Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1237:1239
Extra
PDB:
ATOM 1 O3' G A 236 78.243 -24.841 138.565 1.00104.25 O
ATOM 2 P U A 237 77.544 -26.108 137.875 1.00152.84 P
ATOM 3 OP1 U A 237 78.385 -26.563 136.742 1.00152.54 O
ATOM 4 OP2 U A 237 76.141 -25.723 137.605 1.00152.37 O
ATOM 5 O5' U A 237 77.600 -27.167 139.056 1.00153.53 O
ATOM 6 C5' U A 237 77.459 -28.547 138.803 1.00153.52 C
ATOM 7 C4' U A 237 78.731 -29.157 138.271 1.00153.62 C
ATOM 8 O4' U A 237 79.816 -28.175 138.259 1.00153.75 O
ATOM 9 C3' U A 237 79.250 -30.351 139.057 1.00154.26 C
ATOM 10 O3' U A 237 79.835 -31.268 138.141 1.00154.07 O
ATOM 11 C2' U A 237 80.350 -29.715 139.914 1.00154.86 C
ATOM 12 O2' U A 237 81.313 -30.618 140.425 1.00155.45 O
ATOM 13 C1' U A 237 80.945 -28.735 138.909 1.00154.39 C
ATOM 14 N1 U A 237 81.780 -27.630 139.502 1.00154.76 N
ATOM 15 C2 U A 237 83.165 -27.637 139.269 1.00154.98 C
ATOM 16 O2 U A 237 83.755 -28.497 138.628 1.00154.91 O
ATOM 17 N3 U A 237 83.876 -26.595 139.824 1.00155.32 N
ATOM 18 C4 U A 237 83.373 -25.550 140.570 1.00155.47 C
ATOM 19 O4 U A 237 84.140 -24.685 140.996 1.00155.79 O
ATOM 20 C5 U A 237 81.955 -25.593 140.767 1.00155.22 C
ATOM 21 C6 U A 237 81.237 -26.596 140.243 1.00154.89 C
ATOM 22 P G A 238 78.920 -32.209 137.200 1.00119.81 P
ATOM 23 OP1 G A 238 77.883 -31.348 136.552 1.00119.16 O
ATOM 24 OP2 G A 238 78.478 -33.372 138.032 1.00120.27 O
ATOM 25 O5' G A 238 79.976 -32.671 136.114 1.00119.60 O
TER
ATOM 1 O3' G B 238 82.944 -34.143 134.592 1.00119.82 O
ATOM 2 P C B 239 83.888 -34.856 135.673 1.00139.70 P
ATOM 3 OP1 C B 239 83.750 -36.322 135.494 1.00139.82 O
ATOM 4 OP2 C B 239 83.563 -34.265 137.001 1.00140.15 O
ATOM 5 O5' C B 239 85.324 -34.390 135.197 1.00139.77 O
ATOM 6 C5' C B 239 85.840 -34.773 133.926 1.00139.38 C
ATOM 7 C4' C B 239 87.332 -34.733 133.942 1.00139.77 C
ATOM 8 O4' C B 239 87.744 -33.335 133.936 1.00139.66 O
ATOM 9 C3' C B 239 87.930 -35.355 135.200 1.00140.60 C
ATOM 10 O3' C B 239 89.190 -35.967 134.929 1.00140.92 O
ATOM 11 C2' C B 239 88.111 -34.155 136.118 1.00140.90 C
ATOM 12 O2' C B 239 89.104 -34.300 137.117 1.00141.66 O
ATOM 13 C1' C B 239 88.426 -33.023 135.135 1.00140.35 C
ATOM 14 N1 C B 239 87.944 -31.719 135.629 1.00140.27 N
ATOM 15 C2 C B 239 88.698 -30.535 135.590 1.00140.30 C
ATOM 16 O2 C B 239 89.800 -30.506 135.009 1.00140.32 O
ATOM 17 N3 C B 239 88.156 -29.425 136.170 1.00140.29 N
ATOM 18 C4 C B 239 86.960 -29.476 136.795 1.00140.27 C
ATOM 19 N4 C B 239 86.462 -28.365 137.353 1.00140.28 N
ATOM 20 C5 C B 239 86.203 -30.678 136.876 1.00140.26 C
ATOM 21 C6 C B 239 86.743 -31.754 136.299 1.00140.27 C
