Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MSY:A4:A5
Extra
PDB:
ATOM 1 O3' U A 3 15.087 29.328 17.415 1.00 10.84 O
ATOM 2 P C A 4 14.436 28.682 16.096 1.00 10.08 P
ATOM 3 OP1 C A 4 13.624 29.769 15.479 1.00 10.38 O
ATOM 4 OP2 C A 4 13.833 27.382 16.408 1.00 10.93 O
ATOM 5 O5' C A 4 15.679 28.387 15.119 1.00 9.28 O
ATOM 6 C5' C A 4 16.472 29.513 14.660 1.00 8.73 C
ATOM 7 C4' C A 4 17.688 29.051 13.876 1.00 8.41 C
ATOM 8 O4' C A 4 18.551 28.341 14.814 1.00 8.09 O
ATOM 9 C3' C A 4 17.406 27.957 12.815 1.00 8.49 C
ATOM 10 O3' C A 4 16.961 28.537 11.601 1.00 8.87 O
ATOM 11 C2' C A 4 18.828 27.389 12.641 1.00 8.16 C
ATOM 12 O2' C A 4 19.684 28.333 12.023 1.00 8.41 O
ATOM 13 C1' C A 4 19.201 27.282 14.116 1.00 8.08 C
ATOM 14 N1 C A 4 18.869 26.024 14.767 1.00 8.03 N
ATOM 15 C2 C A 4 19.731 24.936 14.542 1.00 7.99 C
ATOM 16 O2 C A 4 20.676 25.066 13.742 1.00 8.31 O
ATOM 17 N3 C A 4 19.504 23.738 15.155 1.00 8.08 N
ATOM 18 C4 C A 4 18.400 23.595 15.894 1.00 7.87 C
ATOM 19 N4 C A 4 18.287 22.441 16.569 1.00 7.90 N
ATOM 20 C5 C A 4 17.472 24.661 16.095 1.00 7.95 C
ATOM 21 C6 C A 4 17.720 25.833 15.479 1.00 7.94 C
ATOM 22 P C A 5 16.046 27.627 10.627 1.00 9.23 P
ATOM 23 OP1 C A 5 15.614 28.566 9.561 1.00 10.83 O
ATOM 24 OP2 C A 5 15.079 26.833 11.417 1.00 10.34 O
ATOM 25 O5' C A 5 17.084 26.557 10.056 1.00 9.07 O
TER
ATOM 1 O3' C B 4 16.961 28.537 11.601 1.00 8.87 O
ATOM 2 P C B 5 16.046 27.627 10.627 1.00 9.23 P
ATOM 3 OP1 C B 5 15.614 28.566 9.561 1.00 10.83 O
ATOM 4 OP2 C B 5 15.079 26.833 11.417 1.00 10.34 O
ATOM 5 O5' C B 5 17.084 26.557 10.056 1.00 9.07 O
ATOM 6 C5' C B 5 18.147 26.984 9.167 1.00 8.65 C
ATOM 7 C4' C B 5 19.051 25.804 8.872 1.00 8.36 C
ATOM 8 O4' C B 5 19.563 25.227 10.119 1.00 8.23 O
ATOM 9 C3' C B 5 18.302 24.631 8.245 1.00 8.13 C
ATOM 10 O3' C B 5 18.058 24.863 6.871 1.00 8.05 O
ATOM 11 C2' C B 5 19.317 23.487 8.481 1.00 8.19 C
ATOM 12 O2' C B 5 20.476 23.701 7.651 1.00 8.30 O
ATOM 13 C1' C B 5 19.689 23.819 9.916 1.00 8.18 C
ATOM 14 N1 C B 5 18.966 23.100 10.963 1.00 8.08 N
ATOM 15 C2 C B 5 19.337 21.770 11.201 1.00 8.29 C
ATOM 16 O2 C B 5 20.221 21.305 10.454 1.00 8.62 O
ATOM 17 N3 C B 5 18.722 21.011 12.140 1.00 8.43 N
ATOM 18 C4 C B 5 17.783 21.587 12.884 1.00 8.35 C
ATOM 19 N4 C B 5 17.255 20.839 13.871 1.00 8.63 N
ATOM 20 C5 C B 5 17.307 22.918 12.618 1.00 8.15 C
ATOM 21 C6 C B 5 17.916 23.626 11.655 1.00 8.03 C
