Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02038:02490
Extra
PDB:
ATOM 1 O3' G A2037 58.698 144.171 109.194 1.00 29.81 O
ATOM 2 P G A2038 59.114 143.080 108.107 1.00 27.97 P
ATOM 3 OP1 G A2038 60.587 143.002 108.052 1.00 28.61 O
ATOM 4 OP2 G A2038 58.364 143.418 106.885 1.00 27.90 O
ATOM 5 O5' G A2038 58.508 141.748 108.733 1.00 24.83 O
ATOM 6 C5' G A2038 58.547 140.499 108.023 1.00 28.87 C
ATOM 7 C4' G A2038 57.375 139.632 108.430 1.00 28.24 C
ATOM 8 O4' G A2038 56.138 140.344 108.145 1.00 30.65 O
ATOM 9 C3' G A2038 57.258 138.292 107.717 1.00 26.97 C
ATOM 10 O3' G A2038 56.599 137.396 108.586 1.00 28.28 O
ATOM 11 C2' G A2038 56.311 138.621 106.566 1.00 28.91 C
ATOM 12 O2' G A2038 55.594 137.511 106.053 1.00 25.67 O
ATOM 13 C1' G A2038 55.352 139.589 107.251 1.00 29.55 C
ATOM 14 N9 G A2038 54.679 140.494 106.324 1.00 31.35 N
ATOM 15 C8 G A2038 55.232 141.527 105.608 1.00 29.67 C
ATOM 16 N7 G A2038 54.377 142.117 104.818 1.00 31.02 N
ATOM 17 C5 G A2038 53.181 141.441 105.035 1.00 32.45 C
ATOM 18 C6 G A2038 51.893 141.623 104.451 1.00 31.90 C
ATOM 19 O6 G A2038 51.538 142.445 103.603 1.00 32.86 O
ATOM 20 N1 G A2038 50.972 140.716 104.953 1.00 31.22 N
ATOM 21 C2 G A2038 51.241 139.756 105.892 1.00 33.38 C
ATOM 22 N2 G A2038 50.219 138.963 106.235 1.00 34.40 N
ATOM 23 N3 G A2038 52.426 139.580 106.452 1.00 33.32 N
ATOM 24 C4 G A2038 53.346 140.449 105.974 1.00 32.93 C
ATOM 25 P G A2039 57.440 136.335 109.439 1.00 30.38 P
ATOM 26 OP1 G A2039 58.042 137.104 110.553 1.00 31.52 O
ATOM 27 OP2 G A2039 58.305 135.539 108.545 1.00 27.47 O
ATOM 28 O5' G A2039 56.311 135.375 110.030 1.00 29.44 O
TER
ATOM 1 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 2 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 3 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 4 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 5 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
ATOM 6 C5' A B2490 51.773 142.686 98.054 1.00 32.44 C
ATOM 7 C4' A B2490 50.418 142.103 98.349 1.00 34.85 C
ATOM 8 O4' A B2490 50.661 140.821 98.973 1.00 37.44 O
ATOM 9 C3' A B2490 49.594 142.855 99.387 1.00 35.99 C
ATOM 10 O3' A B2490 48.248 142.382 99.365 1.00 36.15 O
ATOM 11 C2' A B2490 50.264 142.416 100.684 1.00 36.99 C
ATOM 12 O2' A B2490 49.419 142.482 101.810 1.00 37.86 O
ATOM 13 C1' A B2490 50.616 140.960 100.380 1.00 36.92 C
ATOM 14 N9 A B2490 51.925 140.590 100.912 1.00 37.28 N
ATOM 15 C8 A B2490 53.139 141.167 100.648 1.00 36.19 C
ATOM 16 N7 A B2490 54.133 140.629 101.307 1.00 38.77 N
ATOM 17 C5 A B2490 53.534 139.626 102.052 1.00 39.44 C
ATOM 18 C6 A B2490 54.047 138.693 102.966 1.00 41.40 C
ATOM 19 N6 A B2490 55.336 138.629 103.316 1.00 43.36 N
ATOM 20 N1 A B2490 53.180 137.820 103.523 1.00 41.05 N
ATOM 21 C2 A B2490 51.887 137.896 103.187 1.00 40.13 C
ATOM 22 N3 A B2490 51.285 138.733 102.353 1.00 40.00 N
ATOM 23 C4 A B2490 52.176 139.583 101.810 1.00 39.19 C
