Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B47:B48
Extra
PDB:
ATOM 1 O3' U A 46 -3.910 36.202 -19.854 1.00 29.11 O
ATOM 2 P G A 47 -2.704 35.485 -19.084 1.00 27.75 P
ATOM 3 OP1 G A 47 -2.376 34.258 -19.838 1.00 31.05 O
ATOM 4 OP2 G A 47 -3.042 35.398 -17.649 1.00 24.27 O
ATOM 5 O5' G A 47 -1.483 36.503 -19.271 1.00 23.28 O
ATOM 6 C5' G A 47 -0.858 36.609 -20.545 1.00 28.18 C
ATOM 7 C4' G A 47 0.101 37.782 -20.586 1.00 27.17 C
ATOM 8 O4' G A 47 -0.639 38.991 -20.291 1.00 28.33 O
ATOM 9 C3' G A 47 1.226 37.765 -19.561 1.00 23.87 C
ATOM 10 O3' G A 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 11 C2' G A 47 1.555 39.250 -19.453 1.00 27.37 C
ATOM 12 O2' G A 47 2.341 39.701 -20.537 1.00 27.29 O
ATOM 13 C1' G A 47 0.174 39.882 -19.550 1.00 26.93 C
ATOM 14 N9 G A 47 -0.475 40.116 -18.267 1.00 24.14 N
ATOM 15 C8 G A 47 -1.274 39.241 -17.573 1.00 26.40 C
ATOM 16 N7 G A 47 -1.728 39.732 -16.453 1.00 24.48 N
ATOM 17 C5 G A 47 -1.195 41.011 -16.411 1.00 24.87 C
ATOM 18 C6 G A 47 -1.342 42.013 -15.432 1.00 26.67 C
ATOM 19 O6 G A 47 -1.999 41.932 -14.394 1.00 22.36 O
ATOM 20 N1 G A 47 -0.644 43.177 -15.750 1.00 23.55 N
ATOM 21 C2 G A 47 0.107 43.337 -16.892 1.00 27.47 C
ATOM 22 N2 G A 47 0.716 44.522 -17.046 1.00 23.61 N
ATOM 23 N3 G A 47 0.254 42.399 -17.821 1.00 20.62 N
ATOM 24 C4 G A 47 -0.425 41.269 -17.516 1.00 25.27 C
ATOM 25 P A A 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 26 OP1 A A 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 27 OP2 A A 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 28 O5' A A 48 2.111 35.234 -18.332 1.00 26.53 O
TER
ATOM 1 O3' G B 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 2 P A B 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 3 OP1 A B 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 4 OP2 A B 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 5 O5' A B 48 2.111 35.234 -18.332 1.00 26.53 O
ATOM 6 C5' A B 48 2.271 33.932 -17.767 1.00 29.88 C
ATOM 7 C4' A B 48 1.603 33.826 -16.409 1.00 27.49 C
ATOM 8 O4' A B 48 2.078 34.909 -15.566 1.00 26.32 O
ATOM 9 C3' A B 48 0.086 33.959 -16.422 1.00 25.61 C
ATOM 10 O3' A B 48 -0.477 33.263 -15.320 1.00 25.46 O
ATOM 11 C2' A B 48 -0.094 35.465 -16.250 1.00 25.21 C
ATOM 12 O2' A B 48 -1.338 35.792 -15.667 1.00 24.03 O
ATOM 13 C1' A B 48 1.015 35.788 -15.256 1.00 26.14 C
ATOM 14 N9 A B 48 1.501 37.164 -15.352 1.00 24.34 N
ATOM 15 C8 A B 48 2.463 37.634 -16.203 1.00 26.74 C
ATOM 16 N7 A B 48 2.705 38.918 -16.081 1.00 26.26 N
ATOM 17 C5 A B 48 1.840 39.322 -15.079 1.00 25.00 C
ATOM 18 C6 A B 48 1.612 40.577 -14.482 1.00 27.31 C
ATOM 19 N6 A B 48 2.269 41.692 -14.836 1.00 23.36 N
ATOM 20 N1 A B 48 0.678 40.639 -13.507 1.00 28.44 N
ATOM 21 C2 A B 48 0.025 39.522 -13.161 1.00 28.11 C
ATOM 22 N3 A B 48 0.157 38.289 -13.653 1.00 22.70 N
