Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:046:049
Extra
PDB:
ATOM 1 O3' U A 45 54.711 164.722 36.164 1.00 51.64 O
ATOM 2 P G A 46 53.723 165.611 37.060 1.00 53.15 P
ATOM 3 OP1 G A 46 53.410 166.836 36.288 1.00 55.61 O
ATOM 4 OP2 G A 46 54.276 165.725 38.426 1.00 55.39 O
ATOM 5 O5' G A 46 52.390 164.750 37.128 1.00 56.10 O
ATOM 6 C5' G A 46 51.695 164.408 35.924 1.00 56.15 C
ATOM 7 C4' G A 46 50.213 164.437 36.154 1.00 56.65 C
ATOM 8 O4' G A 46 49.830 163.327 37.010 1.00 58.75 O
ATOM 9 C3' G A 46 49.653 165.691 36.815 1.00 57.41 C
ATOM 10 O3' G A 46 48.369 165.916 36.250 1.00 60.23 O
ATOM 11 C2' G A 46 49.491 165.253 38.269 1.00 57.17 C
ATOM 12 O2' G A 46 48.502 165.992 38.956 1.00 55.05 O
ATOM 13 C1' G A 46 49.038 163.807 38.075 1.00 56.46 C
ATOM 14 N9 G A 46 49.167 162.878 39.196 1.00 56.63 N
ATOM 15 C8 G A 46 49.882 163.043 40.362 1.00 55.75 C
ATOM 16 N7 G A 46 49.805 162.012 41.162 1.00 54.59 N
ATOM 17 C5 G A 46 48.991 161.112 40.486 1.00 55.76 C
ATOM 18 C6 G A 46 48.557 159.809 40.847 1.00 54.96 C
ATOM 19 O6 G A 46 48.822 159.164 41.862 1.00 54.13 O
ATOM 20 N1 G A 46 47.737 159.252 39.870 1.00 56.47 N
ATOM 21 C2 G A 46 47.384 159.863 38.693 1.00 55.50 C
ATOM 22 N2 G A 46 46.583 159.165 37.883 1.00 54.15 N
ATOM 23 N3 G A 46 47.789 161.070 38.339 1.00 56.33 N
ATOM 24 C4 G A 46 48.583 161.634 39.275 1.00 56.40 C
ATOM 25 P C A 47 48.046 167.312 35.533 1.00 61.48 P
ATOM 26 OP1 C A 47 46.676 167.199 34.973 1.00 64.01 O
ATOM 27 OP2 C A 47 49.180 167.628 34.633 1.00 61.43 O
ATOM 28 O5' C A 47 48.002 168.345 36.744 1.00 61.82 O
TER
ATOM 1 O3' C B 48 48.622 169.220 45.546 1.00 78.90 O
ATOM 2 P A B 49 50.009 168.415 45.394 1.00 78.73 P
ATOM 3 OP1 A B 49 50.795 168.645 46.641 1.00 78.76 O
ATOM 4 OP2 A B 49 50.613 168.755 44.074 1.00 79.04 O
ATOM 5 O5' A B 49 49.561 166.886 45.346 1.00 75.60 O
ATOM 6 C5' A B 49 48.938 166.266 46.482 1.00 69.53 C
ATOM 7 C4' A B 49 49.093 164.765 46.420 1.00 66.43 C
ATOM 8 O4' A B 49 48.012 164.173 45.641 1.00 65.24 O
ATOM 9 C3' A B 49 50.398 164.238 45.823 1.00 63.42 C
ATOM 10 O3' A B 49 50.928 163.205 46.644 1.00 61.18 O
ATOM 11 C2' A B 49 49.949 163.667 44.476 1.00 63.59 C
ATOM 12 O2' A B 49 50.757 162.609 44.000 1.00 64.17 O
ATOM 13 C1' A B 49 48.547 163.163 44.814 1.00 63.17 C
ATOM 14 N9 A B 49 47.664 162.984 43.660 1.00 61.55 N
ATOM 15 C8 A B 49 47.486 163.828 42.593 1.00 61.20 C
ATOM 16 N7 A B 49 46.640 163.381 41.699 1.00 61.22 N
ATOM 17 C5 A B 49 46.225 162.162 42.213 1.00 61.28 C
ATOM 18 C6 A B 49 45.331 161.190 41.734 1.00 60.88 C
ATOM 19 N6 A B 49 44.676 161.294 40.576 1.00 60.29 N
ATOM 20 N1 A B 49 45.134 160.091 42.492 1.00 59.33 N
ATOM 21 C2 A B 49 45.798 159.983 43.644 1.00 59.25 C
ATOM 22 N3 A B 49 46.668 160.822 44.198 1.00 60.22 N
ATOM 23 C4 A B 49 46.841 161.907 43.424 1.00 61.37 C
