Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A97:A98
Extra
PDB:
ATOM 1 O3' U A 96 -8.929 36.732 6.462 1.00 41.37 O
ATOM 2 P C A 97 -7.499 36.000 6.406 1.00 42.61 P
ATOM 3 OP1 C A 97 -7.670 34.576 6.766 1.00 42.55 O
ATOM 4 OP2 C A 97 -6.539 36.814 7.188 1.00 43.19 O
ATOM 5 O5' C A 97 -7.083 36.122 4.858 1.00 43.22 O
ATOM 6 C5' C A 97 -7.754 35.427 3.789 1.00 43.32 C
ATOM 7 C4' C A 97 -6.987 35.554 2.477 1.00 43.55 C
ATOM 8 O4' C A 97 -7.016 36.930 2.000 1.00 43.49 O
ATOM 9 C3' C A 97 -5.501 35.211 2.553 1.00 43.59 C
ATOM 10 O3' C A 97 -5.249 33.814 2.454 1.00 43.63 O
ATOM 11 C2' C A 97 -4.922 35.996 1.376 1.00 43.61 C
ATOM 12 O2' C A 97 -5.020 35.322 0.136 1.00 43.99 O
ATOM 13 C1' C A 97 -5.780 37.259 1.378 1.00 43.45 C
ATOM 14 N1 C A 97 -5.078 38.384 2.091 1.00 43.34 N
ATOM 15 C2 C A 97 -4.102 39.140 1.416 1.00 43.22 C
ATOM 16 O2 C A 97 -3.833 38.893 0.234 1.00 43.27 O
ATOM 17 N3 C A 97 -3.469 40.142 2.079 1.00 43.26 N
ATOM 18 C4 C A 97 -3.769 40.400 3.357 1.00 43.20 C
ATOM 19 N4 C A 97 -3.123 41.397 3.966 1.00 42.86 N
ATOM 20 C5 C A 97 -4.748 39.641 4.068 1.00 43.44 C
ATOM 21 C6 C A 97 -5.367 38.657 3.403 1.00 43.39 C
ATOM 22 P C A 98 -3.927 33.210 3.135 1.00 44.70 P
ATOM 23 OP1 C A 98 -4.043 31.735 3.076 1.00 45.36 O
ATOM 24 OP2 C A 98 -3.724 33.860 4.449 1.00 44.15 O
ATOM 25 O5' C A 98 -2.729 33.693 2.178 1.00 44.56 O
TER
ATOM 1 O3' C B 97 -5.249 33.814 2.454 1.00 43.63 O
ATOM 2 P C B 98 -3.927 33.210 3.135 1.00 44.70 P
ATOM 3 OP1 C B 98 -4.043 31.735 3.076 1.00 45.36 O
ATOM 4 OP2 C B 98 -3.724 33.860 4.449 1.00 44.15 O
ATOM 5 O5' C B 98 -2.729 33.693 2.178 1.00 44.56 O
ATOM 6 C5' C B 98 -2.526 33.139 0.872 1.00 44.06 C
ATOM 7 C4' C B 98 -1.529 33.933 0.038 1.00 43.59 C
ATOM 8 O4' C B 98 -1.901 35.340 -0.016 1.00 43.48 O
ATOM 9 C3' C B 98 -0.095 33.944 0.555 1.00 43.41 C
ATOM 10 O3' C B 98 0.620 32.764 0.192 1.00 43.23 O
ATOM 11 C2' C B 98 0.463 35.187 -0.139 1.00 43.50 C
ATOM 12 O2' C B 98 0.939 34.957 -1.453 1.00 43.56 O
ATOM 13 C1' C B 98 -0.735 36.141 -0.147 1.00 43.68 C
ATOM 14 N1 C B 98 -0.593 37.129 0.983 1.00 44.00 N
ATOM 15 C2 C B 98 0.275 38.229 0.846 1.00 44.09 C
ATOM 16 O2 C B 98 0.896 38.405 -0.210 1.00 44.17 O
ATOM 17 N3 C B 98 0.409 39.094 1.885 1.00 44.20 N
ATOM 18 C4 C B 98 -0.270 38.898 3.019 1.00 44.04 C
ATOM 19 N4 C B 98 -0.099 39.780 4.005 1.00 44.12 N
ATOM 20 C5 C B 98 -1.148 37.788 3.192 1.00 43.95 C
ATOM 21 C6 C B 98 -1.272 36.942 2.161 1.00 44.20 C
