Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1294:1293
Extra
PDB:
ATOM 1 O3' A A 293 36.455 -60.762 131.467 1.00 59.38 O
ATOM 2 P G A 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 3 OP1 G A 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 4 OP2 G A 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 5 O5' G A 294 38.210 -61.649 132.971 1.00 60.10 O
ATOM 6 C5' G A 294 38.773 -62.444 131.945 1.00 59.96 C
ATOM 7 C4' G A 294 40.259 -62.279 131.886 1.00 59.97 C
ATOM 8 O4' G A 294 40.568 -60.913 131.461 1.00 59.39 O
ATOM 9 C3' G A 294 40.976 -62.476 133.217 1.00 60.61 C
ATOM 10 O3' G A 294 42.266 -63.036 132.965 1.00 60.77 O
ATOM 11 C2' G A 294 41.123 -61.034 133.696 1.00 60.37 C
ATOM 12 O2' G A 294 42.114 -60.816 134.664 1.00 60.77 O
ATOM 13 C1' G A 294 41.458 -60.357 132.387 1.00 59.65 C
ATOM 14 N9 G A 294 41.337 -58.901 132.411 1.00 59.22 N
ATOM 15 C8 G A 294 42.325 -58.058 131.978 1.00 58.87 C
ATOM 16 N7 G A 294 42.048 -56.804 132.172 1.00 58.57 N
ATOM 17 C5 G A 294 40.821 -56.812 132.803 1.00 58.75 C
ATOM 18 C6 G A 294 40.041 -55.737 133.278 1.00 58.61 C
ATOM 19 O6 G A 294 40.279 -54.534 133.225 1.00 58.28 O
ATOM 20 N1 G A 294 38.867 -56.165 133.863 1.00 58.91 N
ATOM 21 C2 G A 294 38.498 -57.490 133.978 1.00 59.30 C
ATOM 22 N2 G A 294 37.318 -57.738 134.568 1.00 59.56 N
ATOM 23 N3 G A 294 39.233 -58.515 133.561 1.00 59.46 N
ATOM 24 C4 G A 294 40.373 -58.102 132.974 1.00 59.16 C
ATOM 25 P U A 295 42.531 -64.606 133.146 1.00 87.18 P
ATOM 26 OP1 U A 295 41.273 -65.288 132.829 1.00 87.19 O
ATOM 27 OP2 U A 295 43.121 -64.791 134.467 1.00 87.83 O
ATOM 28 O5' U A 295 43.626 -64.941 132.053 1.00 86.92 O
TER
ATOM 1 O3' A B 292 32.325 -55.391 130.598 1.00 59.33 O
ATOM 2 P A B 293 33.093 -56.344 131.668 1.00 58.08 P
ATOM 3 OP1 A B 293 32.101 -57.294 132.193 1.00 58.53 O
ATOM 4 OP2 A B 293 33.812 -55.468 132.623 1.00 58.24 O
ATOM 5 O5' A B 293 34.127 -57.112 130.777 1.00 57.97 O
ATOM 6 C5' A B 293 34.223 -58.512 130.815 1.00 58.38 C
ATOM 7 C4' A B 293 35.514 -58.949 130.203 1.00 58.31 C
ATOM 8 O4' A B 293 36.104 -57.833 129.475 1.00 57.73 O
ATOM 9 C3' A B 293 36.568 -59.385 131.181 1.00 58.86 C
ATOM 10 O3' A B 293 36.455 -60.762 131.467 1.00 59.38 O
ATOM 11 C2' A B 293 37.885 -59.009 130.490 1.00 58.53 C
ATOM 12 O2' A B 293 38.315 -60.052 129.642 1.00 58.53 O
ATOM 13 C1' A B 293 37.487 -57.825 129.612 1.00 57.83 C
ATOM 14 N9 A B 293 37.875 -56.513 130.168 1.00 57.70 N
ATOM 15 C8 A B 293 37.109 -55.746 130.994 1.00 57.78 C
ATOM 16 N7 A B 293 37.659 -54.592 131.290 1.00 57.61 N
ATOM 17 C5 A B 293 38.847 -54.560 130.581 1.00 57.37 C
ATOM 18 C6 A B 293 39.860 -53.596 130.476 1.00 57.13 C
ATOM 19 N6 A B 293 39.855 -52.419 131.110 1.00 57.08 N
ATOM 20 N1 A B 293 40.907 -53.886 129.691 1.00 56.96 N
ATOM 21 C2 A B 293 40.927 -55.056 129.056 1.00 57.02 C
ATOM 22 N3 A B 293 40.043 -56.031 129.064 1.00 57.24 N
ATOM 23 C4 A B 293 39.000 -55.733 129.872 1.00 57.42 C