ATOM 24 P U B2491 47.091 143.211 98.614 1.00 36.19 P
ATOM 25 OP1 U B2491 47.679 144.061 97.545 1.00 34.59 O
ATOM 26 OP2 U B2491 46.230 143.824 99.651 1.00 33.41 O
ATOM 27 O5' U B2491 46.260 142.035 97.937 1.00 34.80 O
TER
ATOM 2 P G A2038 59.114 143.080 108.107 1.00 27.97 P
ATOM 3 OP1 G A2038 60.587 143.002 108.052 1.00 28.61 O
ATOM 4 OP2 G A2038 58.364 143.418 106.885 1.00 27.90 O
ATOM 5 O5' G A2038 58.508 141.748 108.733 1.00 24.83 O
ATOM 6 C5' G A2038 58.547 140.499 108.023 1.00 28.87 C
ATOM 7 C4' G A2038 57.375 139.632 108.430 1.00 28.24 C
ATOM 8 O4' G A2038 56.138 140.344 108.145 1.00 30.65 O
ATOM 9 C3' G A2038 57.258 138.292 107.717 1.00 26.97 C
ATOM 10 O3' G A2038 56.599 137.396 108.586 1.00 28.28 O
ATOM 11 C2' G A2038 56.311 138.621 106.566 1.00 28.91 C
ATOM 12 O2' G A2038 55.594 137.511 106.053 1.00 25.67 O
ATOM 13 C1' G A2038 55.352 139.589 107.251 1.00 29.55 C
ATOM 14 N9 G A2038 54.679 140.494 106.324 1.00 31.35 N
ATOM 15 C8 G A2038 55.232 141.527 105.608 1.00 29.67 C
ATOM 16 N7 G A2038 54.377 142.117 104.818 1.00 31.02 N
ATOM 17 C5 G A2038 53.181 141.441 105.035 1.00 32.45 C
ATOM 18 C6 G A2038 51.893 141.623 104.451 1.00 31.90 C
ATOM 19 O6 G A2038 51.538 142.445 103.603 1.00 32.86 O
ATOM 20 N1 G A2038 50.972 140.716 104.953 1.00 31.22 N
ATOM 21 C2 G A2038 51.241 139.756 105.892 1.00 33.38 C
ATOM 22 N2 G A2038 50.219 138.963 106.235 1.00 34.40 N
ATOM 23 N3 G A2038 52.426 139.580 106.452 1.00 33.32 N
ATOM 24 C4 G A2038 53.346 140.449 105.974 1.00 32.93 C
ATOM 25 P G A2039 57.440 136.335 109.439 1.00 30.38 P
ATOM 26 OP1 G A2039 58.042 137.104 110.553 1.00 31.52 O
ATOM 27 OP2 G A2039 58.305 135.539 108.545 1.00 27.47 O
ATOM 28 O5' G A2039 56.311 135.375 110.030 1.00 29.44 O
TER
ATOM 1 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 2 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 3 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 4 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 5 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
ATOM 6 C5' A B2490 51.773 142.686 98.054 1.00 32.44 C
ATOM 7 C4' A B2490 50.418 142.103 98.349 1.00 34.85 C
ATOM 8 O4' A B2490 50.661 140.821 98.973 1.00 37.44 O
ATOM 9 C3' A B2490 49.594 142.855 99.387 1.00 35.99 C
ATOM 10 O3' A B2490 48.248 142.382 99.365 1.00 36.15 O
ATOM 11 C2' A B2490 50.264 142.416 100.684 1.00 36.99 C
ATOM 12 O2' A B2490 49.419 142.482 101.810 1.00 37.86 O
ATOM 13 C1' A B2490 50.616 140.960 100.380 1.00 36.92 C
ATOM 14 N9 A B2490 51.925 140.590 100.912 1.00 37.28 N
ATOM 15 C8 A B2490 53.139 141.167 100.648 1.00 36.19 C
ATOM 16 N7 A B2490 54.133 140.629 101.307 1.00 38.77 N
ATOM 17 C5 A B2490 53.534 139.626 102.052 1.00 39.44 C
ATOM 18 C6 A B2490 54.047 138.693 102.966 1.00 41.40 C
ATOM 19 N6 A B2490 55.336 138.629 103.316 1.00 43.36 N
ATOM 20 N1 A B2490 53.180 137.820 103.523 1.00 41.05 N
ATOM 21 C2 A B2490 51.887 137.896 103.187 1.00 40.13 C
ATOM 22 N3 A B2490 51.285 138.733 102.353 1.00 40.00 N