ATOM 22 P C B 99 1.774 32.159 1.135 1.00 43.96 P
ATOM 23 OP1 C B 99 2.277 30.928 0.479 1.00 44.41 O
ATOM 24 OP2 C B 99 1.225 32.075 2.511 1.00 44.02 O
ATOM 25 O5' C B 99 2.954 33.252 1.146 1.00 43.09 O
TER
ATOM 2 P C A 97 -7.499 36.000 6.406 1.00 42.61 P
ATOM 3 OP1 C A 97 -7.670 34.576 6.766 1.00 42.55 O
ATOM 4 OP2 C A 97 -6.539 36.814 7.188 1.00 43.19 O
ATOM 5 O5' C A 97 -7.083 36.122 4.858 1.00 43.22 O
ATOM 6 C5' C A 97 -7.754 35.427 3.789 1.00 43.32 C
ATOM 7 C4' C A 97 -6.987 35.554 2.477 1.00 43.55 C
ATOM 8 O4' C A 97 -7.016 36.930 2.000 1.00 43.49 O
ATOM 9 C3' C A 97 -5.501 35.211 2.553 1.00 43.59 C
ATOM 10 O3' C A 97 -5.249 33.814 2.454 1.00 43.63 O
ATOM 11 C2' C A 97 -4.922 35.996 1.376 1.00 43.61 C
ATOM 12 O2' C A 97 -5.020 35.322 0.136 1.00 43.99 O
ATOM 13 C1' C A 97 -5.780 37.259 1.378 1.00 43.45 C
ATOM 14 N1 C A 97 -5.078 38.384 2.091 1.00 43.34 N
ATOM 15 C2 C A 97 -4.102 39.140 1.416 1.00 43.22 C
ATOM 16 O2 C A 97 -3.833 38.893 0.234 1.00 43.27 O
ATOM 17 N3 C A 97 -3.469 40.142 2.079 1.00 43.26 N
ATOM 18 C4 C A 97 -3.769 40.400 3.357 1.00 43.20 C
ATOM 19 N4 C A 97 -3.123 41.397 3.966 1.00 42.86 N
ATOM 20 C5 C A 97 -4.748 39.641 4.068 1.00 43.44 C
ATOM 21 C6 C A 97 -5.367 38.657 3.403 1.00 43.39 C
ATOM 22 P C A 98 -3.927 33.210 3.135 1.00 44.70 P
ATOM 23 OP1 C A 98 -4.043 31.735 3.076 1.00 45.36 O
ATOM 24 OP2 C A 98 -3.724 33.860 4.449 1.00 44.15 O
ATOM 25 O5' C A 98 -2.729 33.693 2.178 1.00 44.56 O
TER
ATOM 1 O3' C B 97 -5.249 33.814 2.454 1.00 43.63 O
ATOM 2 P C B 98 -3.927 33.210 3.135 1.00 44.70 P
ATOM 3 OP1 C B 98 -4.043 31.735 3.076 1.00 45.36 O
ATOM 4 OP2 C B 98 -3.724 33.860 4.449 1.00 44.15 O
ATOM 5 O5' C B 98 -2.729 33.693 2.178 1.00 44.56 O
ATOM 6 C5' C B 98 -2.526 33.139 0.872 1.00 44.06 C
ATOM 7 C4' C B 98 -1.529 33.933 0.038 1.00 43.59 C
ATOM 8 O4' C B 98 -1.901 35.340 -0.016 1.00 43.48 O
ATOM 9 C3' C B 98 -0.095 33.944 0.555 1.00 43.41 C
ATOM 10 O3' C B 98 0.620 32.764 0.192 1.00 43.23 O
ATOM 11 C2' C B 98 0.463 35.187 -0.139 1.00 43.50 C
ATOM 12 O2' C B 98 0.939 34.957 -1.453 1.00 43.56 O
ATOM 13 C1' C B 98 -0.735 36.141 -0.147 1.00 43.68 C
ATOM 14 N1 C B 98 -0.593 37.129 0.983 1.00 44.00 N
ATOM 15 C2 C B 98 0.275 38.229 0.846 1.00 44.09 C
ATOM 16 O2 C B 98 0.896 38.405 -0.210 1.00 44.17 O
ATOM 17 N3 C B 98 0.409 39.094 1.885 1.00 44.20 N
ATOM 18 C4 C B 98 -0.270 38.898 3.019 1.00 44.04 C
ATOM 19 N4 C B 98 -0.099 39.780 4.005 1.00 44.12 N
