Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A47:A48
Extra
PDB:
ATOM 1 O3' U A 46 -4.111 -36.056 22.121 1.00 17.49 O
ATOM 2 P G A 47 -2.902 -35.217 21.487 1.00 19.55 P
ATOM 3 OP1 G A 47 -2.792 -33.913 22.198 1.00 18.96 O
ATOM 4 OP2 G A 47 -3.081 -35.235 20.019 1.00 17.12 O
ATOM 5 O5' G A 47 -1.633 -36.109 21.851 1.00 19.34 O
ATOM 6 C5' G A 47 -1.277 -36.345 23.223 1.00 19.31 C
ATOM 7 C4' G A 47 -0.202 -37.394 23.314 1.00 20.25 C
ATOM 8 O4' G A 47 -0.737 -38.672 22.911 1.00 20.66 O
ATOM 9 C3' G A 47 1.020 -37.180 22.437 1.00 21.23 C
ATOM 10 O3' G A 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 11 C2' G A 47 1.549 -38.599 22.265 1.00 20.52 C
ATOM 12 O2' G A 47 2.312 -39.009 23.379 1.00 21.37 O
ATOM 13 C1' G A 47 0.266 -39.421 22.255 1.00 19.75 C
ATOM 14 N9 G A 47 -0.201 -39.742 20.914 1.00 18.46 N
ATOM 15 C8 G A 47 -1.008 -38.979 20.108 1.00 17.76 C
ATOM 16 N7 G A 47 -1.282 -39.552 18.973 1.00 16.81 N
ATOM 17 C5 G A 47 -0.608 -40.760 19.031 1.00 16.28 C
ATOM 18 C6 G A 47 -0.545 -41.804 18.102 1.00 16.50 C
ATOM 19 O6 G A 47 -1.087 -41.885 17.008 1.00 16.94 O
ATOM 20 N1 G A 47 0.240 -42.849 18.559 1.00 17.14 N
ATOM 21 C2 G A 47 0.876 -42.884 19.767 1.00 17.05 C
ATOM 22 N2 G A 47 1.565 -43.997 20.033 1.00 17.99 N
ATOM 23 N3 G A 47 0.830 -41.908 20.650 1.00 17.46 N
ATOM 24 C4 G A 47 0.071 -40.885 20.218 1.00 17.41 C
ATOM 25 P A A 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 26 OP1 A A 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 27 OP2 A A 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 28 O5' A A 48 1.862 -34.536 21.405 1.00 23.07 O
TER
ATOM 1 O3' G B 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 2 P A B 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 3 OP1 A B 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 4 OP2 A B 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 5 O5' A B 48 1.862 -34.536 21.405 1.00 23.07 O
ATOM 6 C5' A B 48 2.053 -33.202 20.862 1.00 20.74 C
ATOM 7 C4' A B 48 1.629 -33.167 19.409 1.00 19.04 C
ATOM 8 O4' A B 48 2.318 -34.228 18.715 1.00 18.42 O
ATOM 9 C3' A B 48 0.146 -33.406 19.174 1.00 19.12 C
ATOM 10 O3' A B 48 -0.207 -32.760 17.954 1.00 20.76 O
ATOM 11 C2' A B 48 0.072 -34.912 18.949 1.00 18.13 C
ATOM 12 O2' A B 48 -1.001 -35.293 18.112 1.00 18.38 O
ATOM 13 C1' A B 48 1.392 -35.180 18.234 1.00 17.29 C
ATOM 14 N9 A B 48 1.952 -36.508 18.483 1.00 15.24 N
ATOM 15 C8 A B 48 2.789 -36.874 19.504 1.00 15.24 C
ATOM 16 N7 A B 48 3.194 -38.115 19.434 1.00 16.76 N
ATOM 17 C5 A B 48 2.565 -38.603 18.302 1.00 14.11 C
ATOM 18 C6 A B 48 2.584 -39.857 17.688 1.00 15.18 C
ATOM 19 N6 A B 48 3.305 -40.885 18.139 1.00 14.64 N
ATOM 20 N1 A B 48 1.831 -40.026 16.580 1.00 14.65 N
ATOM 21 C2 A B 48 1.118 -38.994 16.134 1.00 13.26 C
ATOM 22 N3 A B 48 1.023 -37.765 16.622 1.00 14.00 N
ATOM 23 C4 A B 48 1.782 -37.632 17.720 1.00 13.05 C
