Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:046:049
Extra
PDB:
ATOM 1 O3' U A 45 55.217 165.757 36.167 1.00 48.24 O
ATOM 2 P G A 46 54.233 166.728 36.981 1.00 49.69 P
ATOM 3 OP1 G A 46 53.933 167.872 36.089 1.00 50.46 O
ATOM 4 OP2 G A 46 54.781 166.980 38.330 1.00 49.39 O
ATOM 5 O5' G A 46 52.901 165.876 37.116 1.00 50.18 O
ATOM 6 C5' G A 46 52.215 165.435 35.946 1.00 50.65 C
ATOM 7 C4' G A 46 50.729 165.459 36.170 1.00 51.85 C
ATOM 8 O4' G A 46 50.361 164.363 37.048 1.00 53.32 O
ATOM 9 C3' G A 46 50.145 166.721 36.798 1.00 51.95 C
ATOM 10 O3' G A 46 48.877 166.948 36.205 1.00 54.24 O
ATOM 11 C2' G A 46 49.937 166.301 38.253 1.00 51.49 C
ATOM 12 O2' G A 46 48.895 167.004 38.891 1.00 49.80 O
ATOM 13 C1' G A 46 49.522 164.847 38.070 1.00 52.21 C
ATOM 14 N9 G A 46 49.634 163.959 39.224 1.00 54.29 N
ATOM 15 C8 G A 46 50.324 164.172 40.395 1.00 54.14 C
ATOM 16 N7 G A 46 50.222 163.180 41.237 1.00 54.46 N
ATOM 17 C5 G A 46 49.418 162.253 40.583 1.00 55.65 C
ATOM 18 C6 G A 46 48.959 160.977 40.996 1.00 55.17 C
ATOM 19 O6 G A 46 49.166 160.394 42.057 1.00 55.31 O
ATOM 20 N1 G A 46 48.179 160.370 40.020 1.00 55.44 N
ATOM 21 C2 G A 46 47.874 160.914 38.804 1.00 55.29 C
ATOM 22 N2 G A 46 47.118 160.158 37.999 1.00 54.99 N
ATOM 23 N3 G A 46 48.282 162.106 38.406 1.00 56.08 N
ATOM 24 C4 G A 46 49.049 162.717 39.340 1.00 55.87 C
ATOM 25 P C A 47 48.569 168.345 35.482 1.00 55.12 P
ATOM 26 OP1 C A 47 47.190 168.230 34.940 1.00 56.03 O
ATOM 27 OP2 C A 47 49.694 168.668 34.570 1.00 55.00 O
ATOM 28 O5' C A 47 48.539 169.401 36.670 1.00 54.32 O
TER
ATOM 1 O3' C B 48 49.198 170.491 45.451 1.00 63.88 O
ATOM 2 P A B 49 50.511 169.570 45.394 1.00 65.18 P
ATOM 3 OP1 A B 49 51.196 169.760 46.707 1.00 64.23 O
ATOM 4 OP2 A B 49 51.250 169.839 44.124 1.00 61.91 O
ATOM 5 O5' A B 49 49.934 168.086 45.327 1.00 62.45 O
ATOM 6 C5' A B 49 49.352 167.474 46.486 1.00 58.55 C
ATOM 7 C4' A B 49 49.516 165.976 46.425 1.00 56.95 C
ATOM 8 O4' A B 49 48.448 165.388 45.630 1.00 56.93 O
ATOM 9 C3' A B 49 50.828 165.473 45.826 1.00 55.59 C
ATOM 10 O3' A B 49 51.357 164.421 46.618 1.00 54.77 O
ATOM 11 C2' A B 49 50.393 164.928 44.467 1.00 55.61 C
ATOM 12 O2' A B 49 51.214 163.879 44.003 1.00 55.74 O
ATOM 13 C1' A B 49 48.996 164.403 44.786 1.00 55.85 C
ATOM 14 N9 A B 49 48.121 164.230 43.622 1.00 56.49 N
ATOM 15 C8 A B 49 47.957 165.073 42.552 1.00 56.84 C
ATOM 16 N7 A B 49 47.131 164.617 41.640 1.00 56.98 N
ATOM 17 C5 A B 49 46.714 163.396 42.147 1.00 56.68 C
ATOM 18 C6 A B 49 45.841 162.415 41.650 1.00 56.75 C
ATOM 19 N6 A B 49 45.221 162.499 40.471 1.00 56.76 N
ATOM 20 N1 A B 49 45.628 161.322 42.411 1.00 57.12 N
ATOM 21 C2 A B 49 46.263 161.224 43.579 1.00 56.34 C
ATOM 22 N3 A B 49 47.116 162.068 44.147 1.00 56.61 N
ATOM 23 C4 A B 49 47.303 163.149 43.373 1.00 56.90 C
