Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02038:02490
Extra
PDB:
ATOM 1 O3' G A2037 58.703 144.687 109.547 1.00 38.76 O
ATOM 2 P G A2038 59.137 143.604 108.463 1.00 37.06 P
ATOM 3 OP1 G A2038 60.610 143.502 108.521 1.00 37.81 O
ATOM 4 OP2 G A2038 58.479 143.949 107.189 1.00 36.14 O
ATOM 5 O5' G A2038 58.471 142.293 109.058 1.00 34.46 O
ATOM 6 C5' G A2038 58.470 141.063 108.342 1.00 37.46 C
ATOM 7 C4' G A2038 57.342 140.192 108.835 1.00 38.37 C
ATOM 8 O4' G A2038 56.085 140.872 108.574 1.00 40.03 O
ATOM 9 C3' G A2038 57.229 138.836 108.158 1.00 38.10 C
ATOM 10 O3' G A2038 56.587 137.948 109.053 1.00 38.19 O
ATOM 11 C2' G A2038 56.276 139.136 107.012 1.00 40.09 C
ATOM 12 O2' G A2038 55.586 137.999 106.532 1.00 41.71 O
ATOM 13 C1' G A2038 55.305 140.097 107.692 1.00 39.82 C
ATOM 14 N9 G A2038 54.620 140.984 106.757 1.00 40.19 N
ATOM 15 C8 G A2038 55.152 142.030 106.042 1.00 38.00 C
ATOM 16 N7 G A2038 54.284 142.602 105.255 1.00 39.21 N
ATOM 17 C5 G A2038 53.105 141.899 105.473 1.00 40.32 C
ATOM 18 C6 G A2038 51.820 142.052 104.898 1.00 40.37 C
ATOM 19 O6 G A2038 51.451 142.863 104.057 1.00 43.49 O
ATOM 20 N1 G A2038 50.920 141.127 105.398 1.00 39.56 N
ATOM 21 C2 G A2038 51.208 140.170 106.327 1.00 40.55 C
ATOM 22 N2 G A2038 50.203 139.361 106.672 1.00 41.14 N
ATOM 23 N3 G A2038 52.396 140.012 106.876 1.00 41.72 N
ATOM 24 C4 G A2038 53.294 140.906 106.402 1.00 40.97 C
ATOM 25 P G A2039 57.435 136.843 109.838 1.00 39.71 P
ATOM 26 OP1 G A2039 58.014 137.553 111.010 1.00 40.83 O
ATOM 27 OP2 G A2039 58.327 136.126 108.906 1.00 37.83 O
ATOM 28 O5' G A2039 56.330 135.816 110.349 1.00 35.20 O
TER
ATOM 1 O3' U B2489 53.313 146.333 97.996 1.00 44.88 O
ATOM 2 P A B2490 52.432 145.653 99.146 1.00 44.61 P
ATOM 3 OP1 A B2490 51.538 146.701 99.665 1.00 46.73 O
ATOM 4 OP2 A B2490 53.300 144.913 100.080 1.00 45.39 O
ATOM 5 O5' A B2490 51.490 144.654 98.345 1.00 46.14 O
ATOM 6 C5' A B2490 51.680 143.258 98.409 1.00 43.47 C
ATOM 7 C4' A B2490 50.387 142.583 98.753 1.00 44.16 C
ATOM 8 O4' A B2490 50.749 141.315 99.343 1.00 46.08 O
ATOM 9 C3' A B2490 49.547 143.276 99.822 1.00 46.33 C
ATOM 10 O3' A B2490 48.214 142.756 99.822 1.00 45.27 O
ATOM 11 C2' A B2490 50.249 142.829 101.098 1.00 47.97 C
ATOM 12 O2' A B2490 49.411 142.811 102.234 1.00 51.65 O
ATOM 13 C1' A B2490 50.639 141.395 100.749 1.00 47.75 C
ATOM 14 N9 A B2490 51.925 141.039 101.332 1.00 46.34 N
ATOM 15 C8 A B2490 53.140 141.632 101.119 1.00 46.29 C
ATOM 16 N7 A B2490 54.112 141.108 101.819 1.00 47.20 N
ATOM 17 C5 A B2490 53.496 140.097 102.535 1.00 46.43 C
ATOM 18 C6 A B2490 53.983 139.184 103.466 1.00 46.71 C
ATOM 19 N6 A B2490 55.257 139.151 103.866 1.00 46.49 N
ATOM 20 N1 A B2490 53.106 138.298 103.992 1.00 46.51 N
ATOM 21 C2 A B2490 51.823 138.355 103.605 1.00 44.76 C
ATOM 22 N3 A B2490 51.246 139.181 102.745 1.00 44.85 N
ATOM 23 C4 A B2490 52.149 140.036 102.237 1.00 46.11 C
