Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:9106:9107
Extra
PDB:
ATOM 1 O3' U A 105 55.495 52.706 127.004 1.00 69.87 O
ATOM 2 P C A 106 55.215 51.124 127.083 1.00 72.29 P
ATOM 3 OP1 C A 106 56.372 50.534 127.805 1.00 71.80 O
ATOM 4 OP2 C A 106 54.856 50.608 125.737 1.00 69.83 O
ATOM 5 O5' C A 106 53.928 51.040 128.019 1.00 72.06 O
ATOM 6 C5' C A 106 53.940 51.636 129.335 1.00 73.70 C
ATOM 7 C4' C A 106 52.607 51.440 130.020 1.00 75.83 C
ATOM 8 O4' C A 106 51.595 52.316 129.450 1.00 75.15 O
ATOM 9 C3' C A 106 51.999 50.053 129.897 1.00 77.76 C
ATOM 10 O3' C A 106 52.613 49.115 130.780 1.00 79.48 O
ATOM 11 C2' C A 106 50.532 50.323 130.211 1.00 76.74 C
ATOM 12 O2' C A 106 50.284 50.439 131.598 1.00 76.54 O
ATOM 13 C1' C A 106 50.325 51.685 129.535 1.00 75.15 C
ATOM 14 N1 C A 106 49.737 51.586 128.180 1.00 74.93 N
ATOM 15 C2 C A 106 48.340 51.675 128.048 1.00 75.00 C
ATOM 16 O2 C A 106 47.648 51.850 129.066 1.00 76.63 O
ATOM 17 N3 C A 106 47.780 51.567 126.816 1.00 73.46 N
ATOM 18 C4 C A 106 48.554 51.385 125.744 1.00 71.96 C
ATOM 19 N4 C A 106 47.956 51.286 124.554 1.00 69.67 N
ATOM 20 C5 C A 106 49.974 51.297 125.846 1.00 71.92 C
ATOM 21 C6 C A 106 50.520 51.403 127.070 1.00 73.94 C
ATOM 22 P C A 107 52.541 47.541 130.449 1.00 80.94 P
ATOM 23 OP1 C A 107 53.252 46.856 131.562 1.00 80.48 O
ATOM 24 OP2 C A 107 52.954 47.276 129.043 1.00 79.48 O
ATOM 25 O5' C A 107 50.985 47.224 130.559 1.00 79.49 O
TER
ATOM 1 O3' C B 106 52.613 49.115 130.780 1.00 79.48 O
ATOM 2 P C B 107 52.541 47.541 130.449 1.00 80.94 P
ATOM 3 OP1 C B 107 53.252 46.856 131.562 1.00 80.48 O
ATOM 4 OP2 C B 107 52.954 47.276 129.043 1.00 79.48 O
ATOM 5 O5' C B 107 50.985 47.224 130.559 1.00 79.49 O
ATOM 6 C5' C B 107 50.306 47.337 131.819 1.00 78.14 C
ATOM 7 C4' C B 107 48.852 46.985 131.660 1.00 78.35 C
ATOM 8 O4' C B 107 48.159 48.033 130.930 1.00 78.05 O
ATOM 9 C3' C B 107 48.574 45.747 130.831 1.00 78.54 C
ATOM 10 O3' C B 107 48.808 44.534 131.519 1.00 78.84 O
ATOM 11 C2' C B 107 47.123 45.957 130.433 1.00 78.81 C
ATOM 12 O2' C B 107 46.205 45.655 131.465 1.00 78.37 O
ATOM 13 C1' C B 107 47.124 47.459 130.143 1.00 78.24 C
ATOM 14 N1 C B 107 47.413 47.715 128.722 1.00 77.99 N
ATOM 15 C2 C B 107 46.344 47.809 127.822 1.00 78.37 C
ATOM 16 O2 C B 107 45.182 47.712 128.251 1.00 78.92 O
ATOM 17 N3 C B 107 46.602 48.001 126.509 1.00 78.08 N
ATOM 18 C4 C B 107 47.860 48.104 126.084 1.00 77.35 C
ATOM 19 N4 C B 107 48.064 48.276 124.778 1.00 77.04 N
ATOM 20 C5 C B 107 48.966 48.032 126.979 1.00 78.08 C
ATOM 21 C6 C B 107 48.701 47.840 128.276 1.00 78.07 C