ATOM 22 P U B 6 16.811 24.149 6.154 1.00 8.24 P
ATOM 23 OP1 U B 6 16.820 24.629 4.764 1.00 9.46 O
ATOM 24 OP2 U B 6 15.591 24.322 6.952 1.00 8.49 O
ATOM 25 O5' U B 6 17.176 22.602 6.161 1.00 8.35 O
TER
ATOM 2 P C A 4 14.436 28.682 16.096 1.00 10.08 P
ATOM 3 OP1 C A 4 13.624 29.769 15.479 1.00 10.38 O
ATOM 4 OP2 C A 4 13.833 27.382 16.408 1.00 10.93 O
ATOM 5 O5' C A 4 15.679 28.387 15.119 1.00 9.28 O
ATOM 6 C5' C A 4 16.472 29.513 14.660 1.00 8.73 C
ATOM 7 C4' C A 4 17.688 29.051 13.876 1.00 8.41 C
ATOM 8 O4' C A 4 18.551 28.341 14.814 1.00 8.09 O
ATOM 9 C3' C A 4 17.406 27.957 12.815 1.00 8.49 C
ATOM 10 O3' C A 4 16.961 28.537 11.601 1.00 8.87 O
ATOM 11 C2' C A 4 18.828 27.389 12.641 1.00 8.16 C
ATOM 12 O2' C A 4 19.684 28.333 12.023 1.00 8.41 O
ATOM 13 C1' C A 4 19.201 27.282 14.116 1.00 8.08 C
ATOM 14 N1 C A 4 18.869 26.024 14.767 1.00 8.03 N
ATOM 15 C2 C A 4 19.731 24.936 14.542 1.00 7.99 C
ATOM 16 O2 C A 4 20.676 25.066 13.742 1.00 8.31 O
ATOM 17 N3 C A 4 19.504 23.738 15.155 1.00 8.08 N
ATOM 18 C4 C A 4 18.400 23.595 15.894 1.00 7.87 C
ATOM 19 N4 C A 4 18.287 22.441 16.569 1.00 7.90 N
ATOM 20 C5 C A 4 17.472 24.661 16.095 1.00 7.95 C
ATOM 21 C6 C A 4 17.720 25.833 15.479 1.00 7.94 C
ATOM 22 P C A 5 16.046 27.627 10.627 1.00 9.23 P
ATOM 23 OP1 C A 5 15.614 28.566 9.561 1.00 10.83 O
ATOM 24 OP2 C A 5 15.079 26.833 11.417 1.00 10.34 O
ATOM 25 O5' C A 5 17.084 26.557 10.056 1.00 9.07 O
TER
ATOM 1 O3' C B 4 16.961 28.537 11.601 1.00 8.87 O
ATOM 2 P C B 5 16.046 27.627 10.627 1.00 9.23 P
ATOM 3 OP1 C B 5 15.614 28.566 9.561 1.00 10.83 O
ATOM 4 OP2 C B 5 15.079 26.833 11.417 1.00 10.34 O
ATOM 5 O5' C B 5 17.084 26.557 10.056 1.00 9.07 O
ATOM 6 C5' C B 5 18.147 26.984 9.167 1.00 8.65 C
ATOM 7 C4' C B 5 19.051 25.804 8.872 1.00 8.36 C
ATOM 8 O4' C B 5 19.563 25.227 10.119 1.00 8.23 O
ATOM 9 C3' C B 5 18.302 24.631 8.245 1.00 8.13 C
ATOM 10 O3' C B 5 18.058 24.863 6.871 1.00 8.05 O
ATOM 11 C2' C B 5 19.317 23.487 8.481 1.00 8.19 C
ATOM 12 O2' C B 5 20.476 23.701 7.651 1.00 8.30 O
ATOM 13 C1' C B 5 19.689 23.819 9.916 1.00 8.18 C
ATOM 14 N1 C B 5 18.966 23.100 10.963 1.00 8.08 N
ATOM 15 C2 C B 5 19.337 21.770 11.201 1.00 8.29 C
ATOM 16 O2 C B 5 20.221 21.305 10.454 1.00 8.62 O
ATOM 17 N3 C B 5 18.722 21.011 12.140 1.00 8.43 N
ATOM 18 C4 C B 5 17.783 21.587 12.884 1.00 8.35 C
ATOM 19 N4 C B 5 17.255 20.839 13.871 1.00 8.63 N
ATOM 20 C5 C B 5 17.307 22.918 12.618 1.00 8.15 C
