Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2539:A2560
Extra
PDB:
ATOM 1 O3' G A2538 -72.192 -59.521 -36.791 1.00 0.01 O
ATOM 2 P U A2539 -72.002 -58.849 -35.379 1.00 0.01 P
ATOM 3 OP1 U A2539 -70.814 -57.990 -35.468 1.00 0.01 O
ATOM 4 OP2 U A2539 -72.030 -59.921 -34.384 1.00 0.01 O
ATOM 5 O5' U A2539 -73.303 -57.973 -35.255 1.00 0.01 O
ATOM 6 C5' U A2539 -73.316 -56.647 -35.734 1.00 0.01 C
ATOM 7 C4' U A2539 -74.699 -56.096 -35.746 1.00 0.01 C
ATOM 8 O4' U A2539 -75.621 -57.175 -35.962 1.00 0.01 O
ATOM 9 C3' U A2539 -75.158 -55.485 -34.450 1.00 0.01 C
ATOM 10 O3' U A2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 11 C2' U A2539 -76.669 -55.620 -34.518 1.00 0.01 C
ATOM 12 O2' U A2539 -77.250 -54.621 -35.321 1.00 0.01 O
ATOM 13 C1' U A2539 -76.810 -56.937 -35.241 1.00 0.01 C
ATOM 14 N1 U A2539 -77.044 -58.052 -34.315 1.00 0.01 N
ATOM 15 C2 U A2539 -78.338 -58.065 -33.900 1.00 0.01 C
ATOM 16 O2 U A2539 -79.114 -57.202 -34.276 1.00 0.01 O
ATOM 17 N3 U A2539 -78.639 -59.096 -33.072 1.00 0.01 N
ATOM 18 C4 U A2539 -77.790 -60.082 -32.634 1.00 0.01 C
ATOM 19 O4 U A2539 -78.232 -60.946 -31.871 1.00 0.01 O
ATOM 20 C5 U A2539 -76.447 -59.986 -33.124 1.00 0.01 C
ATOM 21 C6 U A2539 -76.122 -58.996 -33.945 1.00 0.01 C
ATOM 22 P A A2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 23 OP1 A A2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 24 OP2 A A2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 25 O5' A A2540 -73.322 -52.409 -33.191 1.00 0.20 O
TER
ATOM 1 O3' A B2559 -79.360 -52.022 -32.467 1.00 0.01 O
ATOM 2 P G B2560 -79.609 -52.257 -30.896 1.00 0.01 P
ATOM 3 OP1 G B2560 -80.095 -50.943 -30.310 1.00 0.01 O
ATOM 4 OP2 G B2560 -78.358 -52.879 -30.353 1.00 0.01 O
ATOM 5 O5' G B2560 -80.791 -53.331 -30.892 1.00 0.01 O
ATOM 6 C5' G B2560 -81.312 -53.848 -32.096 1.00 0.01 C
ATOM 7 C4' G B2560 -82.734 -54.329 -31.929 1.00 0.01 C
ATOM 8 O4' G B2560 -82.919 -55.526 -32.714 1.00 0.01 O
ATOM 9 C3' G B2560 -83.156 -54.724 -30.529 1.00 0.01 C
ATOM 10 O3' G B2560 -83.598 -53.614 -29.772 1.00 0.01 O
ATOM 11 C2' G B2560 -84.248 -55.753 -30.782 1.00 0.01 C
ATOM 12 O2' G B2560 -85.489 -55.130 -31.035 1.00 0.01 O
ATOM 13 C1' G B2560 -83.780 -56.408 -32.072 1.00 0.01 C
ATOM 14 N9 G B2560 -83.061 -57.658 -31.844 1.00 0.01 N
ATOM 15 C8 G B2560 -81.756 -57.906 -32.057 1.00 0.01 C
ATOM 16 N7 G B2560 -81.432 -59.108 -31.730 1.00 0.01 N
ATOM 17 C5 G B2560 -82.606 -59.674 -31.311 1.00 0.01 C
ATOM 18 C6 G B2560 -82.898 -60.963 -30.858 1.00 0.01 C
ATOM 19 O6 G B2560 -82.120 -61.914 -30.754 1.00 0.01 O
ATOM 20 N1 G B2560 -84.241 -61.093 -30.537 1.00 0.01 N
ATOM 21 C2 G B2560 -85.163 -60.106 -30.642 1.00 0.01 C
ATOM 22 N2 G B2560 -86.422 -60.352 -30.298 1.00 0.01 N
ATOM 23 N3 G B2560 -84.882 -58.926 -31.065 1.00 0.01 N
ATOM 24 C4 G B2560 -83.610 -58.791 -31.385 1.00 0.01 C
ATOM 25 P U B2561 -83.357 -53.537 -28.188 1.00 0.01 P
