Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1077:A1078
Extra
PDB:
ATOM 1 O3' A A1076 36.557 105.423 144.485 1.00 37.06 O
ATOM 2 P A A1077 38.034 105.783 144.997 1.00 38.54 P
ATOM 3 OP1 A A1077 38.521 104.777 145.958 1.00 38.74 O
ATOM 4 OP2 A A1077 38.062 107.222 145.354 1.00 35.84 O
ATOM 5 O5' A A1077 38.922 105.547 143.703 1.00 39.45 O
ATOM 6 C5' A A1077 38.670 106.277 142.503 1.00 41.03 C
ATOM 7 C4' A A1077 39.440 105.689 141.346 1.00 41.83 C
ATOM 8 O4' A A1077 38.909 104.378 140.997 1.00 42.62 O
ATOM 9 C3' A A1077 39.308 106.494 140.064 1.00 41.80 C
ATOM 10 O3' A A1077 40.136 107.638 139.984 1.00 39.92 O
ATOM 11 C2' A A1077 39.451 105.433 138.987 1.00 42.57 C
ATOM 12 O2' A A1077 40.780 105.002 138.783 1.00 43.80 O
ATOM 13 C1' A A1077 38.593 104.340 139.610 1.00 42.91 C
ATOM 14 N9 A A1077 37.181 104.701 139.470 1.00 44.84 N
ATOM 15 C8 A A1077 36.609 105.955 139.409 1.00 46.34 C
ATOM 16 N7 A A1077 35.313 105.947 139.281 1.00 45.65 N
ATOM 17 C5 A A1077 35.004 104.606 139.269 1.00 46.41 C
ATOM 18 C6 A A1077 33.798 103.948 139.178 1.00 48.75 C
ATOM 19 N6 A A1077 32.643 104.580 139.076 1.00 49.23 N
ATOM 20 N1 A A1077 33.815 102.596 139.193 1.00 51.88 N
ATOM 21 C2 A A1077 35.007 101.976 139.286 1.00 51.19 C
ATOM 22 N3 A A1077 36.218 102.496 139.383 1.00 47.87 N
ATOM 23 C4 A A1077 36.145 103.830 139.374 1.00 45.73 C
ATOM 24 P G A1078 39.444 109.073 139.814 1.00 40.26 P
ATOM 25 OP1 G A1078 40.549 110.027 139.602 1.00 42.59 O
ATOM 26 OP2 G A1078 38.444 109.319 140.906 1.00 39.05 O
ATOM 27 O5' G A1078 38.698 108.938 138.422 1.00 39.55 O
TER
ATOM 1 O3' A B1077 40.136 107.638 139.984 1.00 39.92 O
ATOM 2 P G B1078 39.444 109.073 139.814 1.00 40.26 P
ATOM 3 OP1 G B1078 40.549 110.027 139.602 1.00 42.59 O
ATOM 4 OP2 G B1078 38.444 109.319 140.906 1.00 39.05 O
ATOM 5 O5' G B1078 38.698 108.938 138.422 1.00 39.55 O
ATOM 6 C5' G B1078 37.287 109.077 138.303 1.00 41.27 C
ATOM 7 C4' G B1078 36.857 108.544 136.968 1.00 42.34 C
ATOM 8 O4' G B1078 35.416 108.502 136.881 1.00 41.93 O
ATOM 9 C3' G B1078 37.340 109.369 135.783 1.00 42.19 C
ATOM 10 O3' G B1078 37.597 108.486 134.692 1.00 41.29 O
ATOM 11 C2' G B1078 36.136 110.248 135.466 1.00 40.96 C
ATOM 12 O2' G B1078 36.164 110.635 134.099 1.00 41.44 O
ATOM 13 C1' G B1078 34.999 109.271 135.776 1.00 40.91 C
ATOM 14 N9 G B1078 33.650 109.764 136.047 1.00 39.52 N
ATOM 15 C8 G B1078 33.244 111.018 136.424 1.00 39.73 C
ATOM 16 N7 G B1078 31.947 111.125 136.522 1.00 38.14 N
ATOM 17 C5 G B1078 31.475 109.865 136.183 1.00 36.60 C
ATOM 18 C6 G B1078 30.154 109.370 136.059 1.00 36.55 C
ATOM 19 O6 G B1078 29.090 109.980 136.146 1.00 38.49 O
ATOM 20 N1 G B1078 30.142 108.015 135.765 1.00 36.24 N
ATOM 21 C2 G B1078 31.251 107.244 135.573 1.00 36.89 C
ATOM 22 N2 G B1078 31.056 105.951 135.333 1.00 37.11 N
ATOM 23 N3 G B1078 32.474 107.705 135.623 1.00 38.68 N
ATOM 24 C4 G B1078 32.513 109.011 135.932 1.00 37.38 C
