Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01030:01029
Extra
PDB:
ATOM 1 O3' A A1029 40.878 102.540 90.740 1.00 28.94 O
ATOM 2 P G A1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 3 OP1 G A1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 4 OP2 G A1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 5 O5' G A1030 38.734 102.397 89.444 1.00 30.67 O
ATOM 6 C5' G A1030 37.720 102.788 88.505 1.00 28.84 C
ATOM 7 C4' G A1030 36.653 101.723 88.444 1.00 28.96 C
ATOM 8 O4' G A1030 37.162 100.559 87.737 1.00 28.50 O
ATOM 9 C3' G A1030 36.179 101.218 89.800 1.00 27.63 C
ATOM 10 O3' G A1030 34.814 100.897 89.684 1.00 27.03 O
ATOM 11 C2' G A1030 37.024 99.964 90.005 1.00 27.32 C
ATOM 12 O2' G A1030 36.412 99.004 90.833 1.00 27.65 O
ATOM 13 C1' G A1030 37.133 99.428 88.582 1.00 26.71 C
ATOM 14 N9 G A1030 38.358 98.673 88.342 1.00 28.53 N
ATOM 15 C8 G A1030 39.622 99.188 88.191 1.00 29.26 C
ATOM 16 N7 G A1030 40.522 98.273 87.955 1.00 29.98 N
ATOM 17 C5 G A1030 39.813 97.081 87.961 1.00 29.61 C
ATOM 18 C6 G A1030 40.259 95.750 87.765 1.00 30.14 C
ATOM 19 O6 G A1030 41.406 95.344 87.544 1.00 34.05 O
ATOM 20 N1 G A1030 39.212 94.846 87.849 1.00 27.19 N
ATOM 21 C2 G A1030 37.904 95.175 88.087 1.00 28.68 C
ATOM 22 N2 G A1030 37.030 94.149 88.116 1.00 26.70 N
ATOM 23 N3 G A1030 37.476 96.413 88.277 1.00 28.20 N
ATOM 24 C4 G A1030 38.477 97.308 88.201 1.00 28.53 C
ATOM 25 P G A1031 33.725 102.068 89.726 1.00 26.74 P
ATOM 26 OP1 G A1031 32.948 101.943 88.471 1.00 27.63 O
ATOM 27 OP2 G A1031 34.374 103.352 90.055 1.00 26.20 O
ATOM 28 O5' G A1031 32.813 101.664 90.957 1.00 27.07 O
TER
ATOM 1 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 2 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 3 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 4 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 5 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
ATOM 6 C5' A B1029 39.590 101.688 93.543 1.00 28.42 C
ATOM 7 C4' A B1029 40.854 101.347 92.791 1.00 28.68 C
ATOM 8 O4' A B1029 41.321 100.037 93.206 1.00 30.04 O
ATOM 9 C3' A B1029 40.679 101.247 91.285 1.00 27.67 C
ATOM 10 O3' A B1029 40.878 102.540 90.740 1.00 28.94 O
ATOM 11 C2' A B1029 41.767 100.257 90.876 1.00 28.73 C
ATOM 12 O2' A B1029 43.049 100.827 90.739 1.00 29.82 O
ATOM 13 C1' A B1029 41.790 99.310 92.079 1.00 30.35 C
ATOM 14 N9 A B1029 40.939 98.130 91.918 1.00 31.47 N
ATOM 15 C8 A B1029 39.603 98.033 92.210 1.00 33.30 C
ATOM 16 N7 A B1029 39.095 96.855 91.964 1.00 34.12 N
ATOM 17 C5 A B1029 40.166 96.126 91.478 1.00 31.27 C
ATOM 18 C6 A B1029 40.273 94.810 91.029 1.00 32.43 C
ATOM 19 N6 A B1029 39.242 93.961 90.987 1.00 32.83 N
ATOM 20 N1 A B1029 41.483 94.387 90.609 1.00 31.93 N
ATOM 21 C2 A B1029 42.499 95.245 90.633 1.00 30.52 C
ATOM 22 N3 A B1029 42.520 96.510 91.027 1.00 31.39 N
ATOM 23 C4 A B1029 41.307 96.895 91.445 1.00 30.34 C
