A 2 -23.149 32.918 112.223 1.00154.58 C
ATOM 21 C6 C A 2 -23.001 32.751 110.901 1.00156.82 C
ATOM 22 P C A 3 -18.176 32.326 108.020 1.00165.69 P
ATOM 23 OP1 C A 3 -17.196 31.837 107.016 1.00167.38 O
ATOM 24 OP2 C A 3 -18.275 31.650 109.340 1.00163.02 O
ATOM 25 O5' C A 3 -17.894 33.869 108.278 1.00158.77 O
TER
ATOM 1 O3' C B 2 -19.639 32.312 107.356 1.00163.13 O
ATOM 2 P C B 3 -18.176 32.326 108.020 1.00165.69 P
ATOM 3 OP1 C B 3 -17.196 31.837 107.016 1.00167.38 O
ATOM 4 OP2 C B 3 -18.275 31.650 109.340 1.00163.02 O
ATOM 5 O5' C B 3 -17.894 33.869 108.278 1.00158.77 O
ATOM 6 C5' C B 3 -17.627 34.748 107.193 1.00153.48 C
ATOM 7 C4' C B 3 -17.436 36.153 107.701 1.00154.80 C
ATOM 8 O4' C B 3 -18.680 36.616 108.293 1.00152.15 O
ATOM 9 C3' C B 3 -16.428 36.310 108.828 1.00156.88 C
ATOM 10 O3' C B 3 -15.089 36.362 108.350 1.00151.43 O
ATOM 11 C2' C B 3 -16.871 37.624 109.456 1.00156.34 C
ATOM 12 O2' C B 3 -16.441 38.756 108.726 1.00157.14 O
ATOM 13 C1' C B 3 -18.394 37.491 109.373 1.00153.06 C
ATOM 14 N1 C B 3 -18.963 36.924 110.606 1.00150.40 N
ATOM 15 C2 C B 3 -19.369 37.801 111.612 1.00150.09 C
ATOM 16 O2 C B 3 -19.264 39.023 111.416 1.00149.80 O
ATOM 17 N3 C B 3 -19.865 37.302 112.769 1.00149.03 N
ATOM 18 C4 C B 3 -19.966 35.981 112.936 1.00147.85 C
ATOM 19 N4 C B 3 -20.455 35.535 114.098 1.00146.74 N
ATOM 20 C5 C B 3 -19.570 35.061 111.920 1.00146.74 C
ATOM 21 C6 C B 3 -19.081 35.571 110.780 1.00148.25 C
ATOM 22 P A B 4 -13.891 35.856 109.295 1.00147.66 P
ATOM 23 OP1 A B 4 -12.673 35.702 108.461 1.00147.72 O
ATOM 24 OP2 A B 4 -14.395 34.699 110.077 1.00145.99 O
ATOM 25 O5' A B 4 -13.659 37.070 110.300 1.00149.68 O
TER
Atoms:
C2: (-23.054,35.121,110.559)
OP1: (-21.505,27.602,109.361)
OP2: (-21.734,28.845,111.597)
C4: (-23.250,34.255,112.709)
O5': (-21.789,30.082,109.436)
C3': (-20.784,32.466,108.183)
C1': (-22.771,33.658,108.607)
O4': (-23.114,32.327,108.261)
C5': (-21.977,30.218,108.035)
P: (-22.097,28.703,110.163)
O2: (-23.008,36.071,109.763)
C4': (-21.968,31.674,107.656)
C2': (-21.324,33.888,108.166)
O2': (-21.293,34.476,106.880)
N1: (-22.948,33.827,110.057)
N3: (-23.203,35.307,111.891)
N4: (-23.397,34.491,114.017)
C6: (-23.001,32.751,110.901)
C5: (-23.149,32.918,112.223)
O3': (-19.639,32.312,107.356)
OP1: (-21.505,27.602,109.361)
OP2: (-21.734,28.845,111.597)
C4: (-23.250,34.255,112.709)
O5': (-21.789,30.082,109.436)
C3': (-20.784,32.466,108.183)
C1': (-22.771,33.658,108.607)
O4': (-23.114,32.327,108.261)
C5': (-21.977,30.218,108.035)
P: (-22.097,28.703,110.163)
O2: (-23.008,36.071,109.763)
C4': (-21.968,31.674,107.656)
C2': (-21.324,33.888,108.166)
O2': (-21.293,34.476,106.880)
N1: (-22.948,33.827,110.057)
N3: (-23.203,35.307,111.891)
N4: (-23.397,34.491,114.017)
C6: (-23.001,32.751,110.901)
C5: (-23.149,32.918,112.223)
O3': (-19.639,32.312,107.356)
C2: (-19.369,37.801,111.612)
OP1: (-17.196,31.837,107.016)
OP2: (-18.275,31.650,109.340)
C4: (-19.966,35.981,112.936)
O5': (-17.894,33.869,108.278)
C3': (-16.428,36.310,108.828)
C1': (-18.394,37.491,109.373)
O4': (-18.680,36.616,108.293)
C5': (-17.627,34.748,107.193)
P: (-18.176,32.326,108.020)
O2: (-19.264,39.023,111.416)
C4': (-17.436,36.153,107.701)
C2': (-16.871,37.624,109.456)
O2': (-16.441,38.756,108.726)
N1: (-18.963,36.924,110.606)
N3: (-19.865,37.302,112.769)
N4: (-20.455,35.535,114.098)
C6: (-19.081,35.571,110.780)
C5: (-19.570,35.061,111.920)
O3': (-15.089,36.362,108.350)
OP1: (-17.196,31.837,107.016)
OP2: (-18.275,31.650,109.340)
C4: (-19.966,35.981,112.936)
O5': (-17.894,33.869,108.278)
C3': (-16.428,36.310,108.828)
C1': (-18.394,37.491,109.373)
O4': (-18.680,36.616,108.293)
C5': (-17.627,34.748,107.193)
P: (-18.176,32.326,108.020)
O2: (-19.264,39.023,111.416)
C4': (-17.436,36.153,107.701)
C2': (-16.871,37.624,109.456)
O2': (-16.441,38.756,108.726)
N1: (-18.963,36.924,110.606)
N3: (-19.865,37.302,112.769)
N4: (-20.455,35.535,114.098)
C6: (-19.081,35.571,110.780)
C5: (-19.570,35.061,111.920)
O3': (-15.089,36.362,108.350)
Image (generated by PyMOL):