ATOM 25 P U B1079 39.106 108.063 134.343 1.00 39.55 P
ATOM 26 OP1 U B1079 40.081 109.017 134.925 1.00 41.62 O
ATOM 27 OP2 U B1079 39.153 107.769 132.901 1.00 39.01 O
ATOM 28 O5' U B1079 39.276 106.682 135.089 1.00 37.85 O
TER
ATOM 2 P A A1077 38.034 105.783 144.997 1.00 38.54 P
ATOM 3 OP1 A A1077 38.521 104.777 145.958 1.00 38.74 O
ATOM 4 OP2 A A1077 38.062 107.222 145.354 1.00 35.84 O
ATOM 5 O5' A A1077 38.922 105.547 143.703 1.00 39.45 O
ATOM 6 C5' A A1077 38.670 106.277 142.503 1.00 41.03 C
ATOM 7 C4' A A1077 39.440 105.689 141.346 1.00 41.83 C
ATOM 8 O4' A A1077 38.909 104.378 140.997 1.00 42.62 O
ATOM 9 C3' A A1077 39.308 106.494 140.064 1.00 41.80 C
ATOM 10 O3' A A1077 40.136 107.638 139.984 1.00 39.92 O
ATOM 11 C2' A A1077 39.451 105.433 138.987 1.00 42.57 C
ATOM 12 O2' A A1077 40.780 105.002 138.783 1.00 43.80 O
ATOM 13 C1' A A1077 38.593 104.340 139.610 1.00 42.91 C
ATOM 14 N9 A A1077 37.181 104.701 139.470 1.00 44.84 N
ATOM 15 C8 A A1077 36.609 105.955 139.409 1.00 46.34 C
ATOM 16 N7 A A1077 35.313 105.947 139.281 1.00 45.65 N
ATOM 17 C5 A A1077 35.004 104.606 139.269 1.00 46.41 C
ATOM 18 C6 A A1077 33.798 103.948 139.178 1.00 48.75 C
ATOM 19 N6 A A1077 32.643 104.580 139.076 1.00 49.23 N
ATOM 20 N1 A A1077 33.815 102.596 139.193 1.00 51.88 N
ATOM 21 C2 A A1077 35.007 101.976 139.286 1.00 51.19 C
ATOM 22 N3 A A1077 36.218 102.496 139.383 1.00 47.87 N
ATOM 23 C4 A A1077 36.145 103.830 139.374 1.00 45.73 C
ATOM 24 P G A1078 39.444 109.073 139.814 1.00 40.26 P
ATOM 25 OP1 G A1078 40.549 110.027 139.602 1.00 42.59 O
ATOM 26 OP2 G A1078 38.444 109.319 140.906 1.00 39.05 O
ATOM 27 O5' G A1078 38.698 108.938 138.422 1.00 39.55 O
TER
ATOM 1 O3' A B1077 40.136 107.638 139.984 1.00 39.92 O
ATOM 2 P G B1078 39.444 109.073 139.814 1.00 40.26 P
ATOM 3 OP1 G B1078 40.549 110.027 139.602 1.00 42.59 O
ATOM 4 OP2 G B1078 38.444 109.319 140.906 1.00 39.05 O
ATOM 5 O5' G B1078 38.698 108.938 138.422 1.00 39.55 O
ATOM 6 C5' G B1078 37.287 109.077 138.303 1.00 41.27 C
ATOM 7 C4' G B1078 36.857 108.544 136.968 1.00 42.34 C
ATOM 8 O4' G B1078 35.416 108.502 136.881 1.00 41.93 O
ATOM 9 C3' G B1078 37.340 109.369 135.783 1.00 42.19 C
ATOM 10 O3' G B1078 37.597 108.486 134.692 1.00 41.29 O
ATOM 11 C2' G B1078 36.136 110.248 135.466 1.00 40.96 C
ATOM 12 O2' G B1078 36.164 110.635 134.099 1.00 41.44 O
ATOM 13 C1' G B1078 34.999 109.271 135.776 1.00 40.91 C
ATOM 14 N9 G B1078 33.650 109.764 136.047 1.00 39.52 N
ATOM 15 C8 G B1078 33.244 111.018 136.424 1.00 39.73 C
ATOM 16 N7 G B1078 31.947 111.125 136.522 1.00 38.14 N
ATOM 17 C5 G B1078 31.475 109.865 136.183 1.00 36.60 C
ATOM 18 C6 G B1078 30.154 109.370 136.059 1.00 36.55 C
ATOM 19 O6 G B1078 29.090 109.980 136.146 1.00 38.49 O
ATOM 20 N1 G B1078 30.142 108.015 135.765 1.00 36.24 N
ATOM 21 C2 G B1078 31.251 107.244 135.573 1.00 36.89 C
ATOM 22 N2 G B1078 31.056 105.951 135.333 1.00 37.11 N
ATOM 23 N3 G B1078 32.474 107.705 135.623 1.00 38.68 N
