Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0735:0736
Extra
PDB:
ATOM 1 O3' G A 734 41.135 82.798 44.330 1.00 39.44 O
ATOM 2 P C A 735 41.557 84.217 44.959 1.00 37.41 P
ATOM 3 OP1 C A 735 43.036 84.186 45.076 1.00 34.06 O
ATOM 4 OP2 C A 735 40.725 84.489 46.166 1.00 36.17 O
ATOM 5 O5' C A 735 41.130 85.283 43.858 1.00 35.48 O
ATOM 6 C5' C A 735 41.627 85.202 42.519 1.00 34.48 C
ATOM 7 C4' C A 735 40.745 86.011 41.596 1.00 36.41 C
ATOM 8 O4' C A 735 39.425 85.406 41.508 1.00 36.68 O
ATOM 9 C3' C A 735 40.439 87.431 42.037 1.00 36.12 C
ATOM 10 O3' C A 735 41.509 88.321 41.765 1.00 37.18 O
ATOM 11 C2' C A 735 39.205 87.755 41.209 1.00 35.26 C
ATOM 12 O2' C A 735 39.526 88.072 39.872 1.00 34.88 O
ATOM 13 C1' C A 735 38.458 86.418 41.256 1.00 34.14 C
ATOM 14 N1 C A 735 37.441 86.390 42.320 1.00 31.43 N
ATOM 15 C2 C A 735 36.182 86.978 42.068 1.00 31.61 C
ATOM 16 O2 C A 735 35.952 87.465 40.951 1.00 31.34 O
ATOM 17 N3 C A 735 35.252 86.997 43.047 1.00 29.96 N
ATOM 18 C4 C A 735 35.524 86.453 44.232 1.00 32.17 C
ATOM 19 N4 C A 735 34.577 86.509 45.170 1.00 31.28 N
ATOM 20 C5 C A 735 36.783 85.829 44.512 1.00 32.61 C
ATOM 21 C6 C A 735 37.704 85.823 43.536 1.00 31.67 C
ATOM 22 P C A 736 41.770 89.577 42.737 1.00 39.39 P
ATOM 23 OP1 C A 736 43.088 90.104 42.295 1.00 39.21 O
ATOM 24 OP2 C A 736 41.570 89.172 44.151 1.00 37.98 O
ATOM 25 O5' C A 736 40.615 90.616 42.382 1.00 34.82 O
TER
ATOM 1 O3' C B 735 41.509 88.321 41.765 1.00 37.18 O
ATOM 2 P C B 736 41.770 89.577 42.737 1.00 39.39 P
ATOM 3 OP1 C B 736 43.088 90.104 42.295 1.00 39.21 O
ATOM 4 OP2 C B 736 41.570 89.172 44.151 1.00 37.98 O
ATOM 5 O5' C B 736 40.615 90.616 42.382 1.00 34.82 O
ATOM 6 C5' C B 736 40.514 91.169 41.064 1.00 33.74 C
ATOM 7 C4' C B 736 39.169 91.822 40.867 1.00 34.60 C
ATOM 8 O4' C B 736 38.105 90.838 40.974 1.00 36.02 O
ATOM 9 C3' C B 736 38.771 92.860 41.897 1.00 35.56 C
ATOM 10 O3' C B 736 39.432 94.092 41.674 1.00 36.18 O
ATOM 11 C2' C B 736 37.265 92.945 41.680 1.00 35.60 C
ATOM 12 O2' C B 736 36.906 93.685 40.533 1.00 37.07 O
ATOM 13 C1' C B 736 36.921 91.472 41.447 1.00 34.71 C
ATOM 14 N1 C B 736 36.483 90.826 42.699 1.00 33.28 N
ATOM 15 C2 C B 736 35.168 91.042 43.135 1.00 33.37 C
ATOM 16 O2 C B 736 34.407 91.724 42.433 1.00 34.25 O
ATOM 17 N3 C B 736 34.763 90.509 44.307 1.00 31.12 N
ATOM 18 C4 C B 736 35.612 89.786 45.036 1.00 32.81 C
ATOM 19 N4 C B 736 35.182 89.314 46.207 1.00 32.89 N
ATOM 20 C5 C B 736 36.946 89.524 44.605 1.00 31.93 C
ATOM 21 C6 C B 736 37.336 90.056 43.441 1.00 32.32 C