ATOM 23 C4 A B 48 1.089 38.255 -14.618 1.00 23.80 C
ATOM 24 P A B 49 -0.610 31.663 -15.299 1.00 24.63 P
ATOM 25 OP1 A B 49 -0.385 31.140 -16.665 1.00 25.60 O
ATOM 26 OP2 A B 49 -1.859 31.358 -14.577 1.00 26.24 O
ATOM 27 O5' A B 49 0.634 31.224 -14.398 1.00 23.73 O
TER
ATOM 2 P G A 47 -2.704 35.485 -19.084 1.00 27.75 P
ATOM 3 OP1 G A 47 -2.376 34.258 -19.838 1.00 31.05 O
ATOM 4 OP2 G A 47 -3.042 35.398 -17.649 1.00 24.27 O
ATOM 5 O5' G A 47 -1.483 36.503 -19.271 1.00 23.28 O
ATOM 6 C5' G A 47 -0.858 36.609 -20.545 1.00 28.18 C
ATOM 7 C4' G A 47 0.101 37.782 -20.586 1.00 27.17 C
ATOM 8 O4' G A 47 -0.639 38.991 -20.291 1.00 28.33 O
ATOM 9 C3' G A 47 1.226 37.765 -19.561 1.00 23.87 C
ATOM 10 O3' G A 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 11 C2' G A 47 1.555 39.250 -19.453 1.00 27.37 C
ATOM 12 O2' G A 47 2.341 39.701 -20.537 1.00 27.29 O
ATOM 13 C1' G A 47 0.174 39.882 -19.550 1.00 26.93 C
ATOM 14 N9 G A 47 -0.475 40.116 -18.267 1.00 24.14 N
ATOM 15 C8 G A 47 -1.274 39.241 -17.573 1.00 26.40 C
ATOM 16 N7 G A 47 -1.728 39.732 -16.453 1.00 24.48 N
ATOM 17 C5 G A 47 -1.195 41.011 -16.411 1.00 24.87 C
ATOM 18 C6 G A 47 -1.342 42.013 -15.432 1.00 26.67 C
ATOM 19 O6 G A 47 -1.999 41.932 -14.394 1.00 22.36 O
ATOM 20 N1 G A 47 -0.644 43.177 -15.750 1.00 23.55 N
ATOM 21 C2 G A 47 0.107 43.337 -16.892 1.00 27.47 C
ATOM 22 N2 G A 47 0.716 44.522 -17.046 1.00 23.61 N
ATOM 23 N3 G A 47 0.254 42.399 -17.821 1.00 20.62 N
ATOM 24 C4 G A 47 -0.425 41.269 -17.516 1.00 25.27 C
ATOM 25 P A A 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 26 OP1 A A 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 27 OP2 A A 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 28 O5' A A 48 2.111 35.234 -18.332 1.00 26.53 O
TER
ATOM 1 O3' G B 47 2.353 37.057 -20.057 1.00 27.33 O
ATOM 2 P A B 48 2.507 35.477 -19.860 1.00 32.64 P
ATOM 3 OP1 A B 48 3.943 35.154 -20.001 1.00 35.45 O
ATOM 4 OP2 A B 48 1.519 34.807 -20.735 1.00 31.08 O
ATOM 5 O5' A B 48 2.111 35.234 -18.332 1.00 26.53 O
ATOM 6 C5' A B 48 2.271 33.932 -17.767 1.00 29.88 C
ATOM 7 C4' A B 48 1.603 33.826 -16.409 1.00 27.49 C
ATOM 8 O4' A B 48 2.078 34.909 -15.566 1.00 26.32 O
ATOM 9 C3' A B 48 0.086 33.959 -16.422 1.00 25.61 C
ATOM 10 O3' A B 48 -0.477 33.263 -15.320 1.00 25.46 O
ATOM 11 C2' A B 48 -0.094 35.465 -16.250 1.00 25.21 C
ATOM 12 O2' A B 48 -1.338 35.792 -15.667 1.00 24.03 O
ATOM 13 C1' A B 48 1.015 35.788 -15.256 1.00 26.14 C
ATOM 14 N9 A B 48 1.501 37.164 -15.352 1.00 24.34 N
ATOM 15 C8 A B 48 2.463 37.634 -16.203 1.00 26.74 C
ATOM 16 N7 A B 48 2.705 38.918 -16.081 1.00 26.26 N
ATOM 17 C5 A B 48 1.840 39.322 -15.079 1.00 25.00 C
ATOM 18 C6 A B 48 1.612 40.577 -14.482 1.00 27.31 C
ATOM 19 N6 A B 48 2.269 41.692 -14.836 1.00 23.36 N
ATOM 20 N1 A B 48 0.678 40.639 -13.507 1.00 28.44 N
ATOM 21 C2 A B 48 0.025 39.522 -13.161 1.00 28.11 C
