Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1A9N:Q12:Q11
Extra
PDB:
ATOM 1 O3' A A 11 35.738 12.616 -0.927 1.00 52.45 O
ATOM 2 P G A 12 36.395 14.050 -0.654 1.00 42.73 P
ATOM 3 OP1 G A 12 35.777 14.887 -1.711 1.00 54.39 O
ATOM 4 OP2 G A 12 37.869 13.951 -0.775 1.00 50.06 O
ATOM 5 O5' G A 12 36.027 14.505 0.789 1.00 46.03 O
ATOM 6 C5' G A 12 34.731 14.352 1.365 1.00 46.57 C
ATOM 7 C4' G A 12 34.799 14.598 2.861 1.00 44.15 C
ATOM 8 O4' G A 12 35.500 13.429 3.417 1.00 50.32 O
ATOM 9 C3' G A 12 35.588 15.819 3.326 1.00 44.36 C
ATOM 10 O3' G A 12 34.946 16.487 4.398 1.00 48.09 O
ATOM 11 C2' G A 12 36.912 15.203 3.754 1.00 43.94 C
ATOM 12 O2' G A 12 37.711 15.858 4.717 1.00 46.88 O
ATOM 13 C1' G A 12 36.384 13.904 4.403 1.00 42.68 C
ATOM 14 N9 G A 12 37.493 12.997 4.716 1.00 42.37 N
ATOM 15 C8 G A 12 37.814 12.482 5.964 1.00 43.60 C
ATOM 16 N7 G A 12 38.861 11.708 5.978 1.00 39.90 N
ATOM 17 C5 G A 12 39.285 11.694 4.650 1.00 40.30 C
ATOM 18 C6 G A 12 40.380 11.021 4.055 1.00 41.59 C
ATOM 19 O6 G A 12 41.214 10.283 4.577 1.00 42.44 O
ATOM 20 N1 G A 12 40.487 11.255 2.681 1.00 38.74 N
ATOM 21 C2 G A 12 39.605 12.064 2.016 1.00 43.25 C
ATOM 22 N2 G A 12 39.819 12.199 0.705 1.00 50.06 N
ATOM 23 N3 G A 12 38.580 12.688 2.576 1.00 43.27 N
ATOM 24 C4 G A 12 38.458 12.476 3.890 1.00 40.01 C
ATOM 25 P U A 13 34.770 18.089 4.510 1.00 47.73 P
ATOM 26 OP1 U A 13 35.822 18.752 3.656 1.00 50.16 O
ATOM 27 OP2 U A 13 34.723 18.511 5.917 1.00 47.05 O
ATOM 28 O5' U A 13 33.338 18.405 3.867 1.00 50.53 O
TER
ATOM 1 O3' C B 10 38.394 7.614 -3.355 1.00 51.73 O
ATOM 2 P A B 11 38.820 9.117 -3.701 1.00 50.59 P
ATOM 3 OP1 A B 11 38.330 9.457 -5.063 1.00 54.31 O
ATOM 4 OP2 A B 11 40.252 9.257 -3.441 1.00 52.83 O
ATOM 5 O5' A B 11 38.020 10.048 -2.676 1.00 47.47 O
ATOM 6 C5' A B 11 36.593 10.119 -2.809 1.00 48.95 C
ATOM 7 C4' A B 11 35.935 10.264 -1.462 1.00 46.19 C
ATOM 8 O4' A B 11 36.229 9.099 -0.647 1.00 47.38 O
ATOM 9 C3' A B 11 36.421 11.413 -0.605 1.00 48.71 C
ATOM 10 O3' A B 11 35.738 12.616 -0.927 1.00 52.45 O
ATOM 11 C2' A B 11 35.967 10.965 0.787 1.00 48.42 C
ATOM 12 O2' A B 11 34.568 11.208 0.929 1.00 45.38 O
ATOM 13 C1' A B 11 36.250 9.493 0.735 1.00 46.41 C
ATOM 14 N9 A B 11 37.549 8.961 1.220 1.00 46.22 N
ATOM 15 C8 A B 11 38.638 8.660 0.413 1.00 45.80 C
ATOM 16 N7 A B 11 39.645 8.202 1.060 1.00 46.88 N
ATOM 17 C5 A B 11 39.222 8.179 2.389 1.00 47.90 C
ATOM 18 C6 A B 11 39.853 7.781 3.580 1.00 49.20 C
ATOM 19 N6 A B 11 41.109 7.312 3.639 1.00 51.25 N
ATOM 20 N1 A B 11 39.164 7.889 4.730 1.00 45.40 N
ATOM 21 C2 A B 11 37.920 8.368 4.636 1.00 44.48 C
ATOM 22 N3 A B 11 37.240 8.764 3.593 1.00 42.10 N
ATOM 23 C4 A B 11 37.943 8.647 2.476 1.00 43.90 C