ATOM 24 P A B 50 52.884 164.494 47.121 1.00 53.47 P
ATOM 25 OP1 A B 50 52.988 165.635 48.066 1.00 53.50 O
ATOM 26 OP2 A B 50 53.784 164.432 45.938 1.00 51.42 O
ATOM 27 O5' A B 50 53.063 163.137 47.927 1.00 52.25 O
TER
ATOM 2 P G A 46 54.233 166.728 36.981 1.00 49.69 P
ATOM 3 OP1 G A 46 53.933 167.872 36.089 1.00 50.46 O
ATOM 4 OP2 G A 46 54.781 166.980 38.330 1.00 49.39 O
ATOM 5 O5' G A 46 52.901 165.876 37.116 1.00 50.18 O
ATOM 6 C5' G A 46 52.215 165.435 35.946 1.00 50.65 C
ATOM 7 C4' G A 46 50.729 165.459 36.170 1.00 51.85 C
ATOM 8 O4' G A 46 50.361 164.363 37.048 1.00 53.32 O
ATOM 9 C3' G A 46 50.145 166.721 36.798 1.00 51.95 C
ATOM 10 O3' G A 46 48.877 166.948 36.205 1.00 54.24 O
ATOM 11 C2' G A 46 49.937 166.301 38.253 1.00 51.49 C
ATOM 12 O2' G A 46 48.895 167.004 38.891 1.00 49.80 O
ATOM 13 C1' G A 46 49.522 164.847 38.070 1.00 52.21 C
ATOM 14 N9 G A 46 49.634 163.959 39.224 1.00 54.29 N
ATOM 15 C8 G A 46 50.324 164.172 40.395 1.00 54.14 C
ATOM 16 N7 G A 46 50.222 163.180 41.237 1.00 54.46 N
ATOM 17 C5 G A 46 49.418 162.253 40.583 1.00 55.65 C
ATOM 18 C6 G A 46 48.959 160.977 40.996 1.00 55.17 C
ATOM 19 O6 G A 46 49.166 160.394 42.057 1.00 55.31 O
ATOM 20 N1 G A 46 48.179 160.370 40.020 1.00 55.44 N
ATOM 21 C2 G A 46 47.874 160.914 38.804 1.00 55.29 C
ATOM 22 N2 G A 46 47.118 160.158 37.999 1.00 54.99 N
ATOM 23 N3 G A 46 48.282 162.106 38.406 1.00 56.08 N
ATOM 24 C4 G A 46 49.049 162.717 39.340 1.00 55.87 C
ATOM 25 P C A 47 48.569 168.345 35.482 1.00 55.12 P
ATOM 26 OP1 C A 47 47.190 168.230 34.940 1.00 56.03 O
ATOM 27 OP2 C A 47 49.694 168.668 34.570 1.00 55.00 O
ATOM 28 O5' C A 47 48.539 169.401 36.670 1.00 54.32 O
TER
ATOM 1 O3' C B 48 49.198 170.491 45.451 1.00 63.88 O
ATOM 2 P A B 49 50.511 169.570 45.394 1.00 65.18 P
ATOM 3 OP1 A B 49 51.196 169.760 46.707 1.00 64.23 O
ATOM 4 OP2 A B 49 51.250 169.839 44.124 1.00 61.91 O
ATOM 5 O5' A B 49 49.934 168.086 45.327 1.00 62.45 O
ATOM 6 C5' A B 49 49.352 167.474 46.486 1.00 58.55 C
ATOM 7 C4' A B 49 49.516 165.976 46.425 1.00 56.95 C
ATOM 8 O4' A B 49 48.448 165.388 45.630 1.00 56.93 O
ATOM 9 C3' A B 49 50.828 165.473 45.826 1.00 55.59 C
ATOM 10 O3' A B 49 51.357 164.421 46.618 1.00 54.77 O
ATOM 11 C2' A B 49 50.393 164.928 44.467 1.00 55.61 C
ATOM 12 O2' A B 49 51.214 163.879 44.003 1.00 55.74 O
ATOM 13 C1' A B 49 48.996 164.403 44.786 1.00 55.85 C
ATOM 14 N9 A B 49 48.121 164.230 43.622 1.00 56.49 N
ATOM 15 C8 A B 49 47.957 165.073 42.552 1.00 56.84 C
ATOM 16 N7 A B 49 47.131 164.617 41.640 1.00 56.98 N
ATOM 17 C5 A B 49 46.714 163.396 42.147 1.00 56.68 C
ATOM 18 C6 A B 49 45.841 162.415 41.650 1.00 56.75 C
ATOM 19 N6 A B 49 45.221 162.499 40.471 1.00 56.76 N
ATOM 20 N1 A B 49 45.628 161.322 42.411 1.00 57.12 N
ATOM 21 C2 A B 49 46.263 161.224 43.579 1.00 56.34 C
ATOM 22 N3 A B 49 47.116 162.068 44.147 1.00 56.61 N
