Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:198:197
Extra
PDB:
ATOM 1 O3' A A 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 2 P G A 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G A 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G A 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G A 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G A 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G A 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G A 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G A 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G A 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G A 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G A 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G A 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G A 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G A 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G A 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G A 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G A 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G A 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G A 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G A 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G A 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G A 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G A 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
TER
ATOM 1 O3' A B 96 55.607 -41.513 104.058 1.00 40.66 O
ATOM 2 P A B 97 57.130 -41.930 104.393 1.00 44.77 P
ATOM 3 OP1 A B 97 57.586 -41.031 105.487 1.00 44.91 O
ATOM 4 OP2 A B 97 57.892 -41.939 103.124 1.00 44.54 O
ATOM 5 O5' A B 97 56.937 -43.416 104.923 1.00 45.18 O
ATOM 6 C5' A B 97 55.828 -43.751 105.742 1.00 45.34 C
ATOM 7 C4' A B 97 55.703 -45.238 105.916 1.00 45.69 C
ATOM 8 O4' A B 97 55.118 -45.848 104.724 1.00 45.47 O
ATOM 9 C3' A B 97 57.011 -45.983 106.104 1.00 46.05 C
ATOM 10 O3' A B 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 11 C2' A B 97 56.657 -47.409 105.657 1.00 46.22 C
ATOM 12 O2' A B 97 55.978 -48.120 106.683 1.00 46.58 O
ATOM 13 C1' A B 97 55.667 -47.138 104.521 1.00 45.77 C
ATOM 14 N9 A B 97 56.329 -47.138 103.220 1.00 45.53 N
ATOM 15 C8 A B 97 56.854 -46.039 102.603 1.00 45.19 C
ATOM 16 N7 A B 97 57.401 -46.317 101.449 1.00 45.04 N
ATOM 17 C5 A B 97 57.201 -47.668 101.299 1.00 45.30 C
ATOM 18 C6 A B 97 57.538 -48.523 100.274 1.00 45.32 C
ATOM 19 N6 A B 97 58.153 -48.139 99.173 1.00 45.06 N
ATOM 20 N1 A B 97 57.226 -49.811 100.446 1.00 45.64 N
ATOM 21 C2 A B 97 56.603 -50.172 101.576 1.00 45.92 C
ATOM 22 N3 A B 97 56.200 -49.458 102.615 1.00 45.93 N
ATOM 23 C4 A B 97 56.542 -48.194 102.393 1.00 45.61 C
ATOM 24 P G B 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 25 OP1 G B 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 26 OP2 G B 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 27 O5' G B 98 59.119 -47.722 107.480 1.00 45.84 O
TER
ATOM 2 P G A 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G A 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G A 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G A 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G A 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G A 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G A 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G A 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G A 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G A 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G A 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G A 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G A 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G A 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G A 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G A 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G A 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G A 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G A 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G A 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G A 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G A 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G A 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
TER
ATOM 1 O3' A B 96 55.607 -41.513 104.058 1.00 40.66 O
ATOM 2 P A B 97 57.130 -41.930 104.393 1.00 44.77 P
ATOM 3 OP1 A B 97 57.586 -41.031 105.487 1.00 44.91 O
ATOM 4 OP2 A B 97 57.892 -41.939 103.124 1.00 44.54 O
ATOM 5 O5' A B 97 56.937 -43.416 104.923 1.00 45.18 O
ATOM 6 C5' A B 97 55.828 -43.751 105.742 1.00 45.34 C
ATOM 7 C4' A B 97 55.703 -45.238 105.916 1.00 45.69 C
ATOM 8 O4' A B 97 55.118 -45.848 104.724 1.00 45.47 O
ATOM 9 C3' A B 97 57.011 -45.983 106.104 1.00 46.05 C
ATOM 10 O3' A B 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 11 C2' A B 97 56.657 -47.409 105.657 1.00 46.22 C
ATOM 12 O2' A B 97 55.978 -48.120 106.683 1.00 46.58 O
ATOM 13 C1' A B 97 55.667 -47.138 104.521 1.00 45.77 C
ATOM 14 N9 A B 97 56.329 -47.138 103.220 1.00 45.53 N
ATOM 15 C8 A B 97 56.854 -46.039 102.603 1.00 45.19 C
ATOM 16 N7 A B 97 57.401 -46.317 101.449 1.00 45.04 N
ATOM 17 C5 A B 97 57.201 -47.668 101.299 1.00 45.30 C
ATOM 18 C6 A B 97 57.538 -48.523 100.274 1.00 45.32 C
ATOM 19 N6 A B 97 58.153 -48.139 99.173 1.00 45.06 N
ATOM 20 N1 A B 97 57.226 -49.811 100.446 1.00 45.64 N
ATOM 21 C2 A B 97 56.603 -50.172 101.576 1.00 45.92 C
ATOM 22 N3 A B 97 56.200 -49.458 102.615 1.00 45.93 N
ATOM 23 C4 A B 97 56.542 -48.194 102.393 1.00 45.61 C
ATOM 24 P G B 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 25 OP1 G B 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 26 OP2 G B 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 27 O5' G B 98 59.119 -47.722 107.480 1.00 45.84 O
TER
Atoms:
OP1: (59.170,-45.918,109.238)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
OP1: (57.586,-41.031,105.487)
OP2: (57.892,-41.939,103.124)
C3': (57.011,-45.983,106.104)
C1': (55.667,-47.138,104.521)
C5': (55.828,-43.751,105.742)
O4': (55.118,-45.848,104.724)
C8: (56.854,-46.039,102.603)
O2': (55.978,-48.120,106.683)
C6: (57.538,-48.523,100.274)
C5: (57.201,-47.668,101.299)
C4: (56.542,-48.194,102.393)
P: (57.130,-41.930,104.393)
C4': (55.703,-45.238,105.916)
C2': (56.657,-47.409,105.657)
C2: (56.603,-50.172,101.576)
N1: (57.226,-49.811,100.446)
N3: (56.200,-49.458,102.615)
N6: (58.153,-48.139,99.173)
N7: (57.401,-46.317,101.449)
N9: (56.329,-47.138,103.220)
O5': (56.937,-43.416,104.923)
O3': (57.479,-45.890,107.418)
OP2: (57.892,-41.939,103.124)
C3': (57.011,-45.983,106.104)
C1': (55.667,-47.138,104.521)
C5': (55.828,-43.751,105.742)
O4': (55.118,-45.848,104.724)
C8: (56.854,-46.039,102.603)
O2': (55.978,-48.120,106.683)
C6: (57.538,-48.523,100.274)
C5: (57.201,-47.668,101.299)
C4: (56.542,-48.194,102.393)
P: (57.130,-41.930,104.393)
C4': (55.703,-45.238,105.916)
C2': (56.657,-47.409,105.657)
C2: (56.603,-50.172,101.576)
N1: (57.226,-49.811,100.446)
N3: (56.200,-49.458,102.615)
N6: (58.153,-48.139,99.173)
N7: (57.401,-46.317,101.449)
N9: (56.329,-47.138,103.220)
O5': (56.937,-43.416,104.923)
O3': (57.479,-45.890,107.418)
Image (generated by PyMOL):