ATOM 24 P A B 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 25 OP1 A B 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 26 OP2 A B 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 27 O5' A B 49 0.662 -30.509 17.263 1.00 20.31 O
TER
ATOM 2 P G A 47 -2.902 -35.217 21.487 1.00 19.55 P
ATOM 3 OP1 G A 47 -2.792 -33.913 22.198 1.00 18.96 O
ATOM 4 OP2 G A 47 -3.081 -35.235 20.019 1.00 17.12 O
ATOM 5 O5' G A 47 -1.633 -36.109 21.851 1.00 19.34 O
ATOM 6 C5' G A 47 -1.277 -36.345 23.223 1.00 19.31 C
ATOM 7 C4' G A 47 -0.202 -37.394 23.314 1.00 20.25 C
ATOM 8 O4' G A 47 -0.737 -38.672 22.911 1.00 20.66 O
ATOM 9 C3' G A 47 1.020 -37.180 22.437 1.00 21.23 C
ATOM 10 O3' G A 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 11 C2' G A 47 1.549 -38.599 22.265 1.00 20.52 C
ATOM 12 O2' G A 47 2.312 -39.009 23.379 1.00 21.37 O
ATOM 13 C1' G A 47 0.266 -39.421 22.255 1.00 19.75 C
ATOM 14 N9 G A 47 -0.201 -39.742 20.914 1.00 18.46 N
ATOM 15 C8 G A 47 -1.008 -38.979 20.108 1.00 17.76 C
ATOM 16 N7 G A 47 -1.282 -39.552 18.973 1.00 16.81 N
ATOM 17 C5 G A 47 -0.608 -40.760 19.031 1.00 16.28 C
ATOM 18 C6 G A 47 -0.545 -41.804 18.102 1.00 16.50 C
ATOM 19 O6 G A 47 -1.087 -41.885 17.008 1.00 16.94 O
ATOM 20 N1 G A 47 0.240 -42.849 18.559 1.00 17.14 N
ATOM 21 C2 G A 47 0.876 -42.884 19.767 1.00 17.05 C
ATOM 22 N2 G A 47 1.565 -43.997 20.033 1.00 17.99 N
ATOM 23 N3 G A 47 0.830 -41.908 20.650 1.00 17.46 N
ATOM 24 C4 G A 47 0.071 -40.885 20.218 1.00 17.41 C
ATOM 25 P A A 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 26 OP1 A A 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 27 OP2 A A 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 28 O5' A A 48 1.862 -34.536 21.405 1.00 23.07 O
TER
ATOM 1 O3' G B 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 2 P A B 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 3 OP1 A B 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 4 OP2 A B 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 5 O5' A B 48 1.862 -34.536 21.405 1.00 23.07 O
ATOM 6 C5' A B 48 2.053 -33.202 20.862 1.00 20.74 C
ATOM 7 C4' A B 48 1.629 -33.167 19.409 1.00 19.04 C
ATOM 8 O4' A B 48 2.318 -34.228 18.715 1.00 18.42 O
ATOM 9 C3' A B 48 0.146 -33.406 19.174 1.00 19.12 C
ATOM 10 O3' A B 48 -0.207 -32.760 17.954 1.00 20.76 O
ATOM 11 C2' A B 48 0.072 -34.912 18.949 1.00 18.13 C
ATOM 12 O2' A B 48 -1.001 -35.293 18.112 1.00 18.38 O
ATOM 13 C1' A B 48 1.392 -35.180 18.234 1.00 17.29 C
ATOM 14 N9 A B 48 1.952 -36.508 18.483 1.00 15.24 N
ATOM 15 C8 A B 48 2.789 -36.874 19.504 1.00 15.24 C
ATOM 16 N7 A B 48 3.194 -38.115 19.434 1.00 16.76 N
ATOM 17 C5 A B 48 2.565 -38.603 18.302 1.00 14.11 C
ATOM 18 C6 A B 48 2.584 -39.857 17.688 1.00 15.18 C
ATOM 19 N6 A B 48 3.305 -40.885 18.139 1.00 14.64 N
ATOM 20 N1 A B 48 1.831 -40.026 16.580 1.00 14.65 N
ATOM 21 C2 A B 48 1.118 -38.994 16.134 1.00 13.26 C
