Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2252:A2223
Extra
PDB:
ATOM 1 O3' G A2251 112.211 -31.077 -49.779 1.00 51.01 O
ATOM 2 P A A2252 112.847 -31.680 -48.439 1.00 56.87 P
ATOM 3 OP1 A A2252 112.644 -30.674 -47.348 1.00 43.06 O
ATOM 4 OP2 A A2252 114.232 -32.130 -48.793 1.00 53.07 O
ATOM 5 O5' A A2252 111.948 -32.943 -48.158 1.00 68.31 O
ATOM 6 C5' A A2252 112.537 -34.134 -47.696 1.00 68.24 C
ATOM 7 C4' A A2252 112.019 -34.507 -46.348 1.00 60.00 C
ATOM 8 O4' A A2252 110.967 -35.461 -46.562 1.00 49.46 O
ATOM 9 C3' A A2252 113.054 -35.164 -45.440 1.00 84.35 C
ATOM 10 O3' A A2252 113.402 -34.349 -44.279 1.00 81.09 O
ATOM 11 C2' A A2252 112.453 -36.515 -45.034 1.00 65.16 C
ATOM 12 O2' A A2252 112.156 -36.627 -43.669 1.00 67.18 O
ATOM 13 C1' A A2252 111.195 -36.666 -45.886 1.00 44.97 C
ATOM 14 N9 A A2252 111.303 -37.746 -46.886 1.00 39.35 N
ATOM 15 C8 A A2252 112.438 -38.194 -47.536 1.00 45.98 C
ATOM 16 N7 A A2252 112.286 -39.217 -48.369 1.00 35.82 N
ATOM 17 C5 A A2252 110.941 -39.500 -48.257 1.00 36.39 C
ATOM 18 C6 A A2252 110.134 -40.483 -48.870 1.00 33.01 C
ATOM 19 N6 A A2252 110.539 -41.403 -49.735 1.00 31.54 N
ATOM 20 N1 A A2252 108.842 -40.491 -48.545 1.00 29.30 N
ATOM 21 C2 A A2252 108.392 -39.583 -47.673 1.00 34.13 C
ATOM 22 N3 A A2252 109.028 -38.613 -47.022 1.00 37.30 N
ATOM 23 C4 A A2252 110.332 -38.616 -47.353 1.00 39.46 C
ATOM 24 P U A2253 112.310 -33.652 -43.330 1.00 57.59 P
ATOM 25 OP1 U A2253 111.023 -33.633 -44.071 1.00 86.62 O
ATOM 26 OP2 U A2253 112.890 -32.376 -42.858 1.00 68.32 O
ATOM 27 O5' U A2253 112.214 -34.651 -42.125 1.00 54.90 O
TER
ATOM 1 O3' A B2222 113.805 -47.258 -52.101 1.00 42.77 O
ATOM 2 P A B2223 113.260 -46.726 -53.521 1.00 36.10 P
ATOM 3 OP1 A B2223 114.266 -47.114 -54.550 1.00 41.59 O
ATOM 4 OP2 A B2223 112.932 -45.293 -53.344 1.00 31.65 O
ATOM 5 O5' A B2223 111.932 -47.575 -53.699 1.00 45.00 O
ATOM 6 C5' A B2223 111.005 -47.290 -54.721 1.00 38.95 C
ATOM 7 C4' A B2223 109.601 -47.683 -54.324 1.00 44.32 C
ATOM 8 O4' A B2223 109.441 -47.574 -52.889 1.00 38.64 O
ATOM 9 C3' A B2223 108.502 -46.797 -54.869 1.00 45.69 C
ATOM 10 O3' A B2223 108.174 -47.075 -56.200 1.00 34.96 O
ATOM 11 C2' A B2223 107.367 -47.019 -53.900 1.00 43.65 C
ATOM 12 O2' A B2223 106.701 -48.233 -54.187 1.00 41.38 O
ATOM 13 C1' A B2223 108.128 -47.172 -52.587 1.00 36.42 C
ATOM 14 N9 A B2223 108.185 -45.913 -51.837 1.00 34.34 N
ATOM 15 C8 A B2223 109.230 -45.134 -51.454 1.00 41.74 C
ATOM 16 N7 A B2223 108.884 -44.072 -50.748 1.00 42.88 N
ATOM 17 C5 A B2223 107.516 -44.175 -50.668 1.00 39.28 C
ATOM 18 C6 A B2223 106.533 -43.394 -50.072 1.00 35.19 C
ATOM 19 N6 A B2223 106.716 -42.270 -49.392 1.00 40.64 N
ATOM 20 N1 A B2223 105.289 -43.821 -50.202 1.00 32.25 N
ATOM 21 C2 A B2223 105.030 -44.928 -50.875 1.00 31.59 C
ATOM 22 N3 A B2223 105.843 -45.758 -51.474 1.00 31.35 N
ATOM 23 C4 A B2223 107.084 -45.308 -51.325 1.00 39.82 C
ATOM 24 P C B2224 108.172 -45.880 -57.251 1.00 41.80 P