ATOM 23 C4 A B 49 47.303 163.149 43.373 1.00 56.90 C
ATOM 24 P A B 50 52.884 164.494 47.121 1.00 53.47 P
ATOM 25 OP1 A B 50 52.988 165.635 48.066 1.00 53.50 O
ATOM 26 OP2 A B 50 53.784 164.432 45.938 1.00 51.42 O
ATOM 27 O5' A B 50 53.063 163.137 47.927 1.00 52.25 O
TER
Atoms:
OP1: (53.933,167.872,36.089)
OP2: (54.781,166.980,38.330)
C3': (50.145,166.721,36.798)
C1': (49.522,164.847,38.070)
C5': (52.215,165.435,35.946)
O6: (49.166,160.394,42.057)
O4': (50.361,164.363,37.048)
C8: (50.324,164.172,40.395)
C2: (47.874,160.914,38.804)
C6: (48.959,160.977,40.996)
C5: (49.418,162.253,40.583)
C4: (49.049,162.717,39.340)
P: (54.233,166.728,36.981)
C4': (50.729,165.459,36.170)
C2': (49.937,166.301,38.253)
O2': (48.895,167.004,38.891)
N1: (48.179,160.370,40.020)
N2: (47.118,160.158,37.999)
N3: (48.282,162.106,38.406)
N7: (50.222,163.180,41.237)
N9: (49.634,163.959,39.224)
O5': (52.901,165.876,37.116)
O3': (48.877,166.948,36.205)
OP2: (54.781,166.980,38.330)
C3': (50.145,166.721,36.798)
C1': (49.522,164.847,38.070)
C5': (52.215,165.435,35.946)
O6: (49.166,160.394,42.057)
O4': (50.361,164.363,37.048)
C8: (50.324,164.172,40.395)
C2: (47.874,160.914,38.804)
C6: (48.959,160.977,40.996)
C5: (49.418,162.253,40.583)
C4: (49.049,162.717,39.340)
P: (54.233,166.728,36.981)
C4': (50.729,165.459,36.170)
C2': (49.937,166.301,38.253)
O2': (48.895,167.004,38.891)
N1: (48.179,160.370,40.020)
N2: (47.118,160.158,37.999)
N3: (48.282,162.106,38.406)
N7: (50.222,163.180,41.237)
N9: (49.634,163.959,39.224)
O5': (52.901,165.876,37.116)
O3': (48.877,166.948,36.205)
OP1: (51.196,169.760,46.707)
OP2: (51.250,169.839,44.124)
C3': (50.828,165.473,45.826)
C1': (48.996,164.403,44.786)
C5': (49.352,167.474,46.486)
O4': (48.448,165.388,45.630)
C8: (47.957,165.073,42.552)
O2': (51.214,163.879,44.003)
C6: (45.841,162.415,41.650)
C5: (46.714,163.396,42.147)
C4: (47.303,163.149,43.373)
P: (50.511,169.570,45.394)
C4': (49.516,165.976,46.425)
C2': (50.393,164.928,44.467)
C2: (46.263,161.224,43.579)
N1: (45.628,161.322,42.411)
N3: (47.116,162.068,44.147)
N6: (45.221,162.499,40.471)
N7: (47.131,164.617,41.640)
N9: (48.121,164.230,43.622)
O5': (49.934,168.086,45.327)
O3': (51.357,164.421,46.618)
OP2: (51.250,169.839,44.124)
C3': (50.828,165.473,45.826)
C1': (48.996,164.403,44.786)
C5': (49.352,167.474,46.486)
O4': (48.448,165.388,45.630)
C8: (47.957,165.073,42.552)
O2': (51.214,163.879,44.003)
C6: (45.841,162.415,41.650)
C5: (46.714,163.396,42.147)
C4: (47.303,163.149,43.373)
P: (50.511,169.570,45.394)
C4': (49.516,165.976,46.425)
C2': (50.393,164.928,44.467)
C2: (46.263,161.224,43.579)
N1: (45.628,161.322,42.411)
N3: (47.116,162.068,44.147)
N6: (45.221,162.499,40.471)
N7: (47.131,164.617,41.640)
N9: (48.121,164.230,43.622)
O5': (49.934,168.086,45.327)
O3': (51.357,164.421,46.618)
Image (generated by PyMOL):