Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1276:A1254
Extra
PDB:
ATOM 1 O3' C A1275 -113.490 103.898 32.993 1.00 53.97 O
ATOM 2 P G A1276 -113.134 102.332 32.986 1.00 78.85 P
ATOM 3 OP1 G A1276 -112.683 101.995 31.613 1.00 78.85 O
ATOM 4 OP2 G A1276 -114.314 101.613 33.555 1.00 78.85 O
ATOM 5 O5' G A1276 -111.907 102.239 33.996 1.00 78.85 O
ATOM 6 C5' G A1276 -112.105 101.835 35.347 1.00 78.85 C
ATOM 7 C4' G A1276 -110.859 101.226 35.941 1.00 78.85 C
ATOM 8 O4' G A1276 -111.195 100.633 37.224 1.00 78.85 O
ATOM 9 C3' G A1276 -110.211 100.121 35.109 1.00 78.85 C
ATOM 10 O3' G A1276 -108.788 100.207 35.205 1.00 78.85 O
ATOM 11 C2' G A1276 -110.706 98.839 35.780 1.00 78.85 C
ATOM 12 O2' G A1276 -109.844 97.728 35.636 1.00 78.85 O
ATOM 13 C1' G A1276 -110.837 99.266 37.241 1.00 78.85 C
ATOM 14 N9 G A1276 -111.869 98.527 37.993 1.00 78.95 N
ATOM 15 C8 G A1276 -111.749 97.969 39.251 1.00 78.95 C
ATOM 16 N7 G A1276 -112.832 97.371 39.680 1.00 78.95 N
ATOM 17 C5 G A1276 -113.740 97.536 38.643 1.00 78.95 C
ATOM 18 C6 G A1276 -115.095 97.103 38.519 1.00 78.95 C
ATOM 19 O6 G A1276 -115.781 96.465 39.330 1.00 78.95 O
ATOM 20 N1 G A1276 -115.651 97.487 37.296 1.00 78.95 N
ATOM 21 C2 G A1276 -114.993 98.200 36.314 1.00 78.95 C
ATOM 22 N2 G A1276 -115.685 98.485 35.196 1.00 78.95 N
ATOM 23 N3 G A1276 -113.736 98.610 36.424 1.00 78.95 N
ATOM 24 C4 G A1276 -113.165 98.249 37.599 1.00 78.95 C
ATOM 25 P G A1277 -107.909 100.633 33.923 1.00 64.15 P
ATOM 26 OP1 G A1277 -108.501 99.961 32.742 1.00 64.15 O
ATOM 27 OP2 G A1277 -106.490 100.358 34.256 1.00 64.15 O
ATOM 28 O5' G A1277 -108.152 102.207 33.832 1.00 64.15 O
TER
ATOM 1 O3' G B1253 -109.641 100.995 44.353 1.00 68.68 O
ATOM 2 P A B1254 -109.521 99.578 43.583 1.00 88.55 P
ATOM 3 OP1 A B1254 -108.573 98.736 44.355 1.00 88.55 O
ATOM 4 OP2 A B1254 -109.209 99.876 42.161 1.00 88.55 O
ATOM 5 O5' A B1254 -111.001 98.980 43.694 1.00 88.55 O
ATOM 6 C5' A B1254 -111.664 98.842 44.955 1.00 88.55 C
ATOM 7 C4' A B1254 -113.129 98.464 44.790 1.00 88.55 C
ATOM 8 O4' A B1254 -113.754 99.378 43.847 1.00 88.55 O
ATOM 9 C3' A B1254 -113.386 97.061 44.236 1.00 88.55 C
ATOM 10 O3' A B1254 -114.632 96.565 44.733 1.00 88.55 O
ATOM 11 C2' A B1254 -113.501 97.317 42.739 1.00 88.55 C
ATOM 12 O2' A B1254 -114.206 96.326 42.020 1.00 88.55 O
ATOM 13 C1' A B1254 -114.226 98.659 42.718 1.00 88.55 C
ATOM 14 N9 A B1254 -113.952 99.455 41.521 1.00 88.43 N
ATOM 15 C8 A B1254 -112.762 100.054 41.186 1.00 88.43 C
ATOM 16 N7 A B1254 -112.801 100.706 40.049 1.00 88.43 N
ATOM 17 C5 A B1254 -114.103 100.519 39.601 1.00 88.43 C
ATOM 18 C6 A B1254 -114.770 100.963 38.444 1.00 88.43 C
ATOM 19 N6 A B1254 -114.200 101.713 37.493 1.00 88.43 N
ATOM 20 N1 A B1254 -116.063 100.593 38.309 1.00 88.43 N
ATOM 21 C2 A B1254 -116.635 99.836 39.263 1.00 88.43 C
ATOM 22 N3 A B1254 -116.111 99.361 40.389 1.00 88.43 N
ATOM 23 C4 A B1254 -114.825 99.744 40.500 1.00 88.43 C