ATOM 24 P G B 12 36.395 14.050 -0.654 1.00 42.73 P
ATOM 25 OP1 G B 12 35.777 14.887 -1.711 1.00 54.39 O
ATOM 26 OP2 G B 12 37.869 13.951 -0.775 1.00 50.06 O
ATOM 27 O5' G B 12 36.027 14.505 0.789 1.00 46.03 O
TER
ATOM 2 P G A 12 36.395 14.050 -0.654 1.00 42.73 P
ATOM 3 OP1 G A 12 35.777 14.887 -1.711 1.00 54.39 O
ATOM 4 OP2 G A 12 37.869 13.951 -0.775 1.00 50.06 O
ATOM 5 O5' G A 12 36.027 14.505 0.789 1.00 46.03 O
ATOM 6 C5' G A 12 34.731 14.352 1.365 1.00 46.57 C
ATOM 7 C4' G A 12 34.799 14.598 2.861 1.00 44.15 C
ATOM 8 O4' G A 12 35.500 13.429 3.417 1.00 50.32 O
ATOM 9 C3' G A 12 35.588 15.819 3.326 1.00 44.36 C
ATOM 10 O3' G A 12 34.946 16.487 4.398 1.00 48.09 O
ATOM 11 C2' G A 12 36.912 15.203 3.754 1.00 43.94 C
ATOM 12 O2' G A 12 37.711 15.858 4.717 1.00 46.88 O
ATOM 13 C1' G A 12 36.384 13.904 4.403 1.00 42.68 C
ATOM 14 N9 G A 12 37.493 12.997 4.716 1.00 42.37 N
ATOM 15 C8 G A 12 37.814 12.482 5.964 1.00 43.60 C
ATOM 16 N7 G A 12 38.861 11.708 5.978 1.00 39.90 N
ATOM 17 C5 G A 12 39.285 11.694 4.650 1.00 40.30 C
ATOM 18 C6 G A 12 40.380 11.021 4.055 1.00 41.59 C
ATOM 19 O6 G A 12 41.214 10.283 4.577 1.00 42.44 O
ATOM 20 N1 G A 12 40.487 11.255 2.681 1.00 38.74 N
ATOM 21 C2 G A 12 39.605 12.064 2.016 1.00 43.25 C
ATOM 22 N2 G A 12 39.819 12.199 0.705 1.00 50.06 N
ATOM 23 N3 G A 12 38.580 12.688 2.576 1.00 43.27 N
ATOM 24 C4 G A 12 38.458 12.476 3.890 1.00 40.01 C
ATOM 25 P U A 13 34.770 18.089 4.510 1.00 47.73 P
ATOM 26 OP1 U A 13 35.822 18.752 3.656 1.00 50.16 O
ATOM 27 OP2 U A 13 34.723 18.511 5.917 1.00 47.05 O
ATOM 28 O5' U A 13 33.338 18.405 3.867 1.00 50.53 O
TER
ATOM 1 O3' C B 10 38.394 7.614 -3.355 1.00 51.73 O
ATOM 2 P A B 11 38.820 9.117 -3.701 1.00 50.59 P
ATOM 3 OP1 A B 11 38.330 9.457 -5.063 1.00 54.31 O
ATOM 4 OP2 A B 11 40.252 9.257 -3.441 1.00 52.83 O
ATOM 5 O5' A B 11 38.020 10.048 -2.676 1.00 47.47 O
ATOM 6 C5' A B 11 36.593 10.119 -2.809 1.00 48.95 C
ATOM 7 C4' A B 11 35.935 10.264 -1.462 1.00 46.19 C
ATOM 8 O4' A B 11 36.229 9.099 -0.647 1.00 47.38 O
ATOM 9 C3' A B 11 36.421 11.413 -0.605 1.00 48.71 C
ATOM 10 O3' A B 11 35.738 12.616 -0.927 1.00 52.45 O
ATOM 11 C2' A B 11 35.967 10.965 0.787 1.00 48.42 C
ATOM 12 O2' A B 11 34.568 11.208 0.929 1.00 45.38 O
ATOM 13 C1' A B 11 36.250 9.493 0.735 1.00 46.41 C
ATOM 14 N9 A B 11 37.549 8.961 1.220 1.00 46.22 N
ATOM 15 C8 A B 11 38.638 8.660 0.413 1.00 45.80 C
ATOM 16 N7 A B 11 39.645 8.202 1.060 1.00 46.88 N
ATOM 17 C5 A B 11 39.222 8.179 2.389 1.00 47.90 C
ATOM 18 C6 A B 11 39.853 7.781 3.580 1.00 49.20 C
ATOM 19 N6 A B 11 41.109 7.312 3.639 1.00 51.25 N
ATOM 20 N1 A B 11 39.164 7.889 4.730 1.00 45.40 N
ATOM 21 C2 A B 11 37.920 8.368 4.636 1.00 44.48 C
