Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0882:0754
Extra
PDB:
ATOM 1 O3' A A 881 59.320 117.412 62.171 1.00 27.44 O
ATOM 2 P A A 882 60.634 117.563 63.079 1.00 30.50 P
ATOM 3 OP1 A A 882 60.178 117.701 64.490 1.00 28.94 O
ATOM 4 OP2 A A 882 61.503 118.606 62.479 1.00 31.50 O
ATOM 5 O5' A A 882 61.392 116.176 62.930 1.00 27.32 O
ATOM 6 C5' A A 882 61.924 115.761 61.670 1.00 26.69 C
ATOM 7 C4' A A 882 63.124 114.884 61.891 1.00 25.78 C
ATOM 8 O4' A A 882 64.216 115.672 62.416 1.00 26.01 O
ATOM 9 C3' A A 882 62.911 113.794 62.921 1.00 25.69 C
ATOM 10 O3' A A 882 62.314 112.675 62.293 1.00 29.24 O
ATOM 11 C2' A A 882 64.329 113.499 63.384 1.00 24.25 C
ATOM 12 O2' A A 882 65.003 112.657 62.480 1.00 25.46 O
ATOM 13 C1' A A 882 64.962 114.893 63.339 1.00 24.41 C
ATOM 14 N9 A A 882 64.977 115.597 64.622 1.00 22.16 N
ATOM 15 C8 A A 882 64.220 116.679 64.992 1.00 21.24 C
ATOM 16 N7 A A 882 64.462 117.100 66.203 1.00 21.95 N
ATOM 17 C5 A A 882 65.439 116.234 66.667 1.00 22.02 C
ATOM 18 C6 A A 882 66.113 116.143 67.894 1.00 23.25 C
ATOM 19 N6 A A 882 65.894 116.968 68.915 1.00 24.73 N
ATOM 20 N1 A A 882 67.028 115.164 68.037 1.00 23.58 N
ATOM 21 C2 A A 882 67.242 114.341 67.011 1.00 23.61 C
ATOM 22 N3 A A 882 66.671 114.325 65.809 1.00 22.09 N
ATOM 23 C4 A A 882 65.767 115.307 65.703 1.00 20.90 C
ATOM 24 P C A 883 61.023 111.977 62.944 1.00 29.39 P
ATOM 25 OP1 C A 883 60.531 111.077 61.870 1.00 28.18 O
ATOM 26 OP2 C A 883 60.124 113.012 63.507 1.00 24.50 O
ATOM 27 O5' C A 883 61.620 111.089 64.128 1.00 25.84 O
TER
ATOM 1 O3' A B 753 65.039 121.165 74.905 1.00 27.57 O
ATOM 2 P A B 754 65.489 122.692 75.022 1.00 29.04 P
ATOM 3 OP1 A B 754 64.999 123.237 76.315 1.00 27.33 O
ATOM 4 OP2 A B 754 65.144 123.382 73.749 1.00 28.26 O
ATOM 5 O5' A B 754 67.064 122.563 75.126 1.00 26.06 O
ATOM 6 C5' A B 754 67.812 122.049 74.029 1.00 24.64 C
ATOM 7 C4' A B 754 68.758 120.999 74.508 1.00 23.81 C
ATOM 8 O4' A B 754 68.073 119.725 74.582 1.00 26.29 O
ATOM 9 C3' A B 754 69.868 120.688 73.544 1.00 24.39 C
ATOM 10 O3' A B 754 70.871 121.679 73.566 1.00 24.82 O
ATOM 11 C2' A B 754 70.347 119.337 74.048 1.00 25.63 C
ATOM 12 O2' A B 754 71.165 119.403 75.196 1.00 26.42 O
ATOM 13 C1' A B 754 69.016 118.677 74.403 1.00 26.04 C
ATOM 14 N9 A B 754 68.571 117.814 73.311 1.00 27.52 N
ATOM 15 C8 A B 754 67.956 118.167 72.134 1.00 27.42 C
ATOM 16 N7 A B 754 67.737 117.156 71.331 1.00 28.19 N
ATOM 17 C5 A B 754 68.228 116.062 72.030 1.00 27.98 C
ATOM 18 C6 A B 754 68.301 114.697 71.719 1.00 28.78 C
ATOM 19 N6 A B 754 67.882 114.175 70.562 1.00 28.70 N
ATOM 20 N1 A B 754 68.837 113.874 72.644 1.00 29.03 N
ATOM 21 C2 A B 754 69.282 114.397 73.790 1.00 28.78 C
ATOM 22 N3 A B 754 69.281 115.660 74.192 1.00 29.15 N
ATOM 23 C4 A B 754 68.732 116.452 73.256 1.00 27.63 C