ATOM 24 P A B1255 -114.818 94.996 45.073 1.00 93.17 P
ATOM 25 OP1 A B1255 -113.478 94.363 45.018 1.00 93.17 O
ATOM 26 OP2 A B1255 -115.887 94.477 44.179 1.00 93.17 O
ATOM 27 O5' A B1255 -115.335 95.034 46.579 1.00 93.17 O
TER
ATOM 2 P G A1276 -113.134 102.332 32.986 1.00 78.85 P
ATOM 3 OP1 G A1276 -112.683 101.995 31.613 1.00 78.85 O
ATOM 4 OP2 G A1276 -114.314 101.613 33.555 1.00 78.85 O
ATOM 5 O5' G A1276 -111.907 102.239 33.996 1.00 78.85 O
ATOM 6 C5' G A1276 -112.105 101.835 35.347 1.00 78.85 C
ATOM 7 C4' G A1276 -110.859 101.226 35.941 1.00 78.85 C
ATOM 8 O4' G A1276 -111.195 100.633 37.224 1.00 78.85 O
ATOM 9 C3' G A1276 -110.211 100.121 35.109 1.00 78.85 C
ATOM 10 O3' G A1276 -108.788 100.207 35.205 1.00 78.85 O
ATOM 11 C2' G A1276 -110.706 98.839 35.780 1.00 78.85 C
ATOM 12 O2' G A1276 -109.844 97.728 35.636 1.00 78.85 O
ATOM 13 C1' G A1276 -110.837 99.266 37.241 1.00 78.85 C
ATOM 14 N9 G A1276 -111.869 98.527 37.993 1.00 78.95 N
ATOM 15 C8 G A1276 -111.749 97.969 39.251 1.00 78.95 C
ATOM 16 N7 G A1276 -112.832 97.371 39.680 1.00 78.95 N
ATOM 17 C5 G A1276 -113.740 97.536 38.643 1.00 78.95 C
ATOM 18 C6 G A1276 -115.095 97.103 38.519 1.00 78.95 C
ATOM 19 O6 G A1276 -115.781 96.465 39.330 1.00 78.95 O
ATOM 20 N1 G A1276 -115.651 97.487 37.296 1.00 78.95 N
ATOM 21 C2 G A1276 -114.993 98.200 36.314 1.00 78.95 C
ATOM 22 N2 G A1276 -115.685 98.485 35.196 1.00 78.95 N
ATOM 23 N3 G A1276 -113.736 98.610 36.424 1.00 78.95 N
ATOM 24 C4 G A1276 -113.165 98.249 37.599 1.00 78.95 C
ATOM 25 P G A1277 -107.909 100.633 33.923 1.00 64.15 P
ATOM 26 OP1 G A1277 -108.501 99.961 32.742 1.00 64.15 O
ATOM 27 OP2 G A1277 -106.490 100.358 34.256 1.00 64.15 O
ATOM 28 O5' G A1277 -108.152 102.207 33.832 1.00 64.15 O
TER
ATOM 1 O3' G B1253 -109.641 100.995 44.353 1.00 68.68 O
ATOM 2 P A B1254 -109.521 99.578 43.583 1.00 88.55 P
ATOM 3 OP1 A B1254 -108.573 98.736 44.355 1.00 88.55 O
ATOM 4 OP2 A B1254 -109.209 99.876 42.161 1.00 88.55 O
ATOM 5 O5' A B1254 -111.001 98.980 43.694 1.00 88.55 O
ATOM 6 C5' A B1254 -111.664 98.842 44.955 1.00 88.55 C
ATOM 7 C4' A B1254 -113.129 98.464 44.790 1.00 88.55 C
ATOM 8 O4' A B1254 -113.754 99.378 43.847 1.00 88.55 O
ATOM 9 C3' A B1254 -113.386 97.061 44.236 1.00 88.55 C
ATOM 10 O3' A B1254 -114.632 96.565 44.733 1.00 88.55 O
ATOM 11 C2' A B1254 -113.501 97.317 42.739 1.00 88.55 C
ATOM 12 O2' A B1254 -114.206 96.326 42.020 1.00 88.55 O
ATOM 13 C1' A B1254 -114.226 98.659 42.718 1.00 88.55 C
ATOM 14 N9 A B1254 -113.952 99.455 41.521 1.00 88.43 N
ATOM 15 C8 A B1254 -112.762 100.054 41.186 1.00 88.43 C
ATOM 16 N7 A B1254 -112.801 100.706 40.049 1.00 88.43 N
ATOM 17 C5 A B1254 -114.103 100.519 39.601 1.00 88.43 C
ATOM 18 C6 A B1254 -114.770 100.963 38.444 1.00 88.43 C
ATOM 19 N6 A B1254 -114.200 101.713 37.493 1.00 88.43 N
ATOM 20 N1 A B1254 -116.063 100.593 38.309 1.00 88.43 N
ATOM 21 C2 A B1254 -116.635 99.836 39.263 1.00 88.43 C
ATOM 22 N3 A B1254 -116.111 99.361 40.389 1.00 88.43 N