ATOM 24 P G B 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 25 OP1 G B 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 26 OP2 G B 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 27 O5' G B 294 38.210 -61.649 132.971 1.00 60.10 O
TER
ATOM 2 P G A 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 3 OP1 G A 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 4 OP2 G A 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 5 O5' G A 294 38.210 -61.649 132.971 1.00 60.10 O
ATOM 6 C5' G A 294 38.773 -62.444 131.945 1.00 59.96 C
ATOM 7 C4' G A 294 40.259 -62.279 131.886 1.00 59.97 C
ATOM 8 O4' G A 294 40.568 -60.913 131.461 1.00 59.39 O
ATOM 9 C3' G A 294 40.976 -62.476 133.217 1.00 60.61 C
ATOM 10 O3' G A 294 42.266 -63.036 132.965 1.00 60.77 O
ATOM 11 C2' G A 294 41.123 -61.034 133.696 1.00 60.37 C
ATOM 12 O2' G A 294 42.114 -60.816 134.664 1.00 60.77 O
ATOM 13 C1' G A 294 41.458 -60.357 132.387 1.00 59.65 C
ATOM 14 N9 G A 294 41.337 -58.901 132.411 1.00 59.22 N
ATOM 15 C8 G A 294 42.325 -58.058 131.978 1.00 58.87 C
ATOM 16 N7 G A 294 42.048 -56.804 132.172 1.00 58.57 N
ATOM 17 C5 G A 294 40.821 -56.812 132.803 1.00 58.75 C
ATOM 18 C6 G A 294 40.041 -55.737 133.278 1.00 58.61 C
ATOM 19 O6 G A 294 40.279 -54.534 133.225 1.00 58.28 O
ATOM 20 N1 G A 294 38.867 -56.165 133.863 1.00 58.91 N
ATOM 21 C2 G A 294 38.498 -57.490 133.978 1.00 59.30 C
ATOM 22 N2 G A 294 37.318 -57.738 134.568 1.00 59.56 N
ATOM 23 N3 G A 294 39.233 -58.515 133.561 1.00 59.46 N
ATOM 24 C4 G A 294 40.373 -58.102 132.974 1.00 59.16 C
ATOM 25 P U A 295 42.531 -64.606 133.146 1.00 87.18 P
ATOM 26 OP1 U A 295 41.273 -65.288 132.829 1.00 87.19 O
ATOM 27 OP2 U A 295 43.121 -64.791 134.467 1.00 87.83 O
ATOM 28 O5' U A 295 43.626 -64.941 132.053 1.00 86.92 O
TER
ATOM 1 O3' A B 292 32.325 -55.391 130.598 1.00 59.33 O
ATOM 2 P A B 293 33.093 -56.344 131.668 1.00 58.08 P
ATOM 3 OP1 A B 293 32.101 -57.294 132.193 1.00 58.53 O
ATOM 4 OP2 A B 293 33.812 -55.468 132.623 1.00 58.24 O
ATOM 5 O5' A B 293 34.127 -57.112 130.777 1.00 57.97 O
ATOM 6 C5' A B 293 34.223 -58.512 130.815 1.00 58.38 C
ATOM 7 C4' A B 293 35.514 -58.949 130.203 1.00 58.31 C
ATOM 8 O4' A B 293 36.104 -57.833 129.475 1.00 57.73 O
ATOM 9 C3' A B 293 36.568 -59.385 131.181 1.00 58.86 C
ATOM 10 O3' A B 293 36.455 -60.762 131.467 1.00 59.38 O
ATOM 11 C2' A B 293 37.885 -59.009 130.490 1.00 58.53 C
ATOM 12 O2' A B 293 38.315 -60.052 129.642 1.00 58.53 O
ATOM 13 C1' A B 293 37.487 -57.825 129.612 1.00 57.83 C
ATOM 14 N9 A B 293 37.875 -56.513 130.168 1.00 57.70 N
ATOM 15 C8 A B 293 37.109 -55.746 130.994 1.00 57.78 C
ATOM 16 N7 A B 293 37.659 -54.592 131.290 1.00 57.61 N
ATOM 17 C5 A B 293 38.847 -54.560 130.581 1.00 57.37 C
ATOM 18 C6 A B 293 39.860 -53.596 130.476 1.00 57.13 C
ATOM 19 N6 A B 293 39.855 -52.419 131.110 1.00 57.08 N
ATOM 20 N1 A B 293 40.907 -53.886 129.691 1.00 56.96 N
ATOM 21 C2 A B 293 40.927 -55.056 129.056 1.00 57.02 C
ATOM 22 N3 A B 293 40.043 -56.031 129.064 1.00 57.24 N