ATOM 22 N3 A B 11 37.240 8.764 3.593 1.00 42.10 N
ATOM 23 C4 A B 11 37.943 8.647 2.476 1.00 43.90 C
ATOM 24 P G B 12 36.395 14.050 -0.654 1.00 42.73 P
ATOM 25 OP1 G B 12 35.777 14.887 -1.711 1.00 54.39 O
ATOM 26 OP2 G B 12 37.869 13.951 -0.775 1.00 50.06 O
ATOM 27 O5' G B 12 36.027 14.505 0.789 1.00 46.03 O
TER
Atoms:
OP1: (35.777,14.887,-1.711)
OP2: (37.869,13.951,-0.775)
C3': (35.588,15.819,3.326)
C1': (36.384,13.904,4.403)
C5': (34.731,14.352,1.365)
O6: (41.214,10.283,4.577)
O4': (35.500,13.429,3.417)
C8: (37.814,12.482,5.964)
C2: (39.605,12.064,2.016)
C6: (40.380,11.021,4.055)
C5: (39.285,11.694,4.650)
C4: (38.458,12.476,3.890)
P: (36.395,14.050,-0.654)
C4': (34.799,14.598,2.861)
C2': (36.912,15.203,3.754)
O2': (37.711,15.858,4.717)
N1: (40.487,11.255,2.681)
N2: (39.819,12.199,0.705)
N3: (38.580,12.688,2.576)
N7: (38.861,11.708,5.978)
N9: (37.493,12.997,4.716)
O5': (36.027,14.505,0.789)
O3': (34.946,16.487,4.398)
OP2: (37.869,13.951,-0.775)
C3': (35.588,15.819,3.326)
C1': (36.384,13.904,4.403)
C5': (34.731,14.352,1.365)
O6: (41.214,10.283,4.577)
O4': (35.500,13.429,3.417)
C8: (37.814,12.482,5.964)
C2: (39.605,12.064,2.016)
C6: (40.380,11.021,4.055)
C5: (39.285,11.694,4.650)
C4: (38.458,12.476,3.890)
P: (36.395,14.050,-0.654)
C4': (34.799,14.598,2.861)
C2': (36.912,15.203,3.754)
O2': (37.711,15.858,4.717)
N1: (40.487,11.255,2.681)
N2: (39.819,12.199,0.705)
N3: (38.580,12.688,2.576)
N7: (38.861,11.708,5.978)
N9: (37.493,12.997,4.716)
O5': (36.027,14.505,0.789)
O3': (34.946,16.487,4.398)
OP1: (38.330,9.457,-5.063)
OP2: (40.252,9.257,-3.441)
C3': (36.421,11.413,-0.605)
C1': (36.250,9.493,0.735)
C5': (36.593,10.119,-2.809)
O4': (36.229,9.099,-0.647)
C8: (38.638,8.660,0.413)
O2': (34.568,11.208,0.929)
C6: (39.853,7.781,3.580)
C5: (39.222,8.179,2.389)
C4: (37.943,8.647,2.476)
P: (38.820,9.117,-3.701)
C4': (35.935,10.264,-1.462)
C2': (35.967,10.965,0.787)
C2: (37.920,8.368,4.636)
N1: (39.164,7.889,4.730)
N3: (37.240,8.764,3.593)
N6: (41.109,7.312,3.639)
N7: (39.645,8.202,1.060)
N9: (37.549,8.961,1.220)
O5': (38.020,10.048,-2.676)
O3': (35.738,12.616,-0.927)
OP2: (40.252,9.257,-3.441)
C3': (36.421,11.413,-0.605)
C1': (36.250,9.493,0.735)
C5': (36.593,10.119,-2.809)
O4': (36.229,9.099,-0.647)
C8: (38.638,8.660,0.413)
O2': (34.568,11.208,0.929)
C6: (39.853,7.781,3.580)
C5: (39.222,8.179,2.389)
C4: (37.943,8.647,2.476)
P: (38.820,9.117,-3.701)
C4': (35.935,10.264,-1.462)
C2': (35.967,10.965,0.787)
C2: (37.920,8.368,4.636)
N1: (39.164,7.889,4.730)
N3: (37.240,8.764,3.593)
N6: (41.109,7.312,3.639)
N7: (39.645,8.202,1.060)
N9: (37.549,8.961,1.220)
O5': (38.020,10.048,-2.676)
O3': (35.738,12.616,-0.927)
Image (generated by PyMOL):