ATOM 24 P G B1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 25 OP1 G B1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 26 OP2 G B1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 27 O5' G B1030 38.734 102.397 89.444 1.00 30.67 O
TER
ATOM 2 P G A1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 3 OP1 G A1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 4 OP2 G A1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 5 O5' G A1030 38.734 102.397 89.444 1.00 30.67 O
ATOM 6 C5' G A1030 37.720 102.788 88.505 1.00 28.84 C
ATOM 7 C4' G A1030 36.653 101.723 88.444 1.00 28.96 C
ATOM 8 O4' G A1030 37.162 100.559 87.737 1.00 28.50 O
ATOM 9 C3' G A1030 36.179 101.218 89.800 1.00 27.63 C
ATOM 10 O3' G A1030 34.814 100.897 89.684 1.00 27.03 O
ATOM 11 C2' G A1030 37.024 99.964 90.005 1.00 27.32 C
ATOM 12 O2' G A1030 36.412 99.004 90.833 1.00 27.65 O
ATOM 13 C1' G A1030 37.133 99.428 88.582 1.00 26.71 C
ATOM 14 N9 G A1030 38.358 98.673 88.342 1.00 28.53 N
ATOM 15 C8 G A1030 39.622 99.188 88.191 1.00 29.26 C
ATOM 16 N7 G A1030 40.522 98.273 87.955 1.00 29.98 N
ATOM 17 C5 G A1030 39.813 97.081 87.961 1.00 29.61 C
ATOM 18 C6 G A1030 40.259 95.750 87.765 1.00 30.14 C
ATOM 19 O6 G A1030 41.406 95.344 87.544 1.00 34.05 O
ATOM 20 N1 G A1030 39.212 94.846 87.849 1.00 27.19 N
ATOM 21 C2 G A1030 37.904 95.175 88.087 1.00 28.68 C
ATOM 22 N2 G A1030 37.030 94.149 88.116 1.00 26.70 N
ATOM 23 N3 G A1030 37.476 96.413 88.277 1.00 28.20 N
ATOM 24 C4 G A1030 38.477 97.308 88.201 1.00 28.53 C
ATOM 25 P G A1031 33.725 102.068 89.726 1.00 26.74 P
ATOM 26 OP1 G A1031 32.948 101.943 88.471 1.00 27.63 O
ATOM 27 OP2 G A1031 34.374 103.352 90.055 1.00 26.20 O
ATOM 28 O5' G A1031 32.813 101.664 90.957 1.00 27.07 O
TER
ATOM 1 O3' C B1028 37.433 100.305 95.503 1.00 26.22 O
ATOM 2 P A B1029 37.142 100.727 93.986 1.00 27.32 P
ATOM 3 OP1 A B1029 36.649 102.120 94.019 1.00 24.83 O
ATOM 4 OP2 A B1029 36.308 99.670 93.371 1.00 27.12 O
ATOM 5 O5' A B1029 38.578 100.680 93.287 1.00 30.48 O
ATOM 6 C5' A B1029 39.590 101.688 93.543 1.00 28.42 C
ATOM 7 C4' A B1029 40.854 101.347 92.791 1.00 28.68 C
ATOM 8 O4' A B1029 41.321 100.037 93.206 1.00 30.04 O
ATOM 9 C3' A B1029 40.679 101.247 91.285 1.00 27.67 C
ATOM 10 O3' A B1029 40.878 102.540 90.740 1.00 28.94 O
ATOM 11 C2' A B1029 41.767 100.257 90.876 1.00 28.73 C
ATOM 12 O2' A B1029 43.049 100.827 90.739 1.00 29.82 O
ATOM 13 C1' A B1029 41.790 99.310 92.079 1.00 30.35 C
ATOM 14 N9 A B1029 40.939 98.130 91.918 1.00 31.47 N
ATOM 15 C8 A B1029 39.603 98.033 92.210 1.00 33.30 C
ATOM 16 N7 A B1029 39.095 96.855 91.964 1.00 34.12 N
ATOM 17 C5 A B1029 40.166 96.126 91.478 1.00 31.27 C
ATOM 18 C6 A B1029 40.273 94.810 91.029 1.00 32.43 C
ATOM 19 N6 A B1029 39.242 93.961 90.987 1.00 32.83 N
ATOM 20 N1 A B1029 41.483 94.387 90.609 1.00 31.93 N
