ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01030:01029

Extra

PDB:
ATOM 1 O3' A A1029 40.868 101.616 90.803 1.00 34.75 O
ATOM 2 P G A1030 40.236 101.936 89.369 1.00 35.06 P
ATOM 3 OP1 G A1030 40.992 101.147 88.363 1.00 29.64 O
ATOM 4 OP2 G A1030 40.140 103.411 89.231 1.00 35.01 O
ATOM 5 O5' G A1030 38.761 101.352 89.479 1.00 37.13 O
ATOM 6 C5' G A1030 37.713 101.810 88.612 1.00 35.44 C
ATOM 7 C4' G A1030 36.625 100.770 88.540 1.00 34.49 C
ATOM 8 O4' G A1030 37.114 99.620 87.810 1.00 33.00 O
ATOM 9 C3' G A1030 36.139 100.246 89.881 1.00 33.82 C
ATOM 10 O3' G A1030 34.768 99.928 89.761 1.00 32.50 O
ATOM 11 C2' G A1030 36.974 98.986 90.064 1.00 33.11 C
ATOM 12 O2' G A1030 36.329 98.047 90.893 1.00 31.91 O
ATOM 13 C1' G A1030 37.077 98.475 88.628 1.00 33.02 C
ATOM 14 N9 G A1030 38.290 97.704 88.355 1.00 34.78 N
ATOM 15 C8 G A1030 39.551 98.206 88.156 1.00 32.11 C
ATOM 16 N7 G A1030 40.442 97.280 87.948 1.00 33.98 N
ATOM 17 C5 G A1030 39.729 96.093 88.007 1.00 35.22 C
ATOM 18 C6 G A1030 40.165 94.753 87.861 1.00 35.37 C
ATOM 19 O6 G A1030 41.311 94.330 87.663 1.00 37.19 O
ATOM 20 N1 G A1030 39.114 93.861 87.981 1.00 34.92 N
ATOM 21 C2 G A1030 37.812 94.207 88.219 1.00 36.19 C
ATOM 22 N2 G A1030 36.933 93.190 88.306 1.00 37.71 N
ATOM 23 N3 G A1030 37.395 95.452 88.363 1.00 35.33 N
ATOM 24 C4 G A1030 38.398 96.336 88.248 1.00 33.93 C
ATOM 25 P G A1031 33.687 101.109 89.725 1.00 34.11 P
ATOM 26 OP1 G A1031 32.936 100.916 88.468 1.00 32.22 O
ATOM 27 OP2 G A1031 34.365 102.416 89.995 1.00 32.05 O
ATOM 28 O5' G A1031 32.750 100.793 90.969 1.00 35.55 O
TER

ATOM 1 O3' C B1028 37.527 99.403 95.554 1.00 37.20 O
ATOM 2 P A B1029 37.139 99.787 94.047 1.00 38.01 P
ATOM 3 OP1 A B1029 36.478 101.119 94.084 1.00 36.26 O
ATOM 4 OP2 A B1029 36.429 98.630 93.461 1.00 36.40 O
ATOM 5 O5' A B1029 38.534 99.862 93.277 1.00 36.74 O
ATOM 6 C5' A B1029 39.573 100.793 93.643 1.00 34.19 C
ATOM 7 C4' A B1029 40.847 100.448 92.899 1.00 35.13 C
ATOM 8 O4' A B1029 41.302 99.133 93.310 1.00 34.15 O
ATOM 9 C3' A B1029 40.677 100.344 91.390 1.00 34.33 C
ATOM 10 O3' A B1029 40.868 101.616 90.803 1.00 34.75 O
ATOM 11 C2' A B1029 41.758 99.352 90.981 1.00 34.22 C
ATOM 12 O2' A B1029 43.023 99.959 90.828 1.00 35.98 O
ATOM 13 C1' A B1029 41.773 98.405 92.184 1.00 34.72 C
ATOM 14 N9 A B1029 40.915 97.233 92.016 1.00 34.14 N
ATOM 15 C8 A B1029 39.582 97.142 92.310 1.00 33.33 C
ATOM 16 N7 A B1029 39.062 95.974 92.036 1.00 35.00 N
ATOM 17 C5 A B1029 40.124 95.244 91.534 1.00 32.95 C
ATOM 18 C6 A B1029 40.215 93.936 91.059 1.00 33.79 C
ATOM 19 N6 A B1029 39.179 93.096 91.019 1.00 33.44 N
ATOM 20 N1 A B1029 41.417 93.507 90.621 1.00 34.72 N
ATOM 21 C2 A B1029 42.456 94.350 90.672 1.00 35.93 C
ATOM 22 N3 A B1029 42.494 95.605 91.105 1.00 37.52 N
ATOM 23 C4 A B1029 41.275 96.000 91.523 1.00 34.70 C
ATOM 24 P G B1030 40.236 101.936 89.369 1.00 35.06 P
ATOM 25 OP1 G B1030 40.992 101.147 88.363 1.00 29.64 O
ATOM 26 OP2 G B1030 40.140 103.411 89.231 1.00 35.01 O
ATOM 27 O5' G B1030 38.761 101.352 89.479 1.00 37.13 O
TER

Atoms:
OP1: (40.992,101.147,88.363)
OP2: (40.140,103.411,89.231)
C3': (36.139,100.246,89.881)
C1': (37.077,98.475,88.628)
C5': (37.713,101.810,88.612)
O6: (41.311,94.330,87.663)
O4': (37.114,99.620,87.810)
C8: (39.551,98.206,88.156)
C2: (37.812,94.207,88.219)
C6: (40.165,94.753,87.861)
C5: (39.729,96.093,88.007)
C4: (38.398,96.336,88.248)
P: (40.236,101.936,89.369)
C4': (36.625,100.770,88.540)
C2': (36.974,98.986,90.064)
O2': (36.329,98.047,90.893)
N1: (39.114,93.861,87.981)
N2: (36.933,93.190,88.306)
N3: (37.395,95.452,88.363)
N7: (40.442,97.280,87.948)
N9: (38.290,97.704,88.355)
O5': (38.761,101.352,89.479)
O3': (34.768,99.928,89.761)
OP1: (36.478,101.119,94.084)
OP2: (36.429,98.630,93.461)
C3': (40.677,100.344,91.390)
C1': (41.773,98.405,92.184)
C5': (39.573,100.793,93.643)
O4': (41.302,99.133,93.310)
C8: (39.582,97.142,92.310)
O2': (43.023,99.959,90.828)
C6: (40.215,93.936,91.059)
C5: (40.124,95.244,91.534)
C4: (41.275,96.000,91.523)
P: (37.139,99.787,94.047)
C4': (40.847,100.448,92.899)
C2': (41.758,99.352,90.981)
C2: (42.456,94.350,90.672)
N1: (41.417,93.507,90.621)
N3: (42.494,95.605,91.105)
N6: (39.179,93.096,91.019)
N7: (39.062,95.974,92.036)
N9: (40.915,97.233,92.016)
O5': (38.534,99.862,93.277)
O3': (40.868,101.616,90.803)
Image (generated by PyMOL):
PyMOL image
show in jmol