ATOM 25 OP1 C B2224 108.471 -46.464 -58.577 1.00 47.27 O
ATOM 26 OP2 C B2224 109.060 -44.817 -56.729 1.00 39.86 O
ATOM 27 O5' C B2224 106.678 -45.379 -57.186 1.00 40.09 O
TER
ATOM 2 P A A2252 112.847 -31.680 -48.439 1.00 56.87 P
ATOM 3 OP1 A A2252 112.644 -30.674 -47.348 1.00 43.06 O
ATOM 4 OP2 A A2252 114.232 -32.130 -48.793 1.00 53.07 O
ATOM 5 O5' A A2252 111.948 -32.943 -48.158 1.00 68.31 O
ATOM 6 C5' A A2252 112.537 -34.134 -47.696 1.00 68.24 C
ATOM 7 C4' A A2252 112.019 -34.507 -46.348 1.00 60.00 C
ATOM 8 O4' A A2252 110.967 -35.461 -46.562 1.00 49.46 O
ATOM 9 C3' A A2252 113.054 -35.164 -45.440 1.00 84.35 C
ATOM 10 O3' A A2252 113.402 -34.349 -44.279 1.00 81.09 O
ATOM 11 C2' A A2252 112.453 -36.515 -45.034 1.00 65.16 C
ATOM 12 O2' A A2252 112.156 -36.627 -43.669 1.00 67.18 O
ATOM 13 C1' A A2252 111.195 -36.666 -45.886 1.00 44.97 C
ATOM 14 N9 A A2252 111.303 -37.746 -46.886 1.00 39.35 N
ATOM 15 C8 A A2252 112.438 -38.194 -47.536 1.00 45.98 C
ATOM 16 N7 A A2252 112.286 -39.217 -48.369 1.00 35.82 N
ATOM 17 C5 A A2252 110.941 -39.500 -48.257 1.00 36.39 C
ATOM 18 C6 A A2252 110.134 -40.483 -48.870 1.00 33.01 C
ATOM 19 N6 A A2252 110.539 -41.403 -49.735 1.00 31.54 N
ATOM 20 N1 A A2252 108.842 -40.491 -48.545 1.00 29.30 N
ATOM 21 C2 A A2252 108.392 -39.583 -47.673 1.00 34.13 C
ATOM 22 N3 A A2252 109.028 -38.613 -47.022 1.00 37.30 N
ATOM 23 C4 A A2252 110.332 -38.616 -47.353 1.00 39.46 C
ATOM 24 P U A2253 112.310 -33.652 -43.330 1.00 57.59 P
ATOM 25 OP1 U A2253 111.023 -33.633 -44.071 1.00 86.62 O
ATOM 26 OP2 U A2253 112.890 -32.376 -42.858 1.00 68.32 O
ATOM 27 O5' U A2253 112.214 -34.651 -42.125 1.00 54.90 O
TER
ATOM 1 O3' A B2222 113.805 -47.258 -52.101 1.00 42.77 O
ATOM 2 P A B2223 113.260 -46.726 -53.521 1.00 36.10 P
ATOM 3 OP1 A B2223 114.266 -47.114 -54.550 1.00 41.59 O
ATOM 4 OP2 A B2223 112.932 -45.293 -53.344 1.00 31.65 O
ATOM 5 O5' A B2223 111.932 -47.575 -53.699 1.00 45.00 O
ATOM 6 C5' A B2223 111.005 -47.290 -54.721 1.00 38.95 C
ATOM 7 C4' A B2223 109.601 -47.683 -54.324 1.00 44.32 C
ATOM 8 O4' A B2223 109.441 -47.574 -52.889 1.00 38.64 O
ATOM 9 C3' A B2223 108.502 -46.797 -54.869 1.00 45.69 C
ATOM 10 O3' A B2223 108.174 -47.075 -56.200 1.00 34.96 O
ATOM 11 C2' A B2223 107.367 -47.019 -53.900 1.00 43.65 C
ATOM 12 O2' A B2223 106.701 -48.233 -54.187 1.00 41.38 O
ATOM 13 C1' A B2223 108.128 -47.172 -52.587 1.00 36.42 C
ATOM 14 N9 A B2223 108.185 -45.913 -51.837 1.00 34.34 N
ATOM 15 C8 A B2223 109.230 -45.134 -51.454 1.00 41.74 C
ATOM 16 N7 A B2223 108.884 -44.072 -50.748 1.00 42.88 N
ATOM 17 C5 A B2223 107.516 -44.175 -50.668 1.00 39.28 C
ATOM 18 C6 A B2223 106.533 -43.394 -50.072 1.00 35.19 C
ATOM 19 N6 A B2223 106.716 -42.270 -49.392 1.00 40.64 N
ATOM 20 N1 A B2223 105.289 -43.821 -50.202 1.00 32.25 N
ATOM 21 C2 A B2223 105.030 -44.928 -50.875 1.00 31.59 C
ATOM 22 N3 A B2223 105.843 -45.758 -51.474 1.00 31.35 N