ATOM 22 P A B 737 39.594 95.137 42.878 1.00 35.18 P
ATOM 23 OP1 A B 737 40.426 96.239 42.332 1.00 38.25 O
ATOM 24 OP2 A B 737 40.040 94.417 44.103 1.00 36.85 O
ATOM 25 O5' A B 737 38.118 95.682 43.114 1.00 32.93 O
TER
ATOM 2 P C A 735 41.557 84.217 44.959 1.00 37.41 P
ATOM 3 OP1 C A 735 43.036 84.186 45.076 1.00 34.06 O
ATOM 4 OP2 C A 735 40.725 84.489 46.166 1.00 36.17 O
ATOM 5 O5' C A 735 41.130 85.283 43.858 1.00 35.48 O
ATOM 6 C5' C A 735 41.627 85.202 42.519 1.00 34.48 C
ATOM 7 C4' C A 735 40.745 86.011 41.596 1.00 36.41 C
ATOM 8 O4' C A 735 39.425 85.406 41.508 1.00 36.68 O
ATOM 9 C3' C A 735 40.439 87.431 42.037 1.00 36.12 C
ATOM 10 O3' C A 735 41.509 88.321 41.765 1.00 37.18 O
ATOM 11 C2' C A 735 39.205 87.755 41.209 1.00 35.26 C
ATOM 12 O2' C A 735 39.526 88.072 39.872 1.00 34.88 O
ATOM 13 C1' C A 735 38.458 86.418 41.256 1.00 34.14 C
ATOM 14 N1 C A 735 37.441 86.390 42.320 1.00 31.43 N
ATOM 15 C2 C A 735 36.182 86.978 42.068 1.00 31.61 C
ATOM 16 O2 C A 735 35.952 87.465 40.951 1.00 31.34 O
ATOM 17 N3 C A 735 35.252 86.997 43.047 1.00 29.96 N
ATOM 18 C4 C A 735 35.524 86.453 44.232 1.00 32.17 C
ATOM 19 N4 C A 735 34.577 86.509 45.170 1.00 31.28 N
ATOM 20 C5 C A 735 36.783 85.829 44.512 1.00 32.61 C
ATOM 21 C6 C A 735 37.704 85.823 43.536 1.00 31.67 C
ATOM 22 P C A 736 41.770 89.577 42.737 1.00 39.39 P
ATOM 23 OP1 C A 736 43.088 90.104 42.295 1.00 39.21 O
ATOM 24 OP2 C A 736 41.570 89.172 44.151 1.00 37.98 O
ATOM 25 O5' C A 736 40.615 90.616 42.382 1.00 34.82 O
TER
ATOM 1 O3' C B 735 41.509 88.321 41.765 1.00 37.18 O
ATOM 2 P C B 736 41.770 89.577 42.737 1.00 39.39 P
ATOM 3 OP1 C B 736 43.088 90.104 42.295 1.00 39.21 O
ATOM 4 OP2 C B 736 41.570 89.172 44.151 1.00 37.98 O
ATOM 5 O5' C B 736 40.615 90.616 42.382 1.00 34.82 O
ATOM 6 C5' C B 736 40.514 91.169 41.064 1.00 33.74 C
ATOM 7 C4' C B 736 39.169 91.822 40.867 1.00 34.60 C
ATOM 8 O4' C B 736 38.105 90.838 40.974 1.00 36.02 O
ATOM 9 C3' C B 736 38.771 92.860 41.897 1.00 35.56 C
ATOM 10 O3' C B 736 39.432 94.092 41.674 1.00 36.18 O
ATOM 11 C2' C B 736 37.265 92.945 41.680 1.00 35.60 C
ATOM 12 O2' C B 736 36.906 93.685 40.533 1.00 37.07 O
ATOM 13 C1' C B 736 36.921 91.472 41.447 1.00 34.71 C
ATOM 14 N1 C B 736 36.483 90.826 42.699 1.00 33.28 N
ATOM 15 C2 C B 736 35.168 91.042 43.135 1.00 33.37 C
ATOM 16 O2 C B 736 34.407 91.724 42.433 1.00 34.25 O
ATOM 17 N3 C B 736 34.763 90.509 44.307 1.00 31.12 N
ATOM 18 C4 C B 736 35.612 89.786 45.036 1.00 32.81 C
ATOM 19 N4 C B 736 35.182 89.314 46.207 1.00 32.89 N