ATOM 22 P G B 240 89.913 -36.837 136.085 1.00120.49 P
ATOM 23 OP1 G B 240 90.368 -38.110 135.458 1.00120.55 O
ATOM 24 OP2 G B 240 88.956 -36.905 137.243 1.00120.79 O
ATOM 25 O5' G B 240 91.183 -35.925 136.448 1.00120.87 O
TER
ATOM 2 P U A 237 77.544 -26.108 137.875 1.00152.84 P
ATOM 3 OP1 U A 237 78.385 -26.563 136.742 1.00152.54 O
ATOM 4 OP2 U A 237 76.141 -25.723 137.605 1.00152.37 O
ATOM 5 O5' U A 237 77.600 -27.167 139.056 1.00153.53 O
ATOM 6 C5' U A 237 77.459 -28.547 138.803 1.00153.52 C
ATOM 7 C4' U A 237 78.731 -29.157 138.271 1.00153.62 C
ATOM 8 O4' U A 237 79.816 -28.175 138.259 1.00153.75 O
ATOM 9 C3' U A 237 79.250 -30.351 139.057 1.00154.26 C
ATOM 10 O3' U A 237 79.835 -31.268 138.141 1.00154.07 O
ATOM 11 C2' U A 237 80.350 -29.715 139.914 1.00154.86 C
ATOM 12 O2' U A 237 81.313 -30.618 140.425 1.00155.45 O
ATOM 13 C1' U A 237 80.945 -28.735 138.909 1.00154.39 C
ATOM 14 N1 U A 237 81.780 -27.630 139.502 1.00154.76 N
ATOM 15 C2 U A 237 83.165 -27.637 139.269 1.00154.98 C
ATOM 16 O2 U A 237 83.755 -28.497 138.628 1.00154.91 O
ATOM 17 N3 U A 237 83.876 -26.595 139.824 1.00155.32 N
ATOM 18 C4 U A 237 83.373 -25.550 140.570 1.00155.47 C
ATOM 19 O4 U A 237 84.140 -24.685 140.996 1.00155.79 O
ATOM 20 C5 U A 237 81.955 -25.593 140.767 1.00155.22 C
ATOM 21 C6 U A 237 81.237 -26.596 140.243 1.00154.89 C
ATOM 22 P G A 238 78.920 -32.209 137.200 1.00119.81 P
ATOM 23 OP1 G A 238 77.883 -31.348 136.552 1.00119.16 O
ATOM 24 OP2 G A 238 78.478 -33.372 138.032 1.00120.27 O
ATOM 25 O5' G A 238 79.976 -32.671 136.114 1.00119.60 O
TER
ATOM 1 O3' G B 238 82.944 -34.143 134.592 1.00119.82 O
ATOM 2 P C B 239 83.888 -34.856 135.673 1.00139.70 P
ATOM 3 OP1 C B 239 83.750 -36.322 135.494 1.00139.82 O
ATOM 4 OP2 C B 239 83.563 -34.265 137.001 1.00140.15 O
ATOM 5 O5' C B 239 85.324 -34.390 135.197 1.00139.77 O
ATOM 6 C5' C B 239 85.840 -34.773 133.926 1.00139.38 C
ATOM 7 C4' C B 239 87.332 -34.733 133.942 1.00139.77 C
ATOM 8 O4' C B 239 87.744 -33.335 133.936 1.00139.66 O
ATOM 9 C3' C B 239 87.930 -35.355 135.200 1.00140.60 C
ATOM 10 O3' C B 239 89.190 -35.967 134.929 1.00140.92 O
ATOM 11 C2' C B 239 88.111 -34.155 136.118 1.00140.90 C
ATOM 12 O2' C B 239 89.104 -34.300 137.117 1.00141.66 O
ATOM 13 C1' C B 239 88.426 -33.023 135.135 1.00140.35 C
ATOM 14 N1 C B 239 87.944 -31.719 135.629 1.00140.27 N
ATOM 15 C2 C B 239 88.698 -30.535 135.590 1.00140.30 C
ATOM 16 O2 C B 239 89.800 -30.506 135.009 1.00140.32 O
ATOM 17 N3 C B 239 88.156 -29.425 136.170 1.00140.29 N
ATOM 18 C4 C B 239 86.960 -29.476 136.795 1.00140.27 C
ATOM 19 N4 C B 239 86.462 -28.365 137.353 1.00140.28 N
ATOM 20 C5 C B 239 86.203 -30.678 136.876 1.00140.26 C