ATOM 23 C4 A B2223 107.084 -45.308 -51.325 1.00 39.82 C
ATOM 24 P C B2224 108.172 -45.880 -57.251 1.00 41.80 P
ATOM 25 OP1 C B2224 108.471 -46.464 -58.577 1.00 47.27 O
ATOM 26 OP2 C B2224 109.060 -44.817 -56.729 1.00 39.86 O
ATOM 27 O5' C B2224 106.678 -45.379 -57.186 1.00 40.09 O
TER
Atoms:
OP1: (112.644,-30.674,-47.348)
OP2: (114.232,-32.130,-48.793)
C3': (113.054,-35.164,-45.440)
C1': (111.195,-36.666,-45.886)
C5': (112.537,-34.134,-47.696)
O4': (110.967,-35.461,-46.562)
C8: (112.438,-38.194,-47.536)
O2': (112.156,-36.627,-43.669)
C6: (110.134,-40.483,-48.870)
C5: (110.941,-39.500,-48.257)
C4: (110.332,-38.616,-47.353)
P: (112.847,-31.680,-48.439)
C4': (112.019,-34.507,-46.348)
C2': (112.453,-36.515,-45.034)
C2: (108.392,-39.583,-47.673)
N1: (108.842,-40.491,-48.545)
N3: (109.028,-38.613,-47.022)
N6: (110.539,-41.403,-49.735)
N7: (112.286,-39.217,-48.369)
N9: (111.303,-37.746,-46.886)
O5': (111.948,-32.943,-48.158)
O3': (113.402,-34.349,-44.279)
OP2: (114.232,-32.130,-48.793)
C3': (113.054,-35.164,-45.440)
C1': (111.195,-36.666,-45.886)
C5': (112.537,-34.134,-47.696)
O4': (110.967,-35.461,-46.562)
C8: (112.438,-38.194,-47.536)
O2': (112.156,-36.627,-43.669)
C6: (110.134,-40.483,-48.870)
C5: (110.941,-39.500,-48.257)
C4: (110.332,-38.616,-47.353)
P: (112.847,-31.680,-48.439)
C4': (112.019,-34.507,-46.348)
C2': (112.453,-36.515,-45.034)
C2: (108.392,-39.583,-47.673)
N1: (108.842,-40.491,-48.545)
N3: (109.028,-38.613,-47.022)
N6: (110.539,-41.403,-49.735)
N7: (112.286,-39.217,-48.369)
N9: (111.303,-37.746,-46.886)
O5': (111.948,-32.943,-48.158)
O3': (113.402,-34.349,-44.279)
OP1: (114.266,-47.114,-54.550)
OP2: (112.932,-45.293,-53.344)
C3': (108.502,-46.797,-54.869)
C1': (108.128,-47.172,-52.587)
C5': (111.005,-47.290,-54.721)
O4': (109.441,-47.574,-52.889)
C8: (109.230,-45.134,-51.454)
O2': (106.701,-48.233,-54.187)
C6: (106.533,-43.394,-50.072)
C5: (107.516,-44.175,-50.668)
C4: (107.084,-45.308,-51.325)
P: (113.260,-46.726,-53.521)
C4': (109.601,-47.683,-54.324)
C2': (107.367,-47.019,-53.900)
C2: (105.030,-44.928,-50.875)
N1: (105.289,-43.821,-50.202)
N3: (105.843,-45.758,-51.474)
N6: (106.716,-42.270,-49.392)
N7: (108.884,-44.072,-50.748)
N9: (108.185,-45.913,-51.837)
O5': (111.932,-47.575,-53.699)
O3': (108.174,-47.075,-56.200)
OP2: (112.932,-45.293,-53.344)
C3': (108.502,-46.797,-54.869)
C1': (108.128,-47.172,-52.587)
C5': (111.005,-47.290,-54.721)
O4': (109.441,-47.574,-52.889)
C8: (109.230,-45.134,-51.454)
O2': (106.701,-48.233,-54.187)
C6: (106.533,-43.394,-50.072)
C5: (107.516,-44.175,-50.668)
C4: (107.084,-45.308,-51.325)
P: (113.260,-46.726,-53.521)
C4': (109.601,-47.683,-54.324)
C2': (107.367,-47.019,-53.900)
C2: (105.030,-44.928,-50.875)
N1: (105.289,-43.821,-50.202)
N3: (105.843,-45.758,-51.474)
N6: (106.716,-42.270,-49.392)
N7: (108.884,-44.072,-50.748)
N9: (108.185,-45.913,-51.837)
O5': (111.932,-47.575,-53.699)
O3': (108.174,-47.075,-56.200)
Image (generated by PyMOL):