ATOM 24 P U B2491 46.999 143.588 99.170 1.00 45.47 P
ATOM 25 OP1 U B2491 47.541 144.565 98.187 1.00 43.21 O
ATOM 26 OP2 U B2491 46.104 144.058 100.253 1.00 43.71 O
ATOM 27 O5' U B2491 46.216 142.430 98.402 1.00 45.34 O
TER
ATOM 2 P G A2038 59.137 143.604 108.463 1.00 37.06 P
ATOM 3 OP1 G A2038 60.610 143.502 108.521 1.00 37.81 O
ATOM 4 OP2 G A2038 58.479 143.949 107.189 1.00 36.14 O
ATOM 5 O5' G A2038 58.471 142.293 109.058 1.00 34.46 O
ATOM 6 C5' G A2038 58.470 141.063 108.342 1.00 37.46 C
ATOM 7 C4' G A2038 57.342 140.192 108.835 1.00 38.37 C
ATOM 8 O4' G A2038 56.085 140.872 108.574 1.00 40.03 O
ATOM 9 C3' G A2038 57.229 138.836 108.158 1.00 38.10 C
ATOM 10 O3' G A2038 56.587 137.948 109.053 1.00 38.19 O
ATOM 11 C2' G A2038 56.276 139.136 107.012 1.00 40.09 C
ATOM 12 O2' G A2038 55.586 137.999 106.532 1.00 41.71 O
ATOM 13 C1' G A2038 55.305 140.097 107.692 1.00 39.82 C
ATOM 14 N9 G A2038 54.620 140.984 106.757 1.00 40.19 N
ATOM 15 C8 G A2038 55.152 142.030 106.042 1.00 38.00 C
ATOM 16 N7 G A2038 54.284 142.602 105.255 1.00 39.21 N
ATOM 17 C5 G A2038 53.105 141.899 105.473 1.00 40.32 C
ATOM 18 C6 G A2038 51.820 142.052 104.898 1.00 40.37 C
ATOM 19 O6 G A2038 51.451 142.863 104.057 1.00 43.49 O
ATOM 20 N1 G A2038 50.920 141.127 105.398 1.00 39.56 N
ATOM 21 C2 G A2038 51.208 140.170 106.327 1.00 40.55 C
ATOM 22 N2 G A2038 50.203 139.361 106.672 1.00 41.14 N
ATOM 23 N3 G A2038 52.396 140.012 106.876 1.00 41.72 N
ATOM 24 C4 G A2038 53.294 140.906 106.402 1.00 40.97 C
ATOM 25 P G A2039 57.435 136.843 109.838 1.00 39.71 P
ATOM 26 OP1 G A2039 58.014 137.553 111.010 1.00 40.83 O
ATOM 27 OP2 G A2039 58.327 136.126 108.906 1.00 37.83 O
ATOM 28 O5' G A2039 56.330 135.816 110.349 1.00 35.20 O
TER
ATOM 1 O3' U B2489 53.313 146.333 97.996 1.00 44.88 O
ATOM 2 P A B2490 52.432 145.653 99.146 1.00 44.61 P
ATOM 3 OP1 A B2490 51.538 146.701 99.665 1.00 46.73 O
ATOM 4 OP2 A B2490 53.300 144.913 100.080 1.00 45.39 O
ATOM 5 O5' A B2490 51.490 144.654 98.345 1.00 46.14 O
ATOM 6 C5' A B2490 51.680 143.258 98.409 1.00 43.47 C
ATOM 7 C4' A B2490 50.387 142.583 98.753 1.00 44.16 C
ATOM 8 O4' A B2490 50.749 141.315 99.343 1.00 46.08 O
ATOM 9 C3' A B2490 49.547 143.276 99.822 1.00 46.33 C
ATOM 10 O3' A B2490 48.214 142.756 99.822 1.00 45.27 O
ATOM 11 C2' A B2490 50.249 142.829 101.098 1.00 47.97 C
ATOM 12 O2' A B2490 49.411 142.811 102.234 1.00 51.65 O
ATOM 13 C1' A B2490 50.639 141.395 100.749 1.00 47.75 C
ATOM 14 N9 A B2490 51.925 141.039 101.332 1.00 46.34 N
ATOM 15 C8 A B2490 53.140 141.632 101.119 1.00 46.29 C
ATOM 16 N7 A B2490 54.112 141.108 101.819 1.00 47.20 N
ATOM 17 C5 A B2490 53.496 140.097 102.535 1.00 46.43 C
ATOM 18 C6 A B2490 53.983 139.184 103.466 1.00 46.71 C
ATOM 19 N6 A B2490 55.257 139.151 103.866 1.00 46.49 N
ATOM 20 N1 A B2490 53.106 138.298 103.992 1.00 46.51 N
ATOM 21 C2 A B2490 51.823 138.355 103.605 1.00 44.76 C
ATOM 22 N3 A B2490 51.246 139.181 102.745 1.00 44.85 N