ATOM 26 OP1 U B2561 -83.655 -52.164 -27.774 1.00 0.01 O
ATOM 27 OP2 U B2561 -82.000 -54.092 -27.904 1.00 0.01 O
ATOM 28 O5' U B2561 -84.462 -54.505 -27.622 1.00 0.01 O
TER
ATOM 2 P U A2539 -72.002 -58.849 -35.379 1.00 0.01 P
ATOM 3 OP1 U A2539 -70.814 -57.990 -35.468 1.00 0.01 O
ATOM 4 OP2 U A2539 -72.030 -59.921 -34.384 1.00 0.01 O
ATOM 5 O5' U A2539 -73.303 -57.973 -35.255 1.00 0.01 O
ATOM 6 C5' U A2539 -73.316 -56.647 -35.734 1.00 0.01 C
ATOM 7 C4' U A2539 -74.699 -56.096 -35.746 1.00 0.01 C
ATOM 8 O4' U A2539 -75.621 -57.175 -35.962 1.00 0.01 O
ATOM 9 C3' U A2539 -75.158 -55.485 -34.450 1.00 0.01 C
ATOM 10 O3' U A2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 11 C2' U A2539 -76.669 -55.620 -34.518 1.00 0.01 C
ATOM 12 O2' U A2539 -77.250 -54.621 -35.321 1.00 0.01 O
ATOM 13 C1' U A2539 -76.810 -56.937 -35.241 1.00 0.01 C
ATOM 14 N1 U A2539 -77.044 -58.052 -34.315 1.00 0.01 N
ATOM 15 C2 U A2539 -78.338 -58.065 -33.900 1.00 0.01 C
ATOM 16 O2 U A2539 -79.114 -57.202 -34.276 1.00 0.01 O
ATOM 17 N3 U A2539 -78.639 -59.096 -33.072 1.00 0.01 N
ATOM 18 C4 U A2539 -77.790 -60.082 -32.634 1.00 0.01 C
ATOM 19 O4 U A2539 -78.232 -60.946 -31.871 1.00 0.01 O
ATOM 20 C5 U A2539 -76.447 -59.986 -33.124 1.00 0.01 C
ATOM 21 C6 U A2539 -76.122 -58.996 -33.945 1.00 0.01 C
ATOM 22 P A A2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 23 OP1 A A2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 24 OP2 A A2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 25 O5' A A2540 -73.322 -52.409 -33.191 1.00 0.20 O
TER
ATOM 1 O3' A B2559 -79.360 -52.022 -32.467 1.00 0.01 O
ATOM 2 P G B2560 -79.609 -52.257 -30.896 1.00 0.01 P
ATOM 3 OP1 G B2560 -80.095 -50.943 -30.310 1.00 0.01 O
ATOM 4 OP2 G B2560 -78.358 -52.879 -30.353 1.00 0.01 O
ATOM 5 O5' G B2560 -80.791 -53.331 -30.892 1.00 0.01 O
ATOM 6 C5' G B2560 -81.312 -53.848 -32.096 1.00 0.01 C
ATOM 7 C4' G B2560 -82.734 -54.329 -31.929 1.00 0.01 C
ATOM 8 O4' G B2560 -82.919 -55.526 -32.714 1.00 0.01 O
ATOM 9 C3' G B2560 -83.156 -54.724 -30.529 1.00 0.01 C
ATOM 10 O3' G B2560 -83.598 -53.614 -29.772 1.00 0.01 O
ATOM 11 C2' G B2560 -84.248 -55.753 -30.782 1.00 0.01 C
ATOM 12 O2' G B2560 -85.489 -55.130 -31.035 1.00 0.01 O
ATOM 13 C1' G B2560 -83.780 -56.408 -32.072 1.00 0.01 C
ATOM 14 N9 G B2560 -83.061 -57.658 -31.844 1.00 0.01 N
ATOM 15 C8 G B2560 -81.756 -57.906 -32.057 1.00 0.01 C
ATOM 16 N7 G B2560 -81.432 -59.108 -31.730 1.00 0.01 N
ATOM 17 C5 G B2560 -82.606 -59.674 -31.311 1.00 0.01 C
ATOM 18 C6 G B2560 -82.898 -60.963 -30.858 1.00 0.01 C
ATOM 19 O6 G B2560 -82.120 -61.914 -30.754 1.00 0.01 O
ATOM 20 N1 G B2560 -84.241 -61.093 -30.537 1.00 0.01 N
ATOM 21 C2 G B2560 -85.163 -60.106 -30.642 1.00 0.01 C
ATOM 22 N2 G B2560 -86.422 -60.352 -30.298 1.00 0.01 N
ATOM 23 N3 G B2560 -84.882 -58.926 -31.065 1.00 0.01 N