ATOM 23 C4 A B2490 52.176 139.583 101.810 1.00 39.19 C
ATOM 24 P U B2491 47.091 143.211 98.614 1.00 36.19 P
ATOM 25 OP1 U B2491 47.679 144.061 97.545 1.00 34.59 O
ATOM 26 OP2 U B2491 46.230 143.824 99.651 1.00 33.41 O
ATOM 27 O5' U B2491 46.260 142.035 97.937 1.00 34.80 O
TER
Atoms:
OP1: (60.587,143.002,108.052)
OP2: (58.364,143.418,106.885)
C3': (57.258,138.292,107.717)
C1': (55.352,139.589,107.251)
C5': (58.547,140.499,108.023)
O6: (51.538,142.445,103.603)
O4': (56.138,140.344,108.145)
C8: (55.232,141.527,105.608)
C2: (51.241,139.756,105.892)
C6: (51.893,141.623,104.451)
C5: (53.181,141.441,105.035)
C4: (53.346,140.449,105.974)
P: (59.114,143.080,108.107)
C4': (57.375,139.632,108.430)
C2': (56.311,138.621,106.566)
O2': (55.594,137.511,106.053)
N1: (50.972,140.716,104.953)
N2: (50.219,138.963,106.235)
N3: (52.426,139.580,106.452)
N7: (54.377,142.117,104.818)
N9: (54.679,140.494,106.324)
O5': (58.508,141.748,108.733)
O3': (56.599,137.396,108.586)
OP2: (58.364,143.418,106.885)
C3': (57.258,138.292,107.717)
C1': (55.352,139.589,107.251)
C5': (58.547,140.499,108.023)
O6: (51.538,142.445,103.603)
O4': (56.138,140.344,108.145)
C8: (55.232,141.527,105.608)
C2: (51.241,139.756,105.892)
C6: (51.893,141.623,104.451)
C5: (53.181,141.441,105.035)
C4: (53.346,140.449,105.974)
P: (59.114,143.080,108.107)
C4': (57.375,139.632,108.430)
C2': (56.311,138.621,106.566)
O2': (55.594,137.511,106.053)
N1: (50.972,140.716,104.953)
N2: (50.219,138.963,106.235)
N3: (52.426,139.580,106.452)
N7: (54.377,142.117,104.818)
N9: (54.679,140.494,106.324)
O5': (58.508,141.748,108.733)
O3': (56.599,137.396,108.586)
OP1: (51.885,146.090,99.368)
OP2: (53.616,144.232,99.590)
C3': (49.594,142.855,99.387)
C1': (50.616,140.960,100.380)
C5': (51.773,142.686,98.054)
O4': (50.661,140.821,98.973)
C8: (53.139,141.167,100.648)
O2': (49.419,142.482,101.810)
C6: (54.047,138.693,102.966)
C5: (53.534,139.626,102.052)
C4: (52.176,139.583,101.810)
P: (52.705,145.033,98.747)
C4': (50.418,142.103,98.349)
C2': (50.264,142.416,100.684)
C2: (51.887,137.896,103.187)
N1: (53.180,137.820,103.523)
N3: (51.285,138.733,102.353)
N6: (55.336,138.629,103.316)
N7: (54.133,140.629,101.307)
N9: (51.925,140.590,100.912)
O5': (51.687,144.093,97.965)
O3': (48.248,142.382,99.365)
OP2: (53.616,144.232,99.590)
C3': (49.594,142.855,99.387)
C1': (50.616,140.960,100.380)
C5': (51.773,142.686,98.054)
O4': (50.661,140.821,98.973)
C8: (53.139,141.167,100.648)
O2': (49.419,142.482,101.810)
C6: (54.047,138.693,102.966)
C5: (53.534,139.626,102.052)
C4: (52.176,139.583,101.810)
P: (52.705,145.033,98.747)
C4': (50.418,142.103,98.349)
C2': (50.264,142.416,100.684)
C2: (51.887,137.896,103.187)
N1: (53.180,137.820,103.523)
N3: (51.285,138.733,102.353)
N6: (55.336,138.629,103.316)
N7: (54.133,140.629,101.307)
N9: (51.925,140.590,100.912)
O5': (51.687,144.093,97.965)
O3': (48.248,142.382,99.365)
Image (generated by PyMOL):