ATOM 24 C4 G B1078 32.513 109.011 135.932 1.00 37.38 C
ATOM 25 P U B1079 39.106 108.063 134.343 1.00 39.55 P
ATOM 26 OP1 U B1079 40.081 109.017 134.925 1.00 41.62 O
ATOM 27 OP2 U B1079 39.153 107.769 132.901 1.00 39.01 O
ATOM 28 O5' U B1079 39.276 106.682 135.089 1.00 37.85 O
TER
Atoms:
OP1: (38.521,104.777,145.958)
OP2: (38.062,107.222,145.354)
C3': (39.308,106.494,140.064)
C1': (38.593,104.340,139.610)
C5': (38.670,106.277,142.503)
O4': (38.909,104.378,140.997)
C8: (36.609,105.955,139.409)
O2': (40.780,105.002,138.783)
C6: (33.798,103.948,139.178)
C5: (35.004,104.606,139.269)
C4: (36.145,103.830,139.374)
P: (38.034,105.783,144.997)
C4': (39.440,105.689,141.346)
C2': (39.451,105.433,138.987)
C2: (35.007,101.976,139.286)
N1: (33.815,102.596,139.193)
N3: (36.218,102.496,139.383)
N6: (32.643,104.580,139.076)
N7: (35.313,105.947,139.281)
N9: (37.181,104.701,139.470)
O5': (38.922,105.547,143.703)
O3': (40.136,107.638,139.984)
OP2: (38.062,107.222,145.354)
C3': (39.308,106.494,140.064)
C1': (38.593,104.340,139.610)
C5': (38.670,106.277,142.503)
O4': (38.909,104.378,140.997)
C8: (36.609,105.955,139.409)
O2': (40.780,105.002,138.783)
C6: (33.798,103.948,139.178)
C5: (35.004,104.606,139.269)
C4: (36.145,103.830,139.374)
P: (38.034,105.783,144.997)
C4': (39.440,105.689,141.346)
C2': (39.451,105.433,138.987)
C2: (35.007,101.976,139.286)
N1: (33.815,102.596,139.193)
N3: (36.218,102.496,139.383)
N6: (32.643,104.580,139.076)
N7: (35.313,105.947,139.281)
N9: (37.181,104.701,139.470)
O5': (38.922,105.547,143.703)
O3': (40.136,107.638,139.984)
OP1: (40.549,110.027,139.602)
OP2: (38.444,109.319,140.906)
C3': (37.340,109.369,135.783)
C1': (34.999,109.271,135.776)
C5': (37.287,109.077,138.303)
O6: (29.090,109.980,136.146)
O4': (35.416,108.502,136.881)
C8: (33.244,111.018,136.424)
C2: (31.251,107.244,135.573)
C6: (30.154,109.370,136.059)
C5: (31.475,109.865,136.183)
C4: (32.513,109.011,135.932)
P: (39.444,109.073,139.814)
C4': (36.857,108.544,136.968)
C2': (36.136,110.248,135.466)
O2': (36.164,110.635,134.099)
N1: (30.142,108.015,135.765)
N2: (31.056,105.951,135.333)
N3: (32.474,107.705,135.623)
N7: (31.947,111.125,136.522)
N9: (33.650,109.764,136.047)
O5': (38.698,108.938,138.422)
O3': (37.597,108.486,134.692)
OP2: (38.444,109.319,140.906)
C3': (37.340,109.369,135.783)
C1': (34.999,109.271,135.776)
C5': (37.287,109.077,138.303)
O6: (29.090,109.980,136.146)
O4': (35.416,108.502,136.881)
C8: (33.244,111.018,136.424)
C2: (31.251,107.244,135.573)
C6: (30.154,109.370,136.059)
C5: (31.475,109.865,136.183)
C4: (32.513,109.011,135.932)
P: (39.444,109.073,139.814)
C4': (36.857,108.544,136.968)
C2': (36.136,110.248,135.466)
O2': (36.164,110.635,134.099)
N1: (30.142,108.015,135.765)
N2: (31.056,105.951,135.333)
N3: (32.474,107.705,135.623)
N7: (31.947,111.125,136.522)
N9: (33.650,109.764,136.047)
O5': (38.698,108.938,138.422)
O3': (37.597,108.486,134.692)
Image (generated by PyMOL):