ATOM 24 P A B 50 52.440 163.321 47.184 1.00 58.84 P
ATOM 25 OP1 A B 50 52.457 164.373 48.228 1.00 60.37 O
ATOM 26 OP2 A B 50 53.360 163.423 46.025 1.00 60.05 O
ATOM 27 O5' A B 50 52.687 161.924 47.896 1.00 58.73 O
TER
ATOM 2 P G A 46 53.723 165.611 37.060 1.00 53.15 P
ATOM 3 OP1 G A 46 53.410 166.836 36.288 1.00 55.61 O
ATOM 4 OP2 G A 46 54.276 165.725 38.426 1.00 55.39 O
ATOM 5 O5' G A 46 52.390 164.750 37.128 1.00 56.10 O
ATOM 6 C5' G A 46 51.695 164.408 35.924 1.00 56.15 C
ATOM 7 C4' G A 46 50.213 164.437 36.154 1.00 56.65 C
ATOM 8 O4' G A 46 49.830 163.327 37.010 1.00 58.75 O
ATOM 9 C3' G A 46 49.653 165.691 36.815 1.00 57.41 C
ATOM 10 O3' G A 46 48.369 165.916 36.250 1.00 60.23 O
ATOM 11 C2' G A 46 49.491 165.253 38.269 1.00 57.17 C
ATOM 12 O2' G A 46 48.502 165.992 38.956 1.00 55.05 O
ATOM 13 C1' G A 46 49.038 163.807 38.075 1.00 56.46 C
ATOM 14 N9 G A 46 49.167 162.878 39.196 1.00 56.63 N
ATOM 15 C8 G A 46 49.882 163.043 40.362 1.00 55.75 C
ATOM 16 N7 G A 46 49.805 162.012 41.162 1.00 54.59 N
ATOM 17 C5 G A 46 48.991 161.112 40.486 1.00 55.76 C
ATOM 18 C6 G A 46 48.557 159.809 40.847 1.00 54.96 C
ATOM 19 O6 G A 46 48.822 159.164 41.862 1.00 54.13 O
ATOM 20 N1 G A 46 47.737 159.252 39.870 1.00 56.47 N
ATOM 21 C2 G A 46 47.384 159.863 38.693 1.00 55.50 C
ATOM 22 N2 G A 46 46.583 159.165 37.883 1.00 54.15 N
ATOM 23 N3 G A 46 47.789 161.070 38.339 1.00 56.33 N
ATOM 24 C4 G A 46 48.583 161.634 39.275 1.00 56.40 C
ATOM 25 P C A 47 48.046 167.312 35.533 1.00 61.48 P
ATOM 26 OP1 C A 47 46.676 167.199 34.973 1.00 64.01 O
ATOM 27 OP2 C A 47 49.180 167.628 34.633 1.00 61.43 O
ATOM 28 O5' C A 47 48.002 168.345 36.744 1.00 61.82 O
TER
ATOM 1 O3' C B 48 48.622 169.220 45.546 1.00 78.90 O
ATOM 2 P A B 49 50.009 168.415 45.394 1.00 78.73 P
ATOM 3 OP1 A B 49 50.795 168.645 46.641 1.00 78.76 O
ATOM 4 OP2 A B 49 50.613 168.755 44.074 1.00 79.04 O
ATOM 5 O5' A B 49 49.561 166.886 45.346 1.00 75.60 O
ATOM 6 C5' A B 49 48.938 166.266 46.482 1.00 69.53 C
ATOM 7 C4' A B 49 49.093 164.765 46.420 1.00 66.43 C
ATOM 8 O4' A B 49 48.012 164.173 45.641 1.00 65.24 O
ATOM 9 C3' A B 49 50.398 164.238 45.823 1.00 63.42 C
ATOM 10 O3' A B 49 50.928 163.205 46.644 1.00 61.18 O
ATOM 11 C2' A B 49 49.949 163.667 44.476 1.00 63.59 C
ATOM 12 O2' A B 49 50.757 162.609 44.000 1.00 64.17 O
ATOM 13 C1' A B 49 48.547 163.163 44.814 1.00 63.17 C
ATOM 14 N9 A B 49 47.664 162.984 43.660 1.00 61.55 N
ATOM 15 C8 A B 49 47.486 163.828 42.593 1.00 61.20 C
ATOM 16 N7 A B 49 46.640 163.381 41.699 1.00 61.22 N
ATOM 17 C5 A B 49 46.225 162.162 42.213 1.00 61.28 C
ATOM 18 C6 A B 49 45.331 161.190 41.734 1.00 60.88 C
ATOM 19 N6 A B 49 44.676 161.294 40.576 1.00 60.29 N
ATOM 20 N1 A B 49 45.134 160.091 42.492 1.00 59.33 N
ATOM 21 C2 A B 49 45.798 159.983 43.644 1.00 59.25 C
ATOM 22 N3 A B 49 46.668 160.822 44.198 1.00 60.22 N