ATOM 21 C6 C B 239 86.743 -31.754 136.299 1.00140.27 C
ATOM 22 P G B 240 89.913 -36.837 136.085 1.00120.49 P
ATOM 23 OP1 G B 240 90.368 -38.110 135.458 1.00120.55 O
ATOM 24 OP2 G B 240 88.956 -36.905 137.243 1.00120.79 O
ATOM 25 O5' G B 240 91.183 -35.925 136.448 1.00120.87 O
TER
Atoms:
C4: (83.373,-25.550,140.570)
N3: (83.876,-26.595,139.824)
OP1: (78.385,-26.563,136.742)
OP2: (76.141,-25.723,137.605)
C2: (83.165,-27.637,139.269)
C1': (80.945,-28.735,138.909)
C3': (79.250,-30.351,139.057)
O5': (77.600,-27.167,139.056)
O4': (79.816,-28.175,138.259)
C5': (77.459,-28.547,138.803)
P: (77.544,-26.108,137.875)
C4': (78.731,-29.157,138.271)
C2': (80.350,-29.715,139.914)
O2': (81.313,-30.618,140.425)
N1: (81.780,-27.630,139.502)
O4: (84.140,-24.685,140.996)
O2: (83.755,-28.497,138.628)
C6: (81.237,-26.596,140.243)
C5: (81.955,-25.593,140.767)
O3': (79.835,-31.268,138.141)
N3: (83.876,-26.595,139.824)
OP1: (78.385,-26.563,136.742)
OP2: (76.141,-25.723,137.605)
C2: (83.165,-27.637,139.269)
C1': (80.945,-28.735,138.909)
C3': (79.250,-30.351,139.057)
O5': (77.600,-27.167,139.056)
O4': (79.816,-28.175,138.259)
C5': (77.459,-28.547,138.803)
P: (77.544,-26.108,137.875)
C4': (78.731,-29.157,138.271)
C2': (80.350,-29.715,139.914)
O2': (81.313,-30.618,140.425)
N1: (81.780,-27.630,139.502)
O4: (84.140,-24.685,140.996)
O2: (83.755,-28.497,138.628)
C6: (81.237,-26.596,140.243)
C5: (81.955,-25.593,140.767)
O3': (79.835,-31.268,138.141)
C2: (88.698,-30.535,135.590)
OP1: (83.750,-36.322,135.494)
OP2: (83.563,-34.265,137.001)
C4: (86.960,-29.476,136.795)
O5': (85.324,-34.390,135.197)
C3': (87.930,-35.355,135.200)
C1': (88.426,-33.023,135.135)
O4': (87.744,-33.335,133.936)
C5': (85.840,-34.773,133.926)
P: (83.888,-34.856,135.673)
O2: (89.800,-30.506,135.009)
C4': (87.332,-34.733,133.942)
C2': (88.111,-34.155,136.118)
O2': (89.104,-34.300,137.117)
N1: (87.944,-31.719,135.629)
N3: (88.156,-29.425,136.170)
N4: (86.462,-28.365,137.353)
C6: (86.743,-31.754,136.299)
C5: (86.203,-30.678,136.876)
O3': (89.190,-35.967,134.929)
OP1: (83.750,-36.322,135.494)
OP2: (83.563,-34.265,137.001)
C4: (86.960,-29.476,136.795)
O5': (85.324,-34.390,135.197)
C3': (87.930,-35.355,135.200)
C1': (88.426,-33.023,135.135)
O4': (87.744,-33.335,133.936)
C5': (85.840,-34.773,133.926)
P: (83.888,-34.856,135.673)
O2: (89.800,-30.506,135.009)
C4': (87.332,-34.733,133.942)
C2': (88.111,-34.155,136.118)
O2': (89.104,-34.300,137.117)
N1: (87.944,-31.719,135.629)
N3: (88.156,-29.425,136.170)
N4: (86.462,-28.365,137.353)
C6: (86.743,-31.754,136.299)
C5: (86.203,-30.678,136.876)
O3': (89.190,-35.967,134.929)
Image (generated by PyMOL):