ATOM 23 C4 A B1254 -114.825 99.744 40.500 1.00 88.43 C
ATOM 24 P A B1255 -114.818 94.996 45.073 1.00 93.17 P
ATOM 25 OP1 A B1255 -113.478 94.363 45.018 1.00 93.17 O
ATOM 26 OP2 A B1255 -115.887 94.477 44.179 1.00 93.17 O
ATOM 27 O5' A B1255 -115.335 95.034 46.579 1.00 93.17 O
TER
Atoms:
OP1: (-112.683,101.995,31.613)
OP2: (-114.314,101.613,33.555)
C3': (-110.211,100.121,35.109)
C1': (-110.837,99.266,37.241)
C5': (-112.105,101.835,35.347)
O6: (-115.781,96.465,39.330)
O4': (-111.195,100.633,37.224)
C8: (-111.749,97.969,39.251)
C2: (-114.993,98.200,36.314)
C6: (-115.095,97.103,38.519)
C5: (-113.740,97.536,38.643)
C4: (-113.165,98.249,37.599)
P: (-113.134,102.332,32.986)
C4': (-110.859,101.226,35.941)
C2': (-110.706,98.839,35.780)
O2': (-109.844,97.728,35.636)
N1: (-115.651,97.487,37.296)
N2: (-115.685,98.485,35.196)
N3: (-113.736,98.610,36.424)
N7: (-112.832,97.371,39.680)
N9: (-111.869,98.527,37.993)
O5': (-111.907,102.239,33.996)
O3': (-108.788,100.207,35.205)
OP2: (-114.314,101.613,33.555)
C3': (-110.211,100.121,35.109)
C1': (-110.837,99.266,37.241)
C5': (-112.105,101.835,35.347)
O6: (-115.781,96.465,39.330)
O4': (-111.195,100.633,37.224)
C8: (-111.749,97.969,39.251)
C2: (-114.993,98.200,36.314)
C6: (-115.095,97.103,38.519)
C5: (-113.740,97.536,38.643)
C4: (-113.165,98.249,37.599)
P: (-113.134,102.332,32.986)
C4': (-110.859,101.226,35.941)
C2': (-110.706,98.839,35.780)
O2': (-109.844,97.728,35.636)
N1: (-115.651,97.487,37.296)
N2: (-115.685,98.485,35.196)
N3: (-113.736,98.610,36.424)
N7: (-112.832,97.371,39.680)
N9: (-111.869,98.527,37.993)
O5': (-111.907,102.239,33.996)
O3': (-108.788,100.207,35.205)
OP1: (-108.573,98.736,44.355)
OP2: (-109.209,99.876,42.161)
C3': (-113.386,97.061,44.236)
C1': (-114.226,98.659,42.718)
C5': (-111.664,98.842,44.955)
O4': (-113.754,99.378,43.847)
C8: (-112.762,100.054,41.186)
O2': (-114.206,96.326,42.020)
C6: (-114.770,100.963,38.444)
C5: (-114.103,100.519,39.601)
C4: (-114.825,99.744,40.500)
P: (-109.521,99.578,43.583)
C4': (-113.129,98.464,44.790)
C2': (-113.501,97.317,42.739)
C2: (-116.635,99.836,39.263)
N1: (-116.063,100.593,38.309)
N3: (-116.111,99.361,40.389)
N6: (-114.200,101.713,37.493)
N7: (-112.801,100.706,40.049)
N9: (-113.952,99.455,41.521)
O5': (-111.001,98.980,43.694)
O3': (-114.632,96.565,44.733)
OP2: (-109.209,99.876,42.161)
C3': (-113.386,97.061,44.236)
C1': (-114.226,98.659,42.718)
C5': (-111.664,98.842,44.955)
O4': (-113.754,99.378,43.847)
C8: (-112.762,100.054,41.186)
O2': (-114.206,96.326,42.020)
C6: (-114.770,100.963,38.444)
C5: (-114.103,100.519,39.601)
C4: (-114.825,99.744,40.500)
P: (-109.521,99.578,43.583)
C4': (-113.129,98.464,44.790)
C2': (-113.501,97.317,42.739)
C2: (-116.635,99.836,39.263)
N1: (-116.063,100.593,38.309)
N3: (-116.111,99.361,40.389)
N6: (-114.200,101.713,37.493)
N7: (-112.801,100.706,40.049)
N9: (-113.952,99.455,41.521)
O5': (-111.001,98.980,43.694)
O3': (-114.632,96.565,44.733)
Image (generated by PyMOL):