ATOM 23 C4 A B 49 46.841 161.907 43.424 1.00 61.37 C
ATOM 24 P A B 50 52.440 163.321 47.184 1.00 58.84 P
ATOM 25 OP1 A B 50 52.457 164.373 48.228 1.00 60.37 O
ATOM 26 OP2 A B 50 53.360 163.423 46.025 1.00 60.05 O
ATOM 27 O5' A B 50 52.687 161.924 47.896 1.00 58.73 O
TER
Atoms:
OP1: (53.410,166.836,36.288)
OP2: (54.276,165.725,38.426)
C3': (49.653,165.691,36.815)
C1': (49.038,163.807,38.075)
C5': (51.695,164.408,35.924)
O6: (48.822,159.164,41.862)
O4': (49.830,163.327,37.010)
C8: (49.882,163.043,40.362)
C2: (47.384,159.863,38.693)
C6: (48.557,159.809,40.847)
C5: (48.991,161.112,40.486)
C4: (48.583,161.634,39.275)
P: (53.723,165.611,37.060)
C4': (50.213,164.437,36.154)
C2': (49.491,165.253,38.269)
O2': (48.502,165.992,38.956)
N1: (47.737,159.252,39.870)
N2: (46.583,159.165,37.883)
N3: (47.789,161.070,38.339)
N7: (49.805,162.012,41.162)
N9: (49.167,162.878,39.196)
O5': (52.390,164.750,37.128)
O3': (48.369,165.916,36.250)
OP2: (54.276,165.725,38.426)
C3': (49.653,165.691,36.815)
C1': (49.038,163.807,38.075)
C5': (51.695,164.408,35.924)
O6: (48.822,159.164,41.862)
O4': (49.830,163.327,37.010)
C8: (49.882,163.043,40.362)
C2: (47.384,159.863,38.693)
C6: (48.557,159.809,40.847)
C5: (48.991,161.112,40.486)
C4: (48.583,161.634,39.275)
P: (53.723,165.611,37.060)
C4': (50.213,164.437,36.154)
C2': (49.491,165.253,38.269)
O2': (48.502,165.992,38.956)
N1: (47.737,159.252,39.870)
N2: (46.583,159.165,37.883)
N3: (47.789,161.070,38.339)
N7: (49.805,162.012,41.162)
N9: (49.167,162.878,39.196)
O5': (52.390,164.750,37.128)
O3': (48.369,165.916,36.250)
OP1: (50.795,168.645,46.641)
OP2: (50.613,168.755,44.074)
C3': (50.398,164.238,45.823)
C1': (48.547,163.163,44.814)
C5': (48.938,166.266,46.482)
O4': (48.012,164.173,45.641)
C8: (47.486,163.828,42.593)
O2': (50.757,162.609,44.000)
C6: (45.331,161.190,41.734)
C5: (46.225,162.162,42.213)
C4: (46.841,161.907,43.424)
P: (50.009,168.415,45.394)
C4': (49.093,164.765,46.420)
C2': (49.949,163.667,44.476)
C2: (45.798,159.983,43.644)
N1: (45.134,160.091,42.492)
N3: (46.668,160.822,44.198)
N6: (44.676,161.294,40.576)
N7: (46.640,163.381,41.699)
N9: (47.664,162.984,43.660)
O5': (49.561,166.886,45.346)
O3': (50.928,163.205,46.644)
OP2: (50.613,168.755,44.074)
C3': (50.398,164.238,45.823)
C1': (48.547,163.163,44.814)
C5': (48.938,166.266,46.482)
O4': (48.012,164.173,45.641)
C8: (47.486,163.828,42.593)
O2': (50.757,162.609,44.000)
C6: (45.331,161.190,41.734)
C5: (46.225,162.162,42.213)
C4: (46.841,161.907,43.424)
P: (50.009,168.415,45.394)
C4': (49.093,164.765,46.420)
C2': (49.949,163.667,44.476)
C2: (45.798,159.983,43.644)
N1: (45.134,160.091,42.492)
N3: (46.668,160.822,44.198)
N6: (44.676,161.294,40.576)
N7: (46.640,163.381,41.699)
N9: (47.664,162.984,43.660)
O5': (49.561,166.886,45.346)
O3': (50.928,163.205,46.644)
Image (generated by PyMOL):