ATOM 22 P G B 108 49.204 43.227 130.677 1.00 80.51 P
ATOM 23 OP1 G B 108 49.527 42.142 131.637 1.00 82.26 O
ATOM 24 OP2 G B 108 50.205 43.619 129.653 1.00 82.13 O
ATOM 25 O5' G B 108 47.851 42.850 129.926 1.00 80.54 O
TER
ATOM 2 P C A 106 55.215 51.124 127.083 1.00 72.29 P
ATOM 3 OP1 C A 106 56.372 50.534 127.805 1.00 71.80 O
ATOM 4 OP2 C A 106 54.856 50.608 125.737 1.00 69.83 O
ATOM 5 O5' C A 106 53.928 51.040 128.019 1.00 72.06 O
ATOM 6 C5' C A 106 53.940 51.636 129.335 1.00 73.70 C
ATOM 7 C4' C A 106 52.607 51.440 130.020 1.00 75.83 C
ATOM 8 O4' C A 106 51.595 52.316 129.450 1.00 75.15 O
ATOM 9 C3' C A 106 51.999 50.053 129.897 1.00 77.76 C
ATOM 10 O3' C A 106 52.613 49.115 130.780 1.00 79.48 O
ATOM 11 C2' C A 106 50.532 50.323 130.211 1.00 76.74 C
ATOM 12 O2' C A 106 50.284 50.439 131.598 1.00 76.54 O
ATOM 13 C1' C A 106 50.325 51.685 129.535 1.00 75.15 C
ATOM 14 N1 C A 106 49.737 51.586 128.180 1.00 74.93 N
ATOM 15 C2 C A 106 48.340 51.675 128.048 1.00 75.00 C
ATOM 16 O2 C A 106 47.648 51.850 129.066 1.00 76.63 O
ATOM 17 N3 C A 106 47.780 51.567 126.816 1.00 73.46 N
ATOM 18 C4 C A 106 48.554 51.385 125.744 1.00 71.96 C
ATOM 19 N4 C A 106 47.956 51.286 124.554 1.00 69.67 N
ATOM 20 C5 C A 106 49.974 51.297 125.846 1.00 71.92 C
ATOM 21 C6 C A 106 50.520 51.403 127.070 1.00 73.94 C
ATOM 22 P C A 107 52.541 47.541 130.449 1.00 80.94 P
ATOM 23 OP1 C A 107 53.252 46.856 131.562 1.00 80.48 O
ATOM 24 OP2 C A 107 52.954 47.276 129.043 1.00 79.48 O
ATOM 25 O5' C A 107 50.985 47.224 130.559 1.00 79.49 O
TER
ATOM 1 O3' C B 106 52.613 49.115 130.780 1.00 79.48 O
ATOM 2 P C B 107 52.541 47.541 130.449 1.00 80.94 P
ATOM 3 OP1 C B 107 53.252 46.856 131.562 1.00 80.48 O
ATOM 4 OP2 C B 107 52.954 47.276 129.043 1.00 79.48 O
ATOM 5 O5' C B 107 50.985 47.224 130.559 1.00 79.49 O
ATOM 6 C5' C B 107 50.306 47.337 131.819 1.00 78.14 C
ATOM 7 C4' C B 107 48.852 46.985 131.660 1.00 78.35 C
ATOM 8 O4' C B 107 48.159 48.033 130.930 1.00 78.05 O
ATOM 9 C3' C B 107 48.574 45.747 130.831 1.00 78.54 C
ATOM 10 O3' C B 107 48.808 44.534 131.519 1.00 78.84 O
ATOM 11 C2' C B 107 47.123 45.957 130.433 1.00 78.81 C
ATOM 12 O2' C B 107 46.205 45.655 131.465 1.00 78.37 O
ATOM 13 C1' C B 107 47.124 47.459 130.143 1.00 78.24 C
ATOM 14 N1 C B 107 47.413 47.715 128.722 1.00 77.99 N
ATOM 15 C2 C B 107 46.344 47.809 127.822 1.00 78.37 C
ATOM 16 O2 C B 107 45.182 47.712 128.251 1.00 78.92 O
ATOM 17 N3 C B 107 46.602 48.001 126.509 1.00 78.08 N
ATOM 18 C4 C B 107 47.860 48.104 126.084 1.00 77.35 C
ATOM 19 N4 C B 107 48.064 48.276 124.778 1.00 77.04 N
