Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0102:0104
Extra
PDB:
ATOM 1 O3' C A 101 75.663 151.416 38.744 1.00 32.49 O
ATOM 2 P G A 102 76.354 150.164 38.011 1.00 31.57 P
ATOM 3 OP1 G A 102 77.379 149.599 38.910 1.00 30.78 O
ATOM 4 OP2 G A 102 76.739 150.581 36.650 1.00 32.50 O
ATOM 5 O5' G A 102 75.194 149.087 37.906 1.00 32.32 O
ATOM 6 C5' G A 102 74.758 148.368 39.064 1.00 34.37 C
ATOM 7 C4' G A 102 73.602 147.478 38.710 1.00 36.05 C
ATOM 8 O4' G A 102 72.543 148.287 38.145 1.00 37.66 O
ATOM 9 C3' G A 102 73.888 146.439 37.643 1.00 35.58 C
ATOM 10 O3' G A 102 74.454 145.289 38.239 1.00 35.37 O
ATOM 11 C2' G A 102 72.496 146.154 37.104 1.00 38.33 C
ATOM 12 O2' G A 102 71.748 145.310 37.962 1.00 37.29 O
ATOM 13 C1' G A 102 71.876 147.553 37.135 1.00 40.21 C
ATOM 14 N9 G A 102 71.988 148.296 35.883 1.00 43.27 N
ATOM 15 C8 G A 102 72.967 149.195 35.536 1.00 44.27 C
ATOM 16 N7 G A 102 72.776 149.733 34.362 1.00 44.93 N
ATOM 17 C5 G A 102 71.607 149.147 33.901 1.00 44.20 C
ATOM 18 C6 G A 102 70.902 149.339 32.688 1.00 44.17 C
ATOM 19 O6 G A 102 71.171 150.098 31.747 1.00 43.48 O
ATOM 20 N1 G A 102 69.773 148.531 32.625 1.00 43.99 N
ATOM 21 C2 G A 102 69.373 147.654 33.604 1.00 43.29 C
ATOM 22 N2 G A 102 68.264 146.950 33.355 1.00 43.59 N
ATOM 23 N3 G A 102 70.014 147.477 34.740 1.00 43.05 N
ATOM 24 C4 G A 102 71.115 148.249 34.822 1.00 43.67 C
ATOM 25 P A A 103 75.885 144.765 37.762 1.00 36.00 P
ATOM 26 OP1 A A 103 76.390 143.898 38.844 1.00 34.99 O
ATOM 27 OP2 A A 103 76.699 145.911 37.309 1.00 35.66 O
ATOM 28 O5' A A 103 75.560 143.853 36.500 1.00 38.14 O
TER
ATOM 1 O3' A B 103 78.150 141.590 35.707 1.00 38.34 O
ATOM 2 P A B 104 79.629 142.099 35.344 1.00 40.91 P
ATOM 3 OP1 A B 104 80.244 141.139 34.377 1.00 36.35 O
ATOM 4 OP2 A B 104 80.336 142.408 36.610 1.00 40.10 O
ATOM 5 O5' A B 104 79.354 143.471 34.579 1.00 40.04 O
ATOM 6 C5' A B 104 79.022 144.684 35.282 1.00 39.31 C
ATOM 7 C4' A B 104 78.963 145.827 34.302 1.00 40.53 C
ATOM 8 O4' A B 104 77.803 145.635 33.447 1.00 39.98 O
ATOM 9 C3' A B 104 78.840 147.240 34.876 1.00 41.83 C
ATOM 10 O3' A B 104 79.492 148.168 34.007 1.00 42.38 O
ATOM 11 C2' A B 104 77.346 147.514 34.737 1.00 43.10 C
ATOM 12 O2' A B 104 77.020 148.889 34.642 1.00 43.62 O
ATOM 13 C1' A B 104 77.066 146.832 33.404 1.00 42.05 C
ATOM 14 N9 A B 104 75.664 146.528 33.152 1.00 42.06 N
ATOM 15 C8 A B 104 74.848 145.634 33.785 1.00 43.74 C
ATOM 16 N7 A B 104 73.629 145.605 33.308 1.00 45.59 N
ATOM 17 C5 A B 104 73.648 146.541 32.289 1.00 43.67 C
ATOM 18 C6 A B 104 72.665 146.978 31.387 1.00 44.28 C
ATOM 19 N6 A B 104 71.424 146.491 31.345 1.00 45.37 N
ATOM 20 N1 A B 104 73.006 147.942 30.510 1.00 44.46 N
ATOM 21 C2 A B 104 74.257 148.415 30.535 1.00 44.50 C
ATOM 22 N3 A B 104 75.271 148.072 31.320 1.00 43.80 N
ATOM 23 C4 A B 104 74.894 147.121 32.187 1.00 43.41 C