ATOM 24 P U B 755 71.672 121.993 72.221 1.00 29.07 P
ATOM 25 OP1 U B 755 72.910 122.720 72.609 1.00 29.99 O
ATOM 26 OP2 U B 755 70.740 122.589 71.227 1.00 24.71 O
ATOM 27 O5' U B 755 72.066 120.533 71.730 1.00 28.09 O
TER
ATOM 2 P A A 882 60.634 117.563 63.079 1.00 30.50 P
ATOM 3 OP1 A A 882 60.178 117.701 64.490 1.00 28.94 O
ATOM 4 OP2 A A 882 61.503 118.606 62.479 1.00 31.50 O
ATOM 5 O5' A A 882 61.392 116.176 62.930 1.00 27.32 O
ATOM 6 C5' A A 882 61.924 115.761 61.670 1.00 26.69 C
ATOM 7 C4' A A 882 63.124 114.884 61.891 1.00 25.78 C
ATOM 8 O4' A A 882 64.216 115.672 62.416 1.00 26.01 O
ATOM 9 C3' A A 882 62.911 113.794 62.921 1.00 25.69 C
ATOM 10 O3' A A 882 62.314 112.675 62.293 1.00 29.24 O
ATOM 11 C2' A A 882 64.329 113.499 63.384 1.00 24.25 C
ATOM 12 O2' A A 882 65.003 112.657 62.480 1.00 25.46 O
ATOM 13 C1' A A 882 64.962 114.893 63.339 1.00 24.41 C
ATOM 14 N9 A A 882 64.977 115.597 64.622 1.00 22.16 N
ATOM 15 C8 A A 882 64.220 116.679 64.992 1.00 21.24 C
ATOM 16 N7 A A 882 64.462 117.100 66.203 1.00 21.95 N
ATOM 17 C5 A A 882 65.439 116.234 66.667 1.00 22.02 C
ATOM 18 C6 A A 882 66.113 116.143 67.894 1.00 23.25 C
ATOM 19 N6 A A 882 65.894 116.968 68.915 1.00 24.73 N
ATOM 20 N1 A A 882 67.028 115.164 68.037 1.00 23.58 N
ATOM 21 C2 A A 882 67.242 114.341 67.011 1.00 23.61 C
ATOM 22 N3 A A 882 66.671 114.325 65.809 1.00 22.09 N
ATOM 23 C4 A A 882 65.767 115.307 65.703 1.00 20.90 C
ATOM 24 P C A 883 61.023 111.977 62.944 1.00 29.39 P
ATOM 25 OP1 C A 883 60.531 111.077 61.870 1.00 28.18 O
ATOM 26 OP2 C A 883 60.124 113.012 63.507 1.00 24.50 O
ATOM 27 O5' C A 883 61.620 111.089 64.128 1.00 25.84 O
TER
ATOM 1 O3' A B 753 65.039 121.165 74.905 1.00 27.57 O
ATOM 2 P A B 754 65.489 122.692 75.022 1.00 29.04 P
ATOM 3 OP1 A B 754 64.999 123.237 76.315 1.00 27.33 O
ATOM 4 OP2 A B 754 65.144 123.382 73.749 1.00 28.26 O
ATOM 5 O5' A B 754 67.064 122.563 75.126 1.00 26.06 O
ATOM 6 C5' A B 754 67.812 122.049 74.029 1.00 24.64 C
ATOM 7 C4' A B 754 68.758 120.999 74.508 1.00 23.81 C
ATOM 8 O4' A B 754 68.073 119.725 74.582 1.00 26.29 O
ATOM 9 C3' A B 754 69.868 120.688 73.544 1.00 24.39 C
ATOM 10 O3' A B 754 70.871 121.679 73.566 1.00 24.82 O
ATOM 11 C2' A B 754 70.347 119.337 74.048 1.00 25.63 C
ATOM 12 O2' A B 754 71.165 119.403 75.196 1.00 26.42 O
ATOM 13 C1' A B 754 69.016 118.677 74.403 1.00 26.04 C
ATOM 14 N9 A B 754 68.571 117.814 73.311 1.00 27.52 N
ATOM 15 C8 A B 754 67.956 118.167 72.134 1.00 27.42 C
ATOM 16 N7 A B 754 67.737 117.156 71.331 1.00 28.19 N
ATOM 17 C5 A B 754 68.228 116.062 72.030 1.00 27.98 C
ATOM 18 C6 A B 754 68.301 114.697 71.719 1.00 28.78 C
ATOM 19 N6 A B 754 67.882 114.175 70.562 1.00 28.70 N
ATOM 20 N1 A B 754 68.837 113.874 72.644 1.00 29.03 N
ATOM 21 C2 A B 754 69.282 114.397 73.790 1.00 28.78 C
