ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A860:A861

Extra

PDB:
ATOM 1 O3' G A 859 176.627 91.680 -19.772 1.00 32.41 O
ATOM 2 P G A 860 176.197 90.771 -21.036 1.00 34.14 P
ATOM 3 OP1 G A 860 177.385 90.560 -21.900 1.00 33.63 O
ATOM 4 OP2 G A 860 174.981 91.358 -21.644 1.00 35.61 O
ATOM 5 O5' G A 860 175.785 89.380 -20.384 1.00 32.36 O
ATOM 6 C5' G A 860 176.771 88.503 -19.833 1.00 31.99 C
ATOM 7 C4' G A 860 176.111 87.277 -19.264 1.00 32.29 C
ATOM 8 O4' G A 860 175.184 87.691 -18.237 1.00 33.61 O
ATOM 9 C3' G A 860 175.281 86.479 -20.248 1.00 32.76 C
ATOM 10 O3' G A 860 176.098 85.531 -20.890 1.00 33.97 O
ATOM 11 C2' G A 860 174.255 85.808 -19.349 1.00 33.48 C
ATOM 12 O2' G A 860 174.756 84.619 -18.776 1.00 33.34 O
ATOM 13 C1' G A 860 174.031 86.879 -18.273 1.00 34.46 C
ATOM 14 N9 G A 860 172.892 87.739 -18.585 1.00 35.81 N
ATOM 15 C8 G A 860 172.922 88.936 -19.261 1.00 37.52 C
ATOM 16 N7 G A 860 171.733 89.427 -19.482 1.00 37.59 N
ATOM 17 C5 G A 860 170.870 88.513 -18.898 1.00 36.12 C
ATOM 18 C6 G A 860 169.464 88.502 -18.837 1.00 37.14 C
ATOM 19 O6 G A 860 168.668 89.318 -19.319 1.00 40.27 O
ATOM 20 N1 G A 860 168.992 87.396 -18.137 1.00 35.72 N
ATOM 21 C2 G A 860 169.779 86.428 -17.573 1.00 34.39 C
ATOM 22 N2 G A 860 169.147 85.445 -16.922 1.00 34.60 N
ATOM 23 N3 G A 860 171.092 86.423 -17.637 1.00 35.60 N
ATOM 24 C4 G A 860 171.569 87.484 -18.312 1.00 35.68 C
ATOM 25 P A A 861 175.819 85.124 -22.419 1.00 34.33 P
ATOM 26 OP1 A A 861 174.548 84.348 -22.474 1.00 35.07 O
ATOM 27 OP2 A A 861 177.071 84.547 -22.967 1.00 34.57 O
ATOM 28 O5' A A 861 175.573 86.475 -23.155 1.00 35.47 O
TER

ATOM 1 O3' G B 860 176.098 85.531 -20.890 1.00 33.97 O
ATOM 2 P A B 861 175.819 85.124 -22.419 1.00 34.33 P
ATOM 3 OP1 A B 861 174.548 84.348 -22.474 1.00 35.07 O
ATOM 4 OP2 A B 861 177.071 84.547 -22.967 1.00 34.57 O
ATOM 5 O5' A B 861 175.573 86.475 -23.155 1.00 35.47 O
ATOM 6 C5' A B 861 175.578 86.518 -24.581 1.00 36.26 C
ATOM 7 C4' A B 861 174.490 87.424 -25.065 1.00 37.67 C
ATOM 8 O4' A B 861 173.195 86.852 -24.742 1.00 39.20 O
ATOM 9 C3' A B 861 174.506 88.821 -24.462 1.00 38.33 C
ATOM 10 O3' A B 861 174.063 89.690 -25.450 1.00 39.20 O
ATOM 11 C2' A B 861 173.417 88.756 -23.400 1.00 38.34 C
ATOM 12 O2' A B 861 172.840 90.024 -23.177 1.00 39.58 O
ATOM 13 C1' A B 861 172.415 87.818 -24.070 1.00 38.42 C
ATOM 14 N9 A B 861 171.479 87.140 -23.175 1.00 37.19 N
ATOM 15 C8 A B 861 171.713 86.078 -22.342 1.00 37.71 C
ATOM 16 N7 A B 861 170.665 85.713 -21.647 1.00 37.59 N
ATOM 17 C5 A B 861 169.672 86.592 -22.056 1.00 36.97 C
ATOM 18 C6 A B 861 168.328 86.730 -21.687 1.00 37.24 C
ATOM 19 N6 A B 861 167.725 85.949 -20.786 1.00 38.13 N
ATOM 20 N1 A B 861 167.613 87.708 -22.282 1.00 36.72 N
ATOM 21 C2 A B 861 168.219 88.483 -23.187 1.00 35.19 C
ATOM 22 N3 A B 861 169.472 88.449 -23.617 1.00 35.10 N
ATOM 23 C4 A B 861 170.156 87.469 -23.003 1.00 36.38 C
ATOM 24 P G B 862 175.114 90.564 -26.267 1.00 41.07 P
ATOM 25 OP1 G B 862 176.104 89.609 -26.854 1.00 40.34 O
ATOM 26 OP2 G B 862 175.570 91.664 -25.376 1.00 42.29 O
ATOM 27 O5' G B 862 174.218 91.151 -27.437 1.00 39.82 O
TER

Atoms:
OP1: (177.385,90.560,-21.900)
OP2: (174.981,91.358,-21.644)
C3': (175.281,86.479,-20.248)
C1': (174.031,86.879,-18.273)
C5': (176.771,88.503,-19.833)
O6: (168.668,89.318,-19.319)
O4': (175.184,87.691,-18.237)
C8: (172.922,88.936,-19.261)
C2: (169.779,86.428,-17.573)
C6: (169.464,88.502,-18.837)
C5: (170.870,88.513,-18.898)
C4: (171.569,87.484,-18.312)
P: (176.197,90.771,-21.036)
C4': (176.111,87.277,-19.264)
C2': (174.255,85.808,-19.349)
O2': (174.756,84.619,-18.776)
N1: (168.992,87.396,-18.137)
N2: (169.147,85.445,-16.922)
N3: (171.092,86.423,-17.637)
N7: (171.733,89.427,-19.482)
N9: (172.892,87.739,-18.585)
O5': (175.785,89.380,-20.384)
O3': (176.098,85.531,-20.890)
OP1: (174.548,84.348,-22.474)
OP2: (177.071,84.547,-22.967)
C3': (174.506,88.821,-24.462)
C1': (172.415,87.818,-24.070)
C5': (175.578,86.518,-24.581)
O4': (173.195,86.852,-24.742)
C8: (171.713,86.078,-22.342)
O2': (172.840,90.024,-23.177)
C6: (168.328,86.730,-21.687)
C5: (169.672,86.592,-22.056)
C4: (170.156,87.469,-23.003)
P: (175.819,85.124,-22.419)
C4': (174.490,87.424,-25.065)
C2': (173.417,88.756,-23.400)
C2: (168.219,88.483,-23.187)
N1: (167.613,87.708,-22.282)
N3: (169.472,88.449,-23.617)
N6: (167.725,85.949,-20.786)
N7: (170.665,85.713,-21.647)
N9: (171.479,87.140,-23.175)
O5': (175.573,86.475,-23.155)
O3': (174.063,89.690,-25.450)
Image (generated by PyMOL):
PyMOL image
show in jmol