ATOM 21 C6 C B 5 17.916 23.626 11.655 1.00 8.03 C
ATOM 22 P U B 6 16.811 24.149 6.154 1.00 8.24 P
ATOM 23 OP1 U B 6 16.820 24.629 4.764 1.00 9.46 O
ATOM 24 OP2 U B 6 15.591 24.322 6.952 1.00 8.49 O
ATOM 25 O5' U B 6 17.176 22.602 6.161 1.00 8.35 O
TER
Atoms:
C2: (19.731,24.936,14.542)
OP1: (13.624,29.769,15.479)
OP2: (13.833,27.382,16.408)
C4: (18.400,23.595,15.894)
O5': (15.679,28.387,15.119)
C3': (17.406,27.957,12.815)
C1': (19.201,27.282,14.116)
O4': (18.551,28.341,14.814)
C5': (16.472,29.513,14.660)
P: (14.436,28.682,16.096)
O2: (20.676,25.066,13.742)
C4': (17.688,29.051,13.876)
C2': (18.828,27.389,12.641)
O2': (19.684,28.333,12.023)
N1: (18.869,26.024,14.767)
N3: (19.504,23.738,15.155)
N4: (18.287,22.441,16.569)
C6: (17.720,25.833,15.479)
C5: (17.472,24.661,16.095)
O3': (16.961,28.537,11.601)
OP1: (13.624,29.769,15.479)
OP2: (13.833,27.382,16.408)
C4: (18.400,23.595,15.894)
O5': (15.679,28.387,15.119)
C3': (17.406,27.957,12.815)
C1': (19.201,27.282,14.116)
O4': (18.551,28.341,14.814)
C5': (16.472,29.513,14.660)
P: (14.436,28.682,16.096)
O2: (20.676,25.066,13.742)
C4': (17.688,29.051,13.876)
C2': (18.828,27.389,12.641)
O2': (19.684,28.333,12.023)
N1: (18.869,26.024,14.767)
N3: (19.504,23.738,15.155)
N4: (18.287,22.441,16.569)
C6: (17.720,25.833,15.479)
C5: (17.472,24.661,16.095)
O3': (16.961,28.537,11.601)
C2: (19.337,21.770,11.201)
OP1: (15.614,28.566,9.561)
OP2: (15.079,26.833,11.417)
C4: (17.783,21.587,12.884)
O5': (17.084,26.557,10.056)
C3': (18.302,24.631,8.245)
C1': (19.689,23.819,9.916)
O4': (19.563,25.227,10.119)
C5': (18.147,26.984,9.167)
P: (16.046,27.627,10.627)
O2: (20.221,21.305,10.454)
C4': (19.051,25.804,8.872)
C2': (19.317,23.487,8.481)
O2': (20.476,23.701,7.651)
N1: (18.966,23.100,10.963)
N3: (18.722,21.011,12.140)
N4: (17.255,20.839,13.871)
C6: (17.916,23.626,11.655)
C5: (17.307,22.918,12.618)
O3': (18.058,24.863,6.871)
OP1: (15.614,28.566,9.561)
OP2: (15.079,26.833,11.417)
C4: (17.783,21.587,12.884)
O5': (17.084,26.557,10.056)
C3': (18.302,24.631,8.245)
C1': (19.689,23.819,9.916)
O4': (19.563,25.227,10.119)
C5': (18.147,26.984,9.167)
P: (16.046,27.627,10.627)
O2: (20.221,21.305,10.454)
C4': (19.051,25.804,8.872)
C2': (19.317,23.487,8.481)
O2': (20.476,23.701,7.651)
N1: (18.966,23.100,10.963)
N3: (18.722,21.011,12.140)
N4: (17.255,20.839,13.871)
C6: (17.916,23.626,11.655)
C5: (17.307,22.918,12.618)
O3': (18.058,24.863,6.871)
Image (generated by PyMOL):