ATOM 22 N3 A B 48 0.157 38.289 -13.653 1.00 22.70 N
ATOM 23 C4 A B 48 1.089 38.255 -14.618 1.00 23.80 C
ATOM 24 P A B 49 -0.610 31.663 -15.299 1.00 24.63 P
ATOM 25 OP1 A B 49 -0.385 31.140 -16.665 1.00 25.60 O
ATOM 26 OP2 A B 49 -1.859 31.358 -14.577 1.00 26.24 O
ATOM 27 O5' A B 49 0.634 31.224 -14.398 1.00 23.73 O
TER
Atoms:
OP1: (-2.376,34.258,-19.838)
OP2: (-3.042,35.398,-17.649)
C3': (1.226,37.765,-19.561)
C1': (0.174,39.882,-19.550)
C5': (-0.858,36.609,-20.545)
O6: (-1.999,41.932,-14.394)
O4': (-0.639,38.991,-20.291)
C8: (-1.274,39.241,-17.573)
C2: (0.107,43.337,-16.892)
C6: (-1.342,42.013,-15.432)
C5: (-1.195,41.011,-16.411)
C4: (-0.425,41.269,-17.516)
P: (-2.704,35.485,-19.084)
C4': (0.101,37.782,-20.586)
C2': (1.555,39.250,-19.453)
O2': (2.341,39.701,-20.537)
N1: (-0.644,43.177,-15.750)
N2: (0.716,44.522,-17.046)
N3: (0.254,42.399,-17.821)
N7: (-1.728,39.732,-16.453)
N9: (-0.475,40.116,-18.267)
O5': (-1.483,36.503,-19.271)
O3': (2.353,37.057,-20.057)
OP2: (-3.042,35.398,-17.649)
C3': (1.226,37.765,-19.561)
C1': (0.174,39.882,-19.550)
C5': (-0.858,36.609,-20.545)
O6: (-1.999,41.932,-14.394)
O4': (-0.639,38.991,-20.291)
C8: (-1.274,39.241,-17.573)
C2: (0.107,43.337,-16.892)
C6: (-1.342,42.013,-15.432)
C5: (-1.195,41.011,-16.411)
C4: (-0.425,41.269,-17.516)
P: (-2.704,35.485,-19.084)
C4': (0.101,37.782,-20.586)
C2': (1.555,39.250,-19.453)
O2': (2.341,39.701,-20.537)
N1: (-0.644,43.177,-15.750)
N2: (0.716,44.522,-17.046)
N3: (0.254,42.399,-17.821)
N7: (-1.728,39.732,-16.453)
N9: (-0.475,40.116,-18.267)
O5': (-1.483,36.503,-19.271)
O3': (2.353,37.057,-20.057)
OP1: (3.943,35.154,-20.001)
OP2: (1.519,34.807,-20.735)
C3': (0.086,33.959,-16.422)
C1': (1.015,35.788,-15.256)
C5': (2.271,33.932,-17.767)
O4': (2.078,34.909,-15.566)
C8: (2.463,37.634,-16.203)
O2': (-1.338,35.792,-15.667)
C6: (1.612,40.577,-14.482)
C5: (1.840,39.322,-15.079)
C4: (1.089,38.255,-14.618)
P: (2.507,35.477,-19.860)
C4': (1.603,33.826,-16.409)
C2': (-0.094,35.465,-16.250)
C2: (0.025,39.522,-13.161)
N1: (0.678,40.639,-13.507)
N3: (0.157,38.289,-13.653)
N6: (2.269,41.692,-14.836)
N7: (2.705,38.918,-16.081)
N9: (1.501,37.164,-15.352)
O5': (2.111,35.234,-18.332)
O3': (-0.477,33.263,-15.320)
OP2: (1.519,34.807,-20.735)
C3': (0.086,33.959,-16.422)
C1': (1.015,35.788,-15.256)
C5': (2.271,33.932,-17.767)
O4': (2.078,34.909,-15.566)
C8: (2.463,37.634,-16.203)
O2': (-1.338,35.792,-15.667)
C6: (1.612,40.577,-14.482)
C5: (1.840,39.322,-15.079)
C4: (1.089,38.255,-14.618)
P: (2.507,35.477,-19.860)
C4': (1.603,33.826,-16.409)
C2': (-0.094,35.465,-16.250)
C2: (0.025,39.522,-13.161)
N1: (0.678,40.639,-13.507)
N3: (0.157,38.289,-13.653)
N6: (2.269,41.692,-14.836)
N7: (2.705,38.918,-16.081)
N9: (1.501,37.164,-15.352)
O5': (2.111,35.234,-18.332)
O3': (-0.477,33.263,-15.320)
Image (generated by PyMOL):