ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A769:A749

Extra

PDB:
ATOM 1 O3' G A 768 83.515 11.381 -26.552 1.00 63.37 O
ATOM 2 P G A 769 81.956 11.568 -26.247 1.00 64.58 P
ATOM 3 OP1 G A 769 81.177 10.846 -27.289 1.00 59.13 O
ATOM 4 OP2 G A 769 81.711 13.011 -25.993 1.00 56.82 O
ATOM 5 O5' G A 769 81.775 10.826 -24.854 1.00 60.65 O
ATOM 6 C5' G A 769 82.140 9.465 -24.694 1.00 61.37 C
ATOM 7 C4' G A 769 81.811 9.036 -23.299 1.00 57.74 C
ATOM 8 O4' G A 769 82.745 9.633 -22.366 1.00 57.82 O
ATOM 9 C3' G A 769 80.441 9.532 -22.892 1.00 55.81 C
ATOM 10 O3' G A 769 79.485 8.574 -23.338 1.00 49.86 O
ATOM 11 C2' G A 769 80.579 9.712 -21.384 1.00 60.48 C
ATOM 12 O2' G A 769 80.406 8.497 -20.685 1.00 55.69 O
ATOM 13 C1' G A 769 82.047 10.148 -21.253 1.00 58.33 C
ATOM 14 N9 G A 769 82.296 11.589 -21.230 1.00 56.36 N
ATOM 15 C8 G A 769 82.437 12.410 -22.328 1.00 59.56 C
ATOM 16 N7 G A 769 82.723 13.646 -22.013 1.00 60.95 N
ATOM 17 C5 G A 769 82.761 13.651 -20.624 1.00 55.19 C
ATOM 18 C6 G A 769 83.035 14.710 -19.711 1.00 51.22 C
ATOM 19 O6 G A 769 83.325 15.896 -19.961 1.00 48.42 O
ATOM 20 N1 G A 769 82.958 14.275 -18.391 1.00 50.30 N
ATOM 21 C2 G A 769 82.669 12.993 -17.996 1.00 46.22 C
ATOM 22 N2 G A 769 82.652 12.770 -16.682 1.00 41.48 N
ATOM 23 N3 G A 769 82.419 12.001 -18.832 1.00 49.29 N
ATOM 24 C4 G A 769 82.482 12.393 -20.122 1.00 53.38 C
ATOM 25 P U A 770 77.937 8.745 -22.991 1.00 65.65 P
ATOM 26 OP1 U A 770 77.171 8.089 -24.087 1.00 52.31 O
ATOM 27 OP2 U A 770 77.666 10.163 -22.639 1.00 53.81 O
ATOM 28 O5' U A 770 77.791 7.923 -21.634 1.00 58.80 O
TER

ATOM 1 O3' C B 748 80.307 20.979 -19.863 1.00 52.97 O
ATOM 2 P A B 749 81.593 20.012 -19.728 1.00 57.70 P
ATOM 3 OP1 A B 749 82.766 20.811 -19.297 1.00 58.33 O
ATOM 4 OP2 A B 749 81.673 19.203 -20.980 1.00 59.95 O
ATOM 5 O5' A B 749 81.199 19.013 -18.552 1.00 47.72 O
ATOM 6 C5' A B 749 80.705 19.506 -17.310 1.00 49.30 C
ATOM 7 C4' A B 749 80.094 18.382 -16.517 1.00 54.40 C
ATOM 8 O4' A B 749 78.910 17.913 -17.194 1.00 47.91 O
ATOM 9 C3' A B 749 80.980 17.153 -16.370 1.00 57.60 C
ATOM 10 O3' A B 749 81.822 17.295 -15.230 1.00 62.10 O
ATOM 11 C2' A B 749 79.976 16.033 -16.191 1.00 52.74 C
ATOM 12 O2' A B 749 79.556 15.979 -14.850 1.00 57.67 O
ATOM 13 C1' A B 749 78.818 16.509 -17.068 1.00 53.84 C
ATOM 14 N9 A B 749 78.835 15.932 -18.411 1.00 56.62 N
ATOM 15 C8 A B 749 79.488 16.409 -19.523 1.00 54.85 C
ATOM 16 N7 A B 749 79.292 15.688 -20.598 1.00 53.99 N
ATOM 17 C5 A B 749 78.463 14.664 -20.166 1.00 57.01 C
ATOM 18 C6 A B 749 77.896 13.569 -20.832 1.00 61.89 C
ATOM 19 N6 A B 749 78.088 13.326 -22.130 1.00 67.82 N
ATOM 20 N1 A B 749 77.114 12.724 -20.116 1.00 63.69 N
ATOM 21 C2 A B 749 76.931 12.975 -18.817 1.00 55.98 C
ATOM 22 N3 A B 749 77.414 13.973 -18.077 1.00 57.08 N
ATOM 23 C4 A B 749 78.179 14.795 -18.821 1.00 58.17 C
ATOM 24 P A B 750 82.754 16.069 -14.752 1.00 58.74 P
ATOM 25 OP1 A B 750 83.837 16.575 -13.852 1.00 57.79 O
ATOM 26 OP2 A B 750 83.107 15.243 -15.943 1.00 52.67 O
ATOM 27 O5' A B 750 81.798 15.195 -13.844 1.00 49.67 O
TER

Atoms:
OP1: (81.177,10.846,-27.289)
OP2: (81.711,13.011,-25.993)
C3': (80.441,9.532,-22.892)
C1': (82.047,10.148,-21.253)
C5': (82.140,9.465,-24.694)
O6: (83.325,15.896,-19.961)
O4': (82.745,9.633,-22.366)
C8: (82.437,12.410,-22.328)
C2: (82.669,12.993,-17.996)
C6: (83.035,14.710,-19.711)
C5: (82.761,13.651,-20.624)
C4: (82.482,12.393,-20.122)
P: (81.956,11.568,-26.247)
C4': (81.811,9.036,-23.299)
C2': (80.579,9.712,-21.384)
O2': (80.406,8.497,-20.685)
N1: (82.958,14.275,-18.391)
N2: (82.652,12.770,-16.682)
N3: (82.419,12.001,-18.832)
N7: (82.723,13.646,-22.013)
N9: (82.296,11.589,-21.230)
O5': (81.775,10.826,-24.854)
O3': (79.485,8.574,-23.338)
OP1: (82.766,20.811,-19.297)
OP2: (81.673,19.203,-20.980)
C3': (80.980,17.153,-16.370)
C1': (78.818,16.509,-17.068)
C5': (80.705,19.506,-17.310)
O4': (78.910,17.913,-17.194)
C8: (79.488,16.409,-19.523)
O2': (79.556,15.979,-14.850)
C6: (77.896,13.569,-20.832)
C5: (78.463,14.664,-20.166)
C4: (78.179,14.795,-18.821)
P: (81.593,20.012,-19.728)
C4': (80.094,18.382,-16.517)
C2': (79.976,16.033,-16.191)
C2: (76.931,12.975,-18.817)
N1: (77.114,12.724,-20.116)
N3: (77.414,13.973,-18.077)
N6: (78.088,13.326,-22.130)
N7: (79.292,15.688,-20.598)
N9: (78.835,15.932,-18.411)
O5': (81.199,19.013,-18.552)
O3': (81.822,17.295,-15.230)
Image (generated by PyMOL):
PyMOL image
show in jmol