ATOM 22 N3 A B 754 69.281 115.660 74.192 1.00 29.15 N
ATOM 23 C4 A B 754 68.732 116.452 73.256 1.00 27.63 C
ATOM 24 P U B 755 71.672 121.993 72.221 1.00 29.07 P
ATOM 25 OP1 U B 755 72.910 122.720 72.609 1.00 29.99 O
ATOM 26 OP2 U B 755 70.740 122.589 71.227 1.00 24.71 O
ATOM 27 O5' U B 755 72.066 120.533 71.730 1.00 28.09 O
TER
Atoms:
OP1: (60.178,117.701,64.490)
OP2: (61.503,118.606,62.479)
C3': (62.911,113.794,62.921)
C1': (64.962,114.893,63.339)
C5': (61.924,115.761,61.670)
O4': (64.216,115.672,62.416)
C8: (64.220,116.679,64.992)
O2': (65.003,112.657,62.480)
C6: (66.113,116.143,67.894)
C5: (65.439,116.234,66.667)
C4: (65.767,115.307,65.703)
P: (60.634,117.563,63.079)
C4': (63.124,114.884,61.891)
C2': (64.329,113.499,63.384)
C2: (67.242,114.341,67.011)
N1: (67.028,115.164,68.037)
N3: (66.671,114.325,65.809)
N6: (65.894,116.968,68.915)
N7: (64.462,117.100,66.203)
N9: (64.977,115.597,64.622)
O5': (61.392,116.176,62.930)
O3': (62.314,112.675,62.293)
OP2: (61.503,118.606,62.479)
C3': (62.911,113.794,62.921)
C1': (64.962,114.893,63.339)
C5': (61.924,115.761,61.670)
O4': (64.216,115.672,62.416)
C8: (64.220,116.679,64.992)
O2': (65.003,112.657,62.480)
C6: (66.113,116.143,67.894)
C5: (65.439,116.234,66.667)
C4: (65.767,115.307,65.703)
P: (60.634,117.563,63.079)
C4': (63.124,114.884,61.891)
C2': (64.329,113.499,63.384)
C2: (67.242,114.341,67.011)
N1: (67.028,115.164,68.037)
N3: (66.671,114.325,65.809)
N6: (65.894,116.968,68.915)
N7: (64.462,117.100,66.203)
N9: (64.977,115.597,64.622)
O5': (61.392,116.176,62.930)
O3': (62.314,112.675,62.293)
OP1: (64.999,123.237,76.315)
OP2: (65.144,123.382,73.749)
C3': (69.868,120.688,73.544)
C1': (69.016,118.677,74.403)
C5': (67.812,122.049,74.029)
O4': (68.073,119.725,74.582)
C8: (67.956,118.167,72.134)
O2': (71.165,119.403,75.196)
C6: (68.301,114.697,71.719)
C5: (68.228,116.062,72.030)
C4: (68.732,116.452,73.256)
P: (65.489,122.692,75.022)
C4': (68.758,120.999,74.508)
C2': (70.347,119.337,74.048)
C2: (69.282,114.397,73.790)
N1: (68.837,113.874,72.644)
N3: (69.281,115.660,74.192)
N6: (67.882,114.175,70.562)
N7: (67.737,117.156,71.331)
N9: (68.571,117.814,73.311)
O5': (67.064,122.563,75.126)
O3': (70.871,121.679,73.566)
OP2: (65.144,123.382,73.749)
C3': (69.868,120.688,73.544)
C1': (69.016,118.677,74.403)
C5': (67.812,122.049,74.029)
O4': (68.073,119.725,74.582)
C8: (67.956,118.167,72.134)
O2': (71.165,119.403,75.196)
C6: (68.301,114.697,71.719)
C5: (68.228,116.062,72.030)
C4: (68.732,116.452,73.256)
P: (65.489,122.692,75.022)
C4': (68.758,120.999,74.508)
C2': (70.347,119.337,74.048)
C2: (69.282,114.397,73.790)
N1: (68.837,113.874,72.644)
N3: (69.281,115.660,74.192)
N6: (67.882,114.175,70.562)
N7: (67.737,117.156,71.331)
N9: (68.571,117.814,73.311)
O5': (67.064,122.563,75.126)
O3': (70.871,121.679,73.566)
Image (generated by PyMOL):