ATOM 21 C2 A B1029 42.499 95.245 90.633 1.00 30.52 C
ATOM 22 N3 A B1029 42.520 96.510 91.027 1.00 31.39 N
ATOM 23 C4 A B1029 41.307 96.895 91.445 1.00 30.34 C
ATOM 24 P G B1030 40.219 102.942 89.334 1.00 29.01 P
ATOM 25 OP1 G B1030 40.917 102.192 88.258 1.00 27.27 O
ATOM 26 OP2 G B1030 40.168 104.428 89.292 1.00 27.35 O
ATOM 27 O5' G B1030 38.734 102.397 89.444 1.00 30.67 O
TER
Atoms:
OP1: (40.917,102.192,88.258)
OP2: (40.168,104.428,89.292)
C3': (36.179,101.218,89.800)
C1': (37.133,99.428,88.582)
C5': (37.720,102.788,88.505)
O6: (41.406,95.344,87.544)
O4': (37.162,100.559,87.737)
C8: (39.622,99.188,88.191)
C2: (37.904,95.175,88.087)
C6: (40.259,95.750,87.765)
C5: (39.813,97.081,87.961)
C4: (38.477,97.308,88.201)
P: (40.219,102.942,89.334)
C4': (36.653,101.723,88.444)
C2': (37.024,99.964,90.005)
O2': (36.412,99.004,90.833)
N1: (39.212,94.846,87.849)
N2: (37.030,94.149,88.116)
N3: (37.476,96.413,88.277)
N7: (40.522,98.273,87.955)
N9: (38.358,98.673,88.342)
O5': (38.734,102.397,89.444)
O3': (34.814,100.897,89.684)
OP2: (40.168,104.428,89.292)
C3': (36.179,101.218,89.800)
C1': (37.133,99.428,88.582)
C5': (37.720,102.788,88.505)
O6: (41.406,95.344,87.544)
O4': (37.162,100.559,87.737)
C8: (39.622,99.188,88.191)
C2: (37.904,95.175,88.087)
C6: (40.259,95.750,87.765)
C5: (39.813,97.081,87.961)
C4: (38.477,97.308,88.201)
P: (40.219,102.942,89.334)
C4': (36.653,101.723,88.444)
C2': (37.024,99.964,90.005)
O2': (36.412,99.004,90.833)
N1: (39.212,94.846,87.849)
N2: (37.030,94.149,88.116)
N3: (37.476,96.413,88.277)
N7: (40.522,98.273,87.955)
N9: (38.358,98.673,88.342)
O5': (38.734,102.397,89.444)
O3': (34.814,100.897,89.684)
OP1: (36.649,102.120,94.019)
OP2: (36.308,99.670,93.371)
C3': (40.679,101.247,91.285)
C1': (41.790,99.310,92.079)
C5': (39.590,101.688,93.543)
O4': (41.321,100.037,93.206)
C8: (39.603,98.033,92.210)
O2': (43.049,100.827,90.739)
C6: (40.273,94.810,91.029)
C5: (40.166,96.126,91.478)
C4: (41.307,96.895,91.445)
P: (37.142,100.727,93.986)
C4': (40.854,101.347,92.791)
C2': (41.767,100.257,90.876)
C2: (42.499,95.245,90.633)
N1: (41.483,94.387,90.609)
N3: (42.520,96.510,91.027)
N6: (39.242,93.961,90.987)
N7: (39.095,96.855,91.964)
N9: (40.939,98.130,91.918)
O5': (38.578,100.680,93.287)
O3': (40.878,102.540,90.740)
OP2: (36.308,99.670,93.371)
C3': (40.679,101.247,91.285)
C1': (41.790,99.310,92.079)
C5': (39.590,101.688,93.543)
O4': (41.321,100.037,93.206)
C8: (39.603,98.033,92.210)
O2': (43.049,100.827,90.739)
C6: (40.273,94.810,91.029)
C5: (40.166,96.126,91.478)
C4: (41.307,96.895,91.445)
P: (37.142,100.727,93.986)
C4': (40.854,101.347,92.791)
C2': (41.767,100.257,90.876)
C2: (42.499,95.245,90.633)
N1: (41.483,94.387,90.609)
N3: (42.520,96.510,91.027)
N6: (39.242,93.961,90.987)
N7: (39.095,96.855,91.964)
N9: (40.939,98.130,91.918)
O5': (38.578,100.680,93.287)
O3': (40.878,102.540,90.740)
Image (generated by PyMOL):