ATOM 24 C4 G B2560 -83.610 -58.791 -31.385 1.00 0.01 C
ATOM 25 P U B2561 -83.357 -53.537 -28.188 1.00 0.01 P
ATOM 26 OP1 U B2561 -83.655 -52.164 -27.774 1.00 0.01 O
ATOM 27 OP2 U B2561 -82.000 -54.092 -27.904 1.00 0.01 O
ATOM 28 O5' U B2561 -84.462 -54.505 -27.622 1.00 0.01 O
TER
Atoms:
C4: (-77.790,-60.082,-32.634)
N3: (-78.639,-59.096,-33.072)
OP1: (-70.814,-57.990,-35.468)
OP2: (-72.030,-59.921,-34.384)
C2: (-78.338,-58.065,-33.900)
C1': (-76.810,-56.937,-35.241)
C3': (-75.158,-55.485,-34.450)
O5': (-73.303,-57.973,-35.255)
O4': (-75.621,-57.175,-35.962)
C5': (-73.316,-56.647,-35.734)
P: (-72.002,-58.849,-35.379)
C4': (-74.699,-56.096,-35.746)
C2': (-76.669,-55.620,-34.518)
O2': (-77.250,-54.621,-35.321)
N1: (-77.044,-58.052,-34.315)
O4: (-78.232,-60.946,-31.871)
O2: (-79.114,-57.202,-34.276)
C6: (-76.122,-58.996,-33.945)
C5: (-76.447,-59.986,-33.124)
O3': (-74.701,-54.175,-34.268)
N3: (-78.639,-59.096,-33.072)
OP1: (-70.814,-57.990,-35.468)
OP2: (-72.030,-59.921,-34.384)
C2: (-78.338,-58.065,-33.900)
C1': (-76.810,-56.937,-35.241)
C3': (-75.158,-55.485,-34.450)
O5': (-73.303,-57.973,-35.255)
O4': (-75.621,-57.175,-35.962)
C5': (-73.316,-56.647,-35.734)
P: (-72.002,-58.849,-35.379)
C4': (-74.699,-56.096,-35.746)
C2': (-76.669,-55.620,-34.518)
O2': (-77.250,-54.621,-35.321)
N1: (-77.044,-58.052,-34.315)
O4: (-78.232,-60.946,-31.871)
O2: (-79.114,-57.202,-34.276)
C6: (-76.122,-58.996,-33.945)
C5: (-76.447,-59.986,-33.124)
O3': (-74.701,-54.175,-34.268)
OP1: (-80.095,-50.943,-30.310)
OP2: (-78.358,-52.879,-30.353)
C3': (-83.156,-54.724,-30.529)
C1': (-83.780,-56.408,-32.072)
C5': (-81.312,-53.848,-32.096)
O6: (-82.120,-61.914,-30.754)
O4': (-82.919,-55.526,-32.714)
C8: (-81.756,-57.906,-32.057)
C2: (-85.163,-60.106,-30.642)
C6: (-82.898,-60.963,-30.858)
C5: (-82.606,-59.674,-31.311)
C4: (-83.610,-58.791,-31.385)
P: (-79.609,-52.257,-30.896)
C4': (-82.734,-54.329,-31.929)
C2': (-84.248,-55.753,-30.782)
O2': (-85.489,-55.130,-31.035)
N1: (-84.241,-61.093,-30.537)
N2: (-86.422,-60.352,-30.298)
N3: (-84.882,-58.926,-31.065)
N7: (-81.432,-59.108,-31.730)
N9: (-83.061,-57.658,-31.844)
O5': (-80.791,-53.331,-30.892)
O3': (-83.598,-53.614,-29.772)
OP2: (-78.358,-52.879,-30.353)
C3': (-83.156,-54.724,-30.529)
C1': (-83.780,-56.408,-32.072)
C5': (-81.312,-53.848,-32.096)
O6: (-82.120,-61.914,-30.754)
O4': (-82.919,-55.526,-32.714)
C8: (-81.756,-57.906,-32.057)
C2: (-85.163,-60.106,-30.642)
C6: (-82.898,-60.963,-30.858)
C5: (-82.606,-59.674,-31.311)
C4: (-83.610,-58.791,-31.385)
P: (-79.609,-52.257,-30.896)
C4': (-82.734,-54.329,-31.929)
C2': (-84.248,-55.753,-30.782)
O2': (-85.489,-55.130,-31.035)
N1: (-84.241,-61.093,-30.537)
N2: (-86.422,-60.352,-30.298)
N3: (-84.882,-58.926,-31.065)
N7: (-81.432,-59.108,-31.730)
N9: (-83.061,-57.658,-31.844)
O5': (-80.791,-53.331,-30.892)
O3': (-83.598,-53.614,-29.772)
Image (generated by PyMOL):