ATOM 24 P U B 105 81.088 148.349 34.048 1.00 43.40 P
ATOM 25 OP1 U B 105 81.743 147.160 34.662 1.00 43.07 O
ATOM 26 OP2 U B 105 81.365 149.696 34.589 1.00 42.20 O
ATOM 27 O5' U B 105 81.433 148.368 32.496 1.00 45.61 O
TER
ATOM 2 P G A 102 76.354 150.164 38.011 1.00 31.57 P
ATOM 3 OP1 G A 102 77.379 149.599 38.910 1.00 30.78 O
ATOM 4 OP2 G A 102 76.739 150.581 36.650 1.00 32.50 O
ATOM 5 O5' G A 102 75.194 149.087 37.906 1.00 32.32 O
ATOM 6 C5' G A 102 74.758 148.368 39.064 1.00 34.37 C
ATOM 7 C4' G A 102 73.602 147.478 38.710 1.00 36.05 C
ATOM 8 O4' G A 102 72.543 148.287 38.145 1.00 37.66 O
ATOM 9 C3' G A 102 73.888 146.439 37.643 1.00 35.58 C
ATOM 10 O3' G A 102 74.454 145.289 38.239 1.00 35.37 O
ATOM 11 C2' G A 102 72.496 146.154 37.104 1.00 38.33 C
ATOM 12 O2' G A 102 71.748 145.310 37.962 1.00 37.29 O
ATOM 13 C1' G A 102 71.876 147.553 37.135 1.00 40.21 C
ATOM 14 N9 G A 102 71.988 148.296 35.883 1.00 43.27 N
ATOM 15 C8 G A 102 72.967 149.195 35.536 1.00 44.27 C
ATOM 16 N7 G A 102 72.776 149.733 34.362 1.00 44.93 N
ATOM 17 C5 G A 102 71.607 149.147 33.901 1.00 44.20 C
ATOM 18 C6 G A 102 70.902 149.339 32.688 1.00 44.17 C
ATOM 19 O6 G A 102 71.171 150.098 31.747 1.00 43.48 O
ATOM 20 N1 G A 102 69.773 148.531 32.625 1.00 43.99 N
ATOM 21 C2 G A 102 69.373 147.654 33.604 1.00 43.29 C
ATOM 22 N2 G A 102 68.264 146.950 33.355 1.00 43.59 N
ATOM 23 N3 G A 102 70.014 147.477 34.740 1.00 43.05 N
ATOM 24 C4 G A 102 71.115 148.249 34.822 1.00 43.67 C
ATOM 25 P A A 103 75.885 144.765 37.762 1.00 36.00 P
ATOM 26 OP1 A A 103 76.390 143.898 38.844 1.00 34.99 O
ATOM 27 OP2 A A 103 76.699 145.911 37.309 1.00 35.66 O
ATOM 28 O5' A A 103 75.560 143.853 36.500 1.00 38.14 O
TER
ATOM 1 O3' A B 103 78.150 141.590 35.707 1.00 38.34 O
ATOM 2 P A B 104 79.629 142.099 35.344 1.00 40.91 P
ATOM 3 OP1 A B 104 80.244 141.139 34.377 1.00 36.35 O
ATOM 4 OP2 A B 104 80.336 142.408 36.610 1.00 40.10 O
ATOM 5 O5' A B 104 79.354 143.471 34.579 1.00 40.04 O
ATOM 6 C5' A B 104 79.022 144.684 35.282 1.00 39.31 C
ATOM 7 C4' A B 104 78.963 145.827 34.302 1.00 40.53 C
ATOM 8 O4' A B 104 77.803 145.635 33.447 1.00 39.98 O
ATOM 9 C3' A B 104 78.840 147.240 34.876 1.00 41.83 C
ATOM 10 O3' A B 104 79.492 148.168 34.007 1.00 42.38 O
ATOM 11 C2' A B 104 77.346 147.514 34.737 1.00 43.10 C
ATOM 12 O2' A B 104 77.020 148.889 34.642 1.00 43.62 O
ATOM 13 C1' A B 104 77.066 146.832 33.404 1.00 42.05 C
ATOM 14 N9 A B 104 75.664 146.528 33.152 1.00 42.06 N
ATOM 15 C8 A B 104 74.848 145.634 33.785 1.00 43.74 C
ATOM 16 N7 A B 104 73.629 145.605 33.308 1.00 45.59 N
ATOM 17 C5 A B 104 73.648 146.541 32.289 1.00 43.67 C
ATOM 18 C6 A B 104 72.665 146.978 31.387 1.00 44.28 C
ATOM 19 N6 A B 104 71.424 146.491 31.345 1.00 45.37 N
ATOM 20 N1 A B 104 73.006 147.942 30.510 1.00 44.46 N
ATOM 21 C2 A B 104 74.257 148.415 30.535 1.00 44.50 C