ATOM 20 C5 C B 107 48.966 48.032 126.979 1.00 78.08 C
ATOM 21 C6 C B 107 48.701 47.840 128.276 1.00 78.07 C
ATOM 22 P G B 108 49.204 43.227 130.677 1.00 80.51 P
ATOM 23 OP1 G B 108 49.527 42.142 131.637 1.00 82.26 O
ATOM 24 OP2 G B 108 50.205 43.619 129.653 1.00 82.13 O
ATOM 25 O5' G B 108 47.851 42.850 129.926 1.00 80.54 O
TER
Atoms:
C2: (48.340,51.675,128.048)
OP1: (56.372,50.534,127.805)
OP2: (54.856,50.608,125.737)
C4: (48.554,51.385,125.744)
O5': (53.928,51.040,128.019)
C3': (51.999,50.053,129.897)
C1': (50.325,51.685,129.535)
O4': (51.595,52.316,129.450)
C5': (53.940,51.636,129.335)
P: (55.215,51.124,127.083)
O2: (47.648,51.850,129.066)
C4': (52.607,51.440,130.020)
C2': (50.532,50.323,130.211)
O2': (50.284,50.439,131.598)
N1: (49.737,51.586,128.180)
N3: (47.780,51.567,126.816)
N4: (47.956,51.286,124.554)
C6: (50.520,51.403,127.070)
C5: (49.974,51.297,125.846)
O3': (52.613,49.115,130.780)
OP1: (56.372,50.534,127.805)
OP2: (54.856,50.608,125.737)
C4: (48.554,51.385,125.744)
O5': (53.928,51.040,128.019)
C3': (51.999,50.053,129.897)
C1': (50.325,51.685,129.535)
O4': (51.595,52.316,129.450)
C5': (53.940,51.636,129.335)
P: (55.215,51.124,127.083)
O2: (47.648,51.850,129.066)
C4': (52.607,51.440,130.020)
C2': (50.532,50.323,130.211)
O2': (50.284,50.439,131.598)
N1: (49.737,51.586,128.180)
N3: (47.780,51.567,126.816)
N4: (47.956,51.286,124.554)
C6: (50.520,51.403,127.070)
C5: (49.974,51.297,125.846)
O3': (52.613,49.115,130.780)
C2: (46.344,47.809,127.822)
OP1: (53.252,46.856,131.562)
OP2: (52.954,47.276,129.043)
C4: (47.860,48.104,126.084)
O5': (50.985,47.224,130.559)
C3': (48.574,45.747,130.831)
C1': (47.124,47.459,130.143)
O4': (48.159,48.033,130.930)
C5': (50.306,47.337,131.819)
P: (52.541,47.541,130.449)
O2: (45.182,47.712,128.251)
C4': (48.852,46.985,131.660)
C2': (47.123,45.957,130.433)
O2': (46.205,45.655,131.465)
N1: (47.413,47.715,128.722)
N3: (46.602,48.001,126.509)
N4: (48.064,48.276,124.778)
C6: (48.701,47.840,128.276)
C5: (48.966,48.032,126.979)
O3': (48.808,44.534,131.519)
OP1: (53.252,46.856,131.562)
OP2: (52.954,47.276,129.043)
C4: (47.860,48.104,126.084)
O5': (50.985,47.224,130.559)
C3': (48.574,45.747,130.831)
C1': (47.124,47.459,130.143)
O4': (48.159,48.033,130.930)
C5': (50.306,47.337,131.819)
P: (52.541,47.541,130.449)
O2: (45.182,47.712,128.251)
C4': (48.852,46.985,131.660)
C2': (47.123,45.957,130.433)
O2': (46.205,45.655,131.465)
N1: (47.413,47.715,128.722)
N3: (46.602,48.001,126.509)
N4: (48.064,48.276,124.778)
C6: (48.701,47.840,128.276)
C5: (48.966,48.032,126.979)
O3': (48.808,44.534,131.519)
Image (generated by PyMOL):