ATOM 20 C5 C B 736 36.946 89.524 44.605 1.00 31.93 C
ATOM 21 C6 C B 736 37.336 90.056 43.441 1.00 32.32 C
ATOM 22 P A B 737 39.594 95.137 42.878 1.00 35.18 P
ATOM 23 OP1 A B 737 40.426 96.239 42.332 1.00 38.25 O
ATOM 24 OP2 A B 737 40.040 94.417 44.103 1.00 36.85 O
ATOM 25 O5' A B 737 38.118 95.682 43.114 1.00 32.93 O
TER
Atoms:
C2: (36.182,86.978,42.068)
OP1: (43.036,84.186,45.076)
OP2: (40.725,84.489,46.166)
C4: (35.524,86.453,44.232)
O5': (41.130,85.283,43.858)
C3': (40.439,87.431,42.037)
C1': (38.458,86.418,41.256)
O4': (39.425,85.406,41.508)
C5': (41.627,85.202,42.519)
P: (41.557,84.217,44.959)
O2: (35.952,87.465,40.951)
C4': (40.745,86.011,41.596)
C2': (39.205,87.755,41.209)
O2': (39.526,88.072,39.872)
N1: (37.441,86.390,42.320)
N3: (35.252,86.997,43.047)
N4: (34.577,86.509,45.170)
C6: (37.704,85.823,43.536)
C5: (36.783,85.829,44.512)
O3': (41.509,88.321,41.765)
OP1: (43.036,84.186,45.076)
OP2: (40.725,84.489,46.166)
C4: (35.524,86.453,44.232)
O5': (41.130,85.283,43.858)
C3': (40.439,87.431,42.037)
C1': (38.458,86.418,41.256)
O4': (39.425,85.406,41.508)
C5': (41.627,85.202,42.519)
P: (41.557,84.217,44.959)
O2: (35.952,87.465,40.951)
C4': (40.745,86.011,41.596)
C2': (39.205,87.755,41.209)
O2': (39.526,88.072,39.872)
N1: (37.441,86.390,42.320)
N3: (35.252,86.997,43.047)
N4: (34.577,86.509,45.170)
C6: (37.704,85.823,43.536)
C5: (36.783,85.829,44.512)
O3': (41.509,88.321,41.765)
C2: (35.168,91.042,43.135)
OP1: (43.088,90.104,42.295)
OP2: (41.570,89.172,44.151)
C4: (35.612,89.786,45.036)
O5': (40.615,90.616,42.382)
C3': (38.771,92.860,41.897)
C1': (36.921,91.472,41.447)
O4': (38.105,90.838,40.974)
C5': (40.514,91.169,41.064)
P: (41.770,89.577,42.737)
O2: (34.407,91.724,42.433)
C4': (39.169,91.822,40.867)
C2': (37.265,92.945,41.680)
O2': (36.906,93.685,40.533)
N1: (36.483,90.826,42.699)
N3: (34.763,90.509,44.307)
N4: (35.182,89.314,46.207)
C6: (37.336,90.056,43.441)
C5: (36.946,89.524,44.605)
O3': (39.432,94.092,41.674)
OP1: (43.088,90.104,42.295)
OP2: (41.570,89.172,44.151)
C4: (35.612,89.786,45.036)
O5': (40.615,90.616,42.382)
C3': (38.771,92.860,41.897)
C1': (36.921,91.472,41.447)
O4': (38.105,90.838,40.974)
C5': (40.514,91.169,41.064)
P: (41.770,89.577,42.737)
O2: (34.407,91.724,42.433)
C4': (39.169,91.822,40.867)
C2': (37.265,92.945,41.680)
O2': (36.906,93.685,40.533)
N1: (36.483,90.826,42.699)
N3: (34.763,90.509,44.307)
N4: (35.182,89.314,46.207)
C6: (37.336,90.056,43.441)
C5: (36.946,89.524,44.605)
O3': (39.432,94.092,41.674)
Image (generated by PyMOL):