ATOM 23 C4 A B2490 52.149 140.036 102.237 1.00 46.11 C
ATOM 24 P U B2491 46.999 143.588 99.170 1.00 45.47 P
ATOM 25 OP1 U B2491 47.541 144.565 98.187 1.00 43.21 O
ATOM 26 OP2 U B2491 46.104 144.058 100.253 1.00 43.71 O
ATOM 27 O5' U B2491 46.216 142.430 98.402 1.00 45.34 O
TER
Atoms:
OP1: (60.610,143.502,108.521)
OP2: (58.479,143.949,107.189)
C3': (57.229,138.836,108.158)
C1': (55.305,140.097,107.692)
C5': (58.470,141.063,108.342)
O6: (51.451,142.863,104.057)
O4': (56.085,140.872,108.574)
C8: (55.152,142.030,106.042)
C2: (51.208,140.170,106.327)
C6: (51.820,142.052,104.898)
C5: (53.105,141.899,105.473)
C4: (53.294,140.906,106.402)
P: (59.137,143.604,108.463)
C4': (57.342,140.192,108.835)
C2': (56.276,139.136,107.012)
O2': (55.586,137.999,106.532)
N1: (50.920,141.127,105.398)
N2: (50.203,139.361,106.672)
N3: (52.396,140.012,106.876)
N7: (54.284,142.602,105.255)
N9: (54.620,140.984,106.757)
O5': (58.471,142.293,109.058)
O3': (56.587,137.948,109.053)
OP2: (58.479,143.949,107.189)
C3': (57.229,138.836,108.158)
C1': (55.305,140.097,107.692)
C5': (58.470,141.063,108.342)
O6: (51.451,142.863,104.057)
O4': (56.085,140.872,108.574)
C8: (55.152,142.030,106.042)
C2: (51.208,140.170,106.327)
C6: (51.820,142.052,104.898)
C5: (53.105,141.899,105.473)
C4: (53.294,140.906,106.402)
P: (59.137,143.604,108.463)
C4': (57.342,140.192,108.835)
C2': (56.276,139.136,107.012)
O2': (55.586,137.999,106.532)
N1: (50.920,141.127,105.398)
N2: (50.203,139.361,106.672)
N3: (52.396,140.012,106.876)
N7: (54.284,142.602,105.255)
N9: (54.620,140.984,106.757)
O5': (58.471,142.293,109.058)
O3': (56.587,137.948,109.053)
OP1: (51.538,146.701,99.665)
OP2: (53.300,144.913,100.080)
C3': (49.547,143.276,99.822)
C1': (50.639,141.395,100.749)
C5': (51.680,143.258,98.409)
O4': (50.749,141.315,99.343)
C8: (53.140,141.632,101.119)
O2': (49.411,142.811,102.234)
C6: (53.983,139.184,103.466)
C5: (53.496,140.097,102.535)
C4: (52.149,140.036,102.237)
P: (52.432,145.653,99.146)
C4': (50.387,142.583,98.753)
C2': (50.249,142.829,101.098)
C2: (51.823,138.355,103.605)
N1: (53.106,138.298,103.992)
N3: (51.246,139.181,102.745)
N6: (55.257,139.151,103.866)
N7: (54.112,141.108,101.819)
N9: (51.925,141.039,101.332)
O5': (51.490,144.654,98.345)
O3': (48.214,142.756,99.822)
OP2: (53.300,144.913,100.080)
C3': (49.547,143.276,99.822)
C1': (50.639,141.395,100.749)
C5': (51.680,143.258,98.409)
O4': (50.749,141.315,99.343)
C8: (53.140,141.632,101.119)
O2': (49.411,142.811,102.234)
C6: (53.983,139.184,103.466)
C5: (53.496,140.097,102.535)
C4: (52.149,140.036,102.237)
P: (52.432,145.653,99.146)
C4': (50.387,142.583,98.753)
C2': (50.249,142.829,101.098)
C2: (51.823,138.355,103.605)
N1: (53.106,138.298,103.992)
N3: (51.246,139.181,102.745)
N6: (55.257,139.151,103.866)
N7: (54.112,141.108,101.819)
N9: (51.925,141.039,101.332)
O5': (51.490,144.654,98.345)
O3': (48.214,142.756,99.822)
Image (generated by PyMOL):