ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:0545:0546

Extra

PDB:
ATOM 1 O3' C A 544 -2.266 120.006 93.953 1.00 58.90 O
ATOM 2 P C A 545 -2.964 118.945 94.939 1.00 61.20 P
ATOM 3 OP1 C A 545 -1.879 118.339 95.757 1.00 61.08 O
ATOM 4 OP2 C A 545 -3.854 118.063 94.139 1.00 59.64 O
ATOM 5 O5' C A 545 -3.837 119.858 95.907 1.00 59.92 O
ATOM 6 C5' C A 545 -3.194 120.730 96.849 1.00 61.59 C
ATOM 7 C4' C A 545 -4.220 121.453 97.686 1.00 63.86 C
ATOM 8 O4' C A 545 -5.031 122.302 96.836 1.00 63.32 O
ATOM 9 C3' C A 545 -5.230 120.579 98.407 1.00 64.87 C
ATOM 10 O3' C A 545 -4.691 120.070 99.619 1.00 67.87 O
ATOM 11 C2' C A 545 -6.368 121.557 98.648 1.00 64.65 C
ATOM 12 O2' C A 545 -6.097 122.439 99.716 1.00 65.55 O
ATOM 13 C1' C A 545 -6.351 122.357 97.345 1.00 63.67 C
ATOM 14 N1 C A 545 -7.249 121.803 96.328 1.00 62.54 N
ATOM 15 C2 C A 545 -8.586 122.214 96.307 1.00 62.18 C
ATOM 16 O2 C A 545 -8.977 123.037 97.150 1.00 62.03 O
ATOM 17 N3 C A 545 -9.417 121.706 95.367 1.00 62.06 N
ATOM 18 C4 C A 545 -8.955 120.827 94.472 1.00 62.05 C
ATOM 19 N4 C A 545 -9.807 120.353 93.559 1.00 61.42 N
ATOM 20 C5 C A 545 -7.597 120.393 94.475 1.00 62.22 C
ATOM 21 C6 C A 545 -6.789 120.899 95.412 1.00 62.04 C
ATOM 22 P C A 546 -5.281 118.713 100.253 1.00 71.56 P
ATOM 23 OP1 C A 546 -4.453 118.399 101.448 1.00 71.50 O
ATOM 24 OP2 C A 546 -5.450 117.687 99.183 1.00 70.11 O
ATOM 25 O5' C A 546 -6.718 119.140 100.783 1.00 71.74 O
TER

ATOM 1 O3' C B 545 -4.691 120.070 99.619 1.00 67.87 O
ATOM 2 P C B 546 -5.281 118.713 100.253 1.00 71.56 P
ATOM 3 OP1 C B 546 -4.453 118.399 101.448 1.00 71.50 O
ATOM 4 OP2 C B 546 -5.450 117.687 99.183 1.00 70.11 O
ATOM 5 O5' C B 546 -6.718 119.140 100.783 1.00 71.74 O
ATOM 6 C5' C B 546 -6.842 120.022 101.900 1.00 72.77 C
ATOM 7 C4' C B 546 -8.294 120.261 102.215 1.00 74.23 C
ATOM 8 O4' C B 546 -8.926 120.960 101.110 1.00 73.92 O
ATOM 9 C3' C B 546 -9.149 119.020 102.387 1.00 75.05 C
ATOM 10 O3' C B 546 -8.973 118.426 103.669 1.00 75.61 O
ATOM 11 C2' C B 546 -10.546 119.584 102.162 1.00 74.70 C
ATOM 12 O2' C B 546 -11.038 120.312 103.272 1.00 73.44 O
ATOM 13 C1' C B 546 -10.283 120.559 101.013 1.00 74.27 C
ATOM 14 N1 C B 546 -10.478 119.929 99.704 1.00 74.36 N
ATOM 15 C2 C B 546 -11.725 120.042 99.080 1.00 74.51 C
ATOM 16 O2 C B 546 -12.626 120.678 99.651 1.00 75.13 O
ATOM 17 N3 C B 546 -11.916 119.458 97.874 1.00 74.56 N
ATOM 18 C4 C B 546 -10.918 118.784 97.295 1.00 74.66 C
ATOM 19 N4 C B 546 -11.150 118.221 96.109 1.00 73.55 N
ATOM 20 C5 C B 546 -9.637 118.657 97.909 1.00 75.33 C
ATOM 21 C6 C B 546 -9.463 119.239 99.102 1.00 75.00 C
ATOM 22 P U B 547 -9.232 116.851 103.857 1.00 75.77 P
ATOM 23 OP1 U B 547 -8.430 116.388 105.012 1.00 75.50 O
ATOM 24 OP2 U B 547 -9.067 116.192 102.542 1.00 75.36 O
ATOM 25 O5' U B 547 -10.775 116.770 104.242 1.00 75.51 O
TER

Atoms:
C2: (-8.586,122.214,96.307)
OP1: (-1.879,118.339,95.757)
OP2: (-3.854,118.063,94.139)
C4: (-8.955,120.827,94.472)
O5': (-3.837,119.858,95.907)
C3': (-5.230,120.579,98.407)
C1': (-6.351,122.357,97.345)
O4': (-5.031,122.302,96.836)
C5': (-3.194,120.730,96.849)
P: (-2.964,118.945,94.939)
O2: (-8.977,123.037,97.150)
C4': (-4.220,121.453,97.686)
C2': (-6.368,121.557,98.648)
O2': (-6.097,122.439,99.716)
N1: (-7.249,121.803,96.328)
N3: (-9.417,121.706,95.367)
N4: (-9.807,120.353,93.559)
C6: (-6.789,120.899,95.412)
C5: (-7.597,120.393,94.475)
O3': (-4.691,120.070,99.619)
C2: (-11.725,120.042,99.080)
OP1: (-4.453,118.399,101.448)
OP2: (-5.450,117.687,99.183)
C4: (-10.918,118.784,97.295)
O5': (-6.718,119.140,100.783)
C3': (-9.149,119.020,102.387)
C1': (-10.283,120.559,101.013)
O4': (-8.926,120.960,101.110)
C5': (-6.842,120.022,101.900)
P: (-5.281,118.713,100.253)
O2: (-12.626,120.678,99.651)
C4': (-8.294,120.261,102.215)
C2': (-10.546,119.584,102.162)
O2': (-11.038,120.312,103.272)
N1: (-10.478,119.929,99.704)
N3: (-11.916,119.458,97.874)
N4: (-11.150,118.221,96.109)
C6: (-9.463,119.239,99.102)
C5: (-9.637,118.657,97.909)
O3': (-8.973,118.426,103.669)
Image (generated by PyMOL):
PyMOL image
show in jmol