ATOM 22 N3 A B 104 75.271 148.072 31.320 1.00 43.80 N
ATOM 23 C4 A B 104 74.894 147.121 32.187 1.00 43.41 C
ATOM 24 P U B 105 81.088 148.349 34.048 1.00 43.40 P
ATOM 25 OP1 U B 105 81.743 147.160 34.662 1.00 43.07 O
ATOM 26 OP2 U B 105 81.365 149.696 34.589 1.00 42.20 O
ATOM 27 O5' U B 105 81.433 148.368 32.496 1.00 45.61 O
TER
Atoms:
OP1: (77.379,149.599,38.910)
OP2: (76.739,150.581,36.650)
C3': (73.888,146.439,37.643)
C1': (71.876,147.553,37.135)
C5': (74.758,148.368,39.064)
O6: (71.171,150.098,31.747)
O4': (72.543,148.287,38.145)
C8: (72.967,149.195,35.536)
C2: (69.373,147.654,33.604)
C6: (70.902,149.339,32.688)
C5: (71.607,149.147,33.901)
C4: (71.115,148.249,34.822)
P: (76.354,150.164,38.011)
C4': (73.602,147.478,38.710)
C2': (72.496,146.154,37.104)
O2': (71.748,145.310,37.962)
N1: (69.773,148.531,32.625)
N2: (68.264,146.950,33.355)
N3: (70.014,147.477,34.740)
N7: (72.776,149.733,34.362)
N9: (71.988,148.296,35.883)
O5': (75.194,149.087,37.906)
O3': (74.454,145.289,38.239)
OP2: (76.739,150.581,36.650)
C3': (73.888,146.439,37.643)
C1': (71.876,147.553,37.135)
C5': (74.758,148.368,39.064)
O6: (71.171,150.098,31.747)
O4': (72.543,148.287,38.145)
C8: (72.967,149.195,35.536)
C2: (69.373,147.654,33.604)
C6: (70.902,149.339,32.688)
C5: (71.607,149.147,33.901)
C4: (71.115,148.249,34.822)
P: (76.354,150.164,38.011)
C4': (73.602,147.478,38.710)
C2': (72.496,146.154,37.104)
O2': (71.748,145.310,37.962)
N1: (69.773,148.531,32.625)
N2: (68.264,146.950,33.355)
N3: (70.014,147.477,34.740)
N7: (72.776,149.733,34.362)
N9: (71.988,148.296,35.883)
O5': (75.194,149.087,37.906)
O3': (74.454,145.289,38.239)
OP1: (80.244,141.139,34.377)
OP2: (80.336,142.408,36.610)
C3': (78.840,147.240,34.876)
C1': (77.066,146.832,33.404)
C5': (79.022,144.684,35.282)
O4': (77.803,145.635,33.447)
C8: (74.848,145.634,33.785)
O2': (77.020,148.889,34.642)
C6: (72.665,146.978,31.387)
C5: (73.648,146.541,32.289)
C4: (74.894,147.121,32.187)
P: (79.629,142.099,35.344)
C4': (78.963,145.827,34.302)
C2': (77.346,147.514,34.737)
C2: (74.257,148.415,30.535)
N1: (73.006,147.942,30.510)
N3: (75.271,148.072,31.320)
N6: (71.424,146.491,31.345)
N7: (73.629,145.605,33.308)
N9: (75.664,146.528,33.152)
O5': (79.354,143.471,34.579)
O3': (79.492,148.168,34.007)
OP2: (80.336,142.408,36.610)
C3': (78.840,147.240,34.876)
C1': (77.066,146.832,33.404)
C5': (79.022,144.684,35.282)
O4': (77.803,145.635,33.447)
C8: (74.848,145.634,33.785)
O2': (77.020,148.889,34.642)
C6: (72.665,146.978,31.387)
C5: (73.648,146.541,32.289)
C4: (74.894,147.121,32.187)
P: (79.629,142.099,35.344)
C4': (78.963,145.827,34.302)
C2': (77.346,147.514,34.737)
C2: (74.257,148.415,30.535)
N1: (73.006,147.942,30.510)
N3: (75.271,148.072,31.320)
N6: (71.424,146.491,31.345)
N7: (73.629,145.605,33.308)
N9: (75.664,146.528,33.152)
O5': (79.354,143.471,34.579)
O3': (79.492,148.168,34.007)
Image (generated by PyMOL):