ATOM 22 N3 A B 48 1.023 -37.765 16.622 1.00 14.00 N
ATOM 23 C4 A B 48 1.782 -37.632 17.720 1.00 13.05 C
ATOM 24 P A B 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 25 OP1 A B 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 26 OP2 A B 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 27 O5' A B 49 0.662 -30.509 17.263 1.00 20.31 O
TER
Atoms:
OP1: (-2.792,-33.913,22.198)
OP2: (-3.081,-35.235,20.019)
C3': (1.020,-37.180,22.437)
C1': (0.266,-39.421,22.255)
C5': (-1.277,-36.345,23.223)
O6: (-1.087,-41.885,17.008)
O4': (-0.737,-38.672,22.911)
C8: (-1.008,-38.979,20.108)
C2: (0.876,-42.884,19.767)
C6: (-0.545,-41.804,18.102)
C5: (-0.608,-40.760,19.031)
C4: (0.071,-40.885,20.218)
P: (-2.902,-35.217,21.487)
C4': (-0.202,-37.394,23.314)
C2': (1.549,-38.599,22.265)
O2': (2.312,-39.009,23.379)
N1: (0.240,-42.849,18.559)
N2: (1.565,-43.997,20.033)
N3: (0.830,-41.908,20.650)
N7: (-1.282,-39.552,18.973)
N9: (-0.201,-39.742,20.914)
O5': (-1.633,-36.109,21.851)
O3': (1.996,-36.410,23.124)
OP2: (-3.081,-35.235,20.019)
C3': (1.020,-37.180,22.437)
C1': (0.266,-39.421,22.255)
C5': (-1.277,-36.345,23.223)
O6: (-1.087,-41.885,17.008)
O4': (-0.737,-38.672,22.911)
C8: (-1.008,-38.979,20.108)
C2: (0.876,-42.884,19.767)
C6: (-0.545,-41.804,18.102)
C5: (-0.608,-40.760,19.031)
C4: (0.071,-40.885,20.218)
P: (-2.902,-35.217,21.487)
C4': (-0.202,-37.394,23.314)
C2': (1.549,-38.599,22.265)
O2': (2.312,-39.009,23.379)
N1: (0.240,-42.849,18.559)
N2: (1.565,-43.997,20.033)
N3: (0.830,-41.908,20.650)
N7: (-1.282,-39.552,18.973)
N9: (-0.201,-39.742,20.914)
O5': (-1.633,-36.109,21.851)
O3': (1.996,-36.410,23.124)
OP1: (3.379,-34.383,23.388)
OP2: (0.837,-34.302,23.683)
C3': (0.146,-33.406,19.174)
C1': (1.392,-35.180,18.234)
C5': (2.053,-33.202,20.862)
O4': (2.318,-34.228,18.715)
C8: (2.789,-36.874,19.504)
O2': (-1.001,-35.293,18.112)
C6: (2.584,-39.857,17.688)
C5: (2.565,-38.603,18.302)
C4: (1.782,-37.632,17.720)
P: (2.029,-34.816,22.966)
C4': (1.629,-33.167,19.409)
C2': (0.072,-34.912,18.949)
C2: (1.118,-38.994,16.134)
N1: (1.831,-40.026,16.580)
N3: (1.023,-37.765,16.622)
N6: (3.305,-40.885,18.139)
N7: (3.194,-38.115,19.434)
N9: (1.952,-36.508,18.483)
O5': (1.862,-34.536,21.405)
O3': (-0.207,-32.760,17.954)
OP2: (0.837,-34.302,23.683)
C3': (0.146,-33.406,19.174)
C1': (1.392,-35.180,18.234)
C5': (2.053,-33.202,20.862)
O4': (2.318,-34.228,18.715)
C8: (2.789,-36.874,19.504)
O2': (-1.001,-35.293,18.112)
C6: (2.584,-39.857,17.688)
C5: (2.565,-38.603,18.302)
C4: (1.782,-37.632,17.720)
P: (2.029,-34.816,22.966)
C4': (1.629,-33.167,19.409)
C2': (0.072,-34.912,18.949)
C2: (1.118,-38.994,16.134)
N1: (1.831,-40.026,16.580)
N3: (1.023,-37.765,16.622)
N6: (3.305,-40.885,18.139)
N7: (3.194,-38.115,19.434)
N9: (1.952,-36.508,18.483)
O5': (1.862,-34.536,21.405)
O3': (-0.207,-32.760,17.954)
Image (generated by PyMOL):