ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A403:A405

Extra

PDB:
ATOM 1 O3' U A 402 -93.379 -36.104 62.720 1.00 16.89 O
ATOM 2 P G A 403 -94.223 -35.232 63.777 1.00 16.19 P
ATOM 3 OP1 G A 403 -95.650 -35.585 63.503 1.00 0.79 O
ATOM 4 OP2 G A 403 -93.803 -33.804 63.794 1.00 0.79 O
ATOM 5 O5' G A 403 -93.846 -35.878 65.175 1.00 34.13 O
ATOM 6 C5' G A 403 -94.724 -35.767 66.296 1.00 34.13 C
ATOM 7 C4' G A 403 -95.135 -37.137 66.752 1.00 34.13 C
ATOM 8 O4' G A 403 -94.053 -38.060 66.515 1.00 34.13 O
ATOM 9 C3' G A 403 -95.428 -37.203 68.232 1.00 34.13 C
ATOM 10 O3' G A 403 -96.803 -36.887 68.449 1.00 34.13 O
ATOM 11 C2' G A 403 -95.055 -38.636 68.585 1.00 34.13 C
ATOM 12 O2' G A 403 -96.090 -39.531 68.252 1.00 34.13 O
ATOM 13 C1' G A 403 -93.894 -38.903 67.626 1.00 34.13 C
ATOM 14 N9 G A 403 -92.548 -38.672 68.132 1.00 24.52 N
ATOM 15 C8 G A 403 -92.138 -37.737 69.044 1.00 24.52 C
ATOM 16 N7 G A 403 -90.848 -37.746 69.240 1.00 24.52 N
ATOM 17 C5 G A 403 -90.383 -38.752 68.413 1.00 24.52 C
ATOM 18 C6 G A 403 -89.070 -39.215 68.188 1.00 24.52 C
ATOM 19 O6 G A 403 -88.010 -38.813 68.686 1.00 24.52 O
ATOM 20 N1 G A 403 -89.048 -40.260 67.273 1.00 24.52 N
ATOM 21 C2 G A 403 -90.148 -40.792 66.653 1.00 24.52 C
ATOM 22 N2 G A 403 -89.920 -41.818 65.801 1.00 24.52 N
ATOM 23 N3 G A 403 -91.380 -40.358 66.850 1.00 24.52 N
ATOM 24 C4 G A 403 -91.422 -39.343 67.737 1.00 24.52 C
ATOM 25 P G A 404 -97.201 -35.458 69.080 1.00 36.76 P
ATOM 26 OP1 G A 404 -98.658 -35.255 68.852 1.00 36.76 O
ATOM 27 OP2 G A 404 -96.211 -34.436 68.587 1.00 36.76 O
ATOM 28 O5' G A 404 -96.969 -35.661 70.648 1.00 27.19 O
TER

ATOM 1 O3' G B 404 -94.432 -34.518 73.433 1.00 27.19 O
ATOM 2 P A B 405 -92.999 -34.335 72.735 1.00 47.66 P
ATOM 3 OP1 A B 405 -92.353 -33.149 73.357 1.00 48.04 O
ATOM 4 OP2 A B 405 -93.199 -34.381 71.272 1.00 48.04 O
ATOM 5 O5' A B 405 -92.177 -35.624 73.171 1.00 14.83 O
ATOM 6 C5' A B 405 -91.731 -35.772 74.526 1.00 14.83 C
ATOM 7 C4' A B 405 -90.554 -36.703 74.587 1.00 14.83 C
ATOM 8 O4' A B 405 -90.990 -38.053 74.292 1.00 14.83 O
ATOM 9 C3' A B 405 -89.453 -36.372 73.602 1.00 14.83 C
ATOM 10 O3' A B 405 -88.228 -36.644 74.260 1.00 14.83 O
ATOM 11 C2' A B 405 -89.722 -37.327 72.436 1.00 14.83 C
ATOM 12 O2' A B 405 -88.570 -37.729 71.720 1.00 14.83 O
ATOM 13 C1' A B 405 -90.329 -38.535 73.140 1.00 14.83 C
ATOM 14 N9 A B 405 -91.318 -39.243 72.324 1.00 22.40 N
ATOM 15 C8 A B 405 -92.686 -39.063 72.328 1.00 22.40 C
ATOM 16 N7 A B 405 -93.333 -39.881 71.530 1.00 22.40 N
ATOM 17 C5 A B 405 -92.326 -40.637 70.956 1.00 22.40 C
ATOM 18 C6 A B 405 -92.362 -41.676 70.047 1.00 22.40 C
ATOM 19 N6 A B 405 -93.489 -42.147 69.518 1.00 22.40 N
ATOM 20 N1 A B 405 -91.194 -42.232 69.687 1.00 22.40 N
ATOM 21 C2 A B 405 -90.066 -41.749 70.214 1.00 22.40 C
ATOM 22 N3 A B 405 -89.901 -40.764 71.078 1.00 22.40 N
ATOM 23 C4 A B 405 -91.083 -40.246 71.420 1.00 22.40 C
ATOM 24 P G B 406 -87.345 -35.429 74.828 1.00 57.84 P
ATOM 25 OP1 G B 406 -88.224 -34.234 74.993 1.00 66.88 O
ATOM 26 OP2 G B 406 -86.123 -35.325 73.998 1.00 66.88 O
ATOM 27 O5' G B 406 -86.910 -35.936 76.269 1.00 29.69 O
TER

Atoms:
OP1: (-95.650,-35.585,63.503)
OP2: (-93.803,-33.804,63.794)
C3': (-95.428,-37.203,68.232)
C1': (-93.894,-38.903,67.626)
C5': (-94.724,-35.767,66.296)
O6: (-88.010,-38.813,68.686)
O4': (-94.053,-38.060,66.515)
C8: (-92.138,-37.737,69.044)
C2: (-90.148,-40.792,66.653)
C6: (-89.070,-39.215,68.188)
C5: (-90.383,-38.752,68.413)
C4: (-91.422,-39.343,67.737)
P: (-94.223,-35.232,63.777)
C4': (-95.135,-37.137,66.752)
C2': (-95.055,-38.636,68.585)
O2': (-96.090,-39.531,68.252)
N1: (-89.048,-40.260,67.273)
N2: (-89.920,-41.818,65.801)
N3: (-91.380,-40.358,66.850)
N7: (-90.848,-37.746,69.240)
N9: (-92.548,-38.672,68.132)
O5': (-93.846,-35.878,65.175)
O3': (-96.803,-36.887,68.449)
OP1: (-92.353,-33.149,73.357)
OP2: (-93.199,-34.381,71.272)
C3': (-89.453,-36.372,73.602)
C1': (-90.329,-38.535,73.140)
C5': (-91.731,-35.772,74.526)
O4': (-90.990,-38.053,74.292)
C8: (-92.686,-39.063,72.328)
O2': (-88.570,-37.729,71.720)
C6: (-92.362,-41.676,70.047)
C5: (-92.326,-40.637,70.956)
C4: (-91.083,-40.246,71.420)
P: (-92.999,-34.335,72.735)
C4': (-90.554,-36.703,74.587)
C2': (-89.722,-37.327,72.436)
C2: (-90.066,-41.749,70.214)
N1: (-91.194,-42.232,69.687)
N3: (-89.901,-40.764,71.078)
N6: (-93.489,-42.147,69.518)
N7: (-93.333,-39.881,71.530)
N9: (-91.318,-39.243,72.324)
O5': (-92.177,-35.624,73.171)
O3': (-88.228,-36.644,74.260)
Image (generated by PyMOL):
PyMOL image
show in jmol