ATOM 20 C5 C B 98 -1.148 37.788 3.192 1.00 43.95 C
ATOM 21 C6 C B 98 -1.272 36.942 2.161 1.00 44.20 C
ATOM 22 P C B 99 1.774 32.159 1.135 1.00 43.96 P
ATOM 23 OP1 C B 99 2.277 30.928 0.479 1.00 44.41 O
ATOM 24 OP2 C B 99 1.225 32.075 2.511 1.00 44.02 O
ATOM 25 O5' C B 99 2.954 33.252 1.146 1.00 43.09 O
TER
Atoms:
C2: (-4.102,39.140,1.416)
OP1: (-7.670,34.576,6.766)
OP2: (-6.539,36.814,7.188)
C4: (-3.769,40.400,3.357)
O5': (-7.083,36.122,4.858)
C3': (-5.501,35.211,2.553)
C1': (-5.780,37.259,1.378)
O4': (-7.016,36.930,2.000)
C5': (-7.754,35.427,3.789)
P: (-7.499,36.000,6.406)
O2: (-3.833,38.893,0.234)
C4': (-6.987,35.554,2.477)
C2': (-4.922,35.996,1.376)
O2': (-5.020,35.322,0.136)
N1: (-5.078,38.384,2.091)
N3: (-3.469,40.142,2.079)
N4: (-3.123,41.397,3.966)
C6: (-5.367,38.657,3.403)
C5: (-4.748,39.641,4.068)
O3': (-5.249,33.814,2.454)
OP1: (-7.670,34.576,6.766)
OP2: (-6.539,36.814,7.188)
C4: (-3.769,40.400,3.357)
O5': (-7.083,36.122,4.858)
C3': (-5.501,35.211,2.553)
C1': (-5.780,37.259,1.378)
O4': (-7.016,36.930,2.000)
C5': (-7.754,35.427,3.789)
P: (-7.499,36.000,6.406)
O2: (-3.833,38.893,0.234)
C4': (-6.987,35.554,2.477)
C2': (-4.922,35.996,1.376)
O2': (-5.020,35.322,0.136)
N1: (-5.078,38.384,2.091)
N3: (-3.469,40.142,2.079)
N4: (-3.123,41.397,3.966)
C6: (-5.367,38.657,3.403)
C5: (-4.748,39.641,4.068)
O3': (-5.249,33.814,2.454)
C2: (0.275,38.229,0.846)
OP1: (-4.043,31.735,3.076)
OP2: (-3.724,33.860,4.449)
C4: (-0.270,38.898,3.019)
O5': (-2.729,33.693,2.178)
C3': (-0.095,33.944,0.555)
C1': (-0.735,36.141,-0.147)
O4': (-1.901,35.340,-0.016)
C5': (-2.526,33.139,0.872)
P: (-3.927,33.210,3.135)
O2: (0.896,38.405,-0.210)
C4': (-1.529,33.933,0.038)
C2': (0.463,35.187,-0.139)
O2': (0.939,34.957,-1.453)
N1: (-0.593,37.129,0.983)
N3: (0.409,39.094,1.885)
N4: (-0.099,39.780,4.005)
C6: (-1.272,36.942,2.161)
C5: (-1.148,37.788,3.192)
O3': (0.620,32.764,0.192)
OP1: (-4.043,31.735,3.076)
OP2: (-3.724,33.860,4.449)
C4: (-0.270,38.898,3.019)
O5': (-2.729,33.693,2.178)
C3': (-0.095,33.944,0.555)
C1': (-0.735,36.141,-0.147)
O4': (-1.901,35.340,-0.016)
C5': (-2.526,33.139,0.872)
P: (-3.927,33.210,3.135)
O2: (0.896,38.405,-0.210)
C4': (-1.529,33.933,0.038)
C2': (0.463,35.187,-0.139)
O2': (0.939,34.957,-1.453)
N1: (-0.593,37.129,0.983)
N3: (0.409,39.094,1.885)
N4: (-0.099,39.780,4.005)
C6: (-1.272,36.942,2.161)
C5: (-1.148,37.788,3.192)
O3': (0.620,32.764,0.192)
Image (generated by PyMOL):