ATOM 23 C4 A B 293 39.000 -55.733 129.872 1.00 57.42 C
ATOM 24 P G B 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 25 OP1 G B 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 26 OP2 G B 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 27 O5' G B 294 38.210 -61.649 132.971 1.00 60.10 O
TER
Atoms:
OP1: (35.874,-62.553,133.092)
OP2: (36.410,-60.165,133.870)
C3': (40.976,-62.476,133.217)
C1': (41.458,-60.357,132.387)
C5': (38.773,-62.444,131.945)
O6: (40.279,-54.534,133.225)
O4': (40.568,-60.913,131.461)
C8: (42.325,-58.058,131.978)
C2: (38.498,-57.490,133.978)
C6: (40.041,-55.737,133.278)
C5: (40.821,-56.812,132.803)
C4: (40.373,-58.102,132.974)
P: (36.677,-61.302,132.954)
C4': (40.259,-62.279,131.886)
C2': (41.123,-61.034,133.696)
O2': (42.114,-60.816,134.664)
N1: (38.867,-56.165,133.863)
N2: (37.318,-57.738,134.568)
N3: (39.233,-58.515,133.561)
N7: (42.048,-56.804,132.172)
N9: (41.337,-58.901,132.411)
O5': (38.210,-61.649,132.971)
O3': (42.266,-63.036,132.965)
OP2: (36.410,-60.165,133.870)
C3': (40.976,-62.476,133.217)
C1': (41.458,-60.357,132.387)
C5': (38.773,-62.444,131.945)
O6: (40.279,-54.534,133.225)
O4': (40.568,-60.913,131.461)
C8: (42.325,-58.058,131.978)
C2: (38.498,-57.490,133.978)
C6: (40.041,-55.737,133.278)
C5: (40.821,-56.812,132.803)
C4: (40.373,-58.102,132.974)
P: (36.677,-61.302,132.954)
C4': (40.259,-62.279,131.886)
C2': (41.123,-61.034,133.696)
O2': (42.114,-60.816,134.664)
N1: (38.867,-56.165,133.863)
N2: (37.318,-57.738,134.568)
N3: (39.233,-58.515,133.561)
N7: (42.048,-56.804,132.172)
N9: (41.337,-58.901,132.411)
O5': (38.210,-61.649,132.971)
O3': (42.266,-63.036,132.965)
OP1: (32.101,-57.294,132.193)
OP2: (33.812,-55.468,132.623)
C3': (36.568,-59.385,131.181)
C1': (37.487,-57.825,129.612)
C5': (34.223,-58.512,130.815)
O4': (36.104,-57.833,129.475)
C8: (37.109,-55.746,130.994)
O2': (38.315,-60.052,129.642)
C6: (39.860,-53.596,130.476)
C5: (38.847,-54.560,130.581)
C4: (39.000,-55.733,129.872)
P: (33.093,-56.344,131.668)
C4': (35.514,-58.949,130.203)
C2': (37.885,-59.009,130.490)
C2: (40.927,-55.056,129.056)
N1: (40.907,-53.886,129.691)
N3: (40.043,-56.031,129.064)
N6: (39.855,-52.419,131.110)
N7: (37.659,-54.592,131.290)
N9: (37.875,-56.513,130.168)
O5': (34.127,-57.112,130.777)
O3': (36.455,-60.762,131.467)
OP2: (33.812,-55.468,132.623)
C3': (36.568,-59.385,131.181)
C1': (37.487,-57.825,129.612)
C5': (34.223,-58.512,130.815)
O4': (36.104,-57.833,129.475)
C8: (37.109,-55.746,130.994)
O2': (38.315,-60.052,129.642)
C6: (39.860,-53.596,130.476)
C5: (38.847,-54.560,130.581)
C4: (39.000,-55.733,129.872)
P: (33.093,-56.344,131.668)
C4': (35.514,-58.949,130.203)
C2': (37.885,-59.009,130.490)
C2: (40.927,-55.056,129.056)
N1: (40.907,-53.886,129.691)
N3: (40.043,-56.031,129.064)
N6: (39.855,-52.419,131.110)
N7: (37.659,-54.592,131.290)
N9: (37.875,-56.513,130.168)
O5': (34.127,-57.112,130.777)
O3': (36.455,-60.762,131.467)
Image (generated by PyMOL):