Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X59:X11
Extra
PDB:
ATOM 1 O3' U A 58 31.697 -6.686 -2.522 1.00 54.99 O
ATOM 2 P G A 59 30.268 -6.737 -1.815 1.00 57.54 P
ATOM 3 OP1 G A 59 29.817 -5.331 -1.706 1.00 58.17 O
ATOM 4 OP2 G A 59 30.321 -7.535 -0.573 1.00 55.96 O
ATOM 5 O5' G A 59 29.346 -7.452 -2.924 1.00 57.82 O
ATOM 6 C5' G A 59 29.024 -6.747 -4.158 1.00 57.32 C
ATOM 7 C4' G A 59 28.361 -7.654 -5.186 1.00 57.46 C
ATOM 8 O4' G A 59 29.236 -8.772 -5.492 1.00 54.71 O
ATOM 9 C3' G A 59 27.061 -8.322 -4.753 1.00 57.76 C
ATOM 10 O3' G A 59 25.939 -7.437 -4.873 1.00 60.70 O
ATOM 11 C2' G A 59 27.008 -9.523 -5.701 1.00 56.77 C
ATOM 12 O2' G A 59 26.481 -9.237 -6.983 1.00 56.15 O
ATOM 13 C1' G A 59 28.479 -9.927 -5.802 1.00 54.28 C
ATOM 14 N9 G A 59 28.864 -11.006 -4.874 1.00 53.29 N
ATOM 15 C8 G A 59 29.456 -10.857 -3.638 1.00 53.62 C
ATOM 16 N7 G A 59 29.688 -11.986 -2.998 1.00 53.38 N
ATOM 17 C5 G A 59 29.222 -12.944 -3.880 1.00 53.61 C
ATOM 18 C6 G A 59 29.206 -14.343 -3.731 1.00 52.68 C
ATOM 19 O6 G A 59 29.620 -14.999 -2.779 1.00 52.85 O
ATOM 20 N1 G A 59 28.652 -14.983 -4.832 1.00 53.39 N
ATOM 21 C2 G A 59 28.161 -14.335 -5.946 1.00 54.00 C
ATOM 22 N2 G A 59 27.647 -15.142 -6.885 1.00 53.53 N
ATOM 23 N3 G A 59 28.155 -13.005 -6.112 1.00 53.40 N
ATOM 24 C4 G A 59 28.710 -12.365 -5.042 1.00 53.86 C
ATOM 25 P A A 60 24.787 -7.512 -3.767 1.00 63.23 P
ATOM 26 OP1 A A 60 24.075 -6.228 -3.656 1.00 64.82 O
ATOM 27 OP2 A A 60 25.372 -8.087 -2.532 1.00 65.22 O
ATOM 28 O5' A A 60 23.817 -8.594 -4.434 1.00 63.56 O
TER
ATOM 1 O3' A B 10 29.300 -15.748 4.808 1.00 53.66 O
ATOM 2 P A B 11 28.596 -15.607 3.365 1.00 52.52 P
ATOM 3 OP1 A B 11 29.445 -14.737 2.524 1.00 54.12 O
ATOM 4 OP2 A B 11 27.204 -15.207 3.630 1.00 52.44 O
ATOM 5 O5' A B 11 28.570 -17.019 2.644 1.00 52.84 O
ATOM 6 C5' A B 11 27.581 -17.992 2.911 1.00 53.70 C
ATOM 7 C4' A B 11 26.905 -18.519 1.658 1.00 53.76 C
ATOM 8 O4' A B 11 25.950 -17.537 1.221 1.00 54.58 O
ATOM 9 C3' A B 11 27.762 -18.748 0.423 1.00 53.03 C
ATOM 10 O3' A B 11 28.368 -20.002 0.482 1.00 51.73 O
ATOM 11 C2' A B 11 26.668 -18.787 -0.635 1.00 55.06 C
ATOM 12 O2' A B 11 25.960 -20.001 -0.662 1.00 53.72 O
ATOM 13 C1' A B 11 25.747 -17.688 -0.162 1.00 53.93 C
ATOM 14 N9 A B 11 25.995 -16.392 -0.780 1.00 55.23 N
ATOM 15 C8 A B 11 26.545 -15.270 -0.221 1.00 54.81 C
ATOM 16 N7 A B 11 26.591 -14.251 -1.051 1.00 54.85 N
ATOM 17 C5 A B 11 26.045 -14.751 -2.217 1.00 55.04 C
ATOM 18 C6 A B 11 25.803 -14.183 -3.485 1.00 54.86 C
ATOM 19 N6 A B 11 26.097 -12.933 -3.802 1.00 55.51 N
ATOM 20 N1 A B 11 25.237 -14.962 -4.419 1.00 55.26 N
ATOM 21 C2 A B 11 24.923 -16.230 -4.132 1.00 53.24 C
ATOM 22 N3 A B 11 25.103 -16.865 -2.972 1.00 55.65 N
ATOM 23 C4 A B 11 25.665 -16.059 -2.063 1.00 53.40 C
ATOM 24 P U B 12 29.837 -20.408 0.006 1.00 56.25 P
ATOM 25 OP1 U B 12 30.526 -19.266 -0.607 1.00 53.42 O
ATOM 26 OP2 U B 12 29.707 -21.627 -0.822 1.00 57.37 O
ATOM 27 O5' U B 12 30.558 -20.818 1.361 1.00 53.38 O
TER
ATOM 2 P G A 59 30.268 -6.737 -1.815 1.00 57.54 P
ATOM 3 OP1 G A 59 29.817 -5.331 -1.706 1.00 58.17 O
ATOM 4 OP2 G A 59 30.321 -7.535 -0.573 1.00 55.96 O
ATOM 5 O5' G A 59 29.346 -7.452 -2.924 1.00 57.82 O
ATOM 6 C5' G A 59 29.024 -6.747 -4.158 1.00 57.32 C
ATOM 7 C4' G A 59 28.361 -7.654 -5.186 1.00 57.46 C
ATOM 8 O4' G A 59 29.236 -8.772 -5.492 1.00 54.71 O
ATOM 9 C3' G A 59 27.061 -8.322 -4.753 1.00 57.76 C
ATOM 10 O3' G A 59 25.939 -7.437 -4.873 1.00 60.70 O
ATOM 11 C2' G A 59 27.008 -9.523 -5.701 1.00 56.77 C
ATOM 12 O2' G A 59 26.481 -9.237 -6.983 1.00 56.15 O
ATOM 13 C1' G A 59 28.479 -9.927 -5.802 1.00 54.28 C
ATOM 14 N9 G A 59 28.864 -11.006 -4.874 1.00 53.29 N
ATOM 15 C8 G A 59 29.456 -10.857 -3.638 1.00 53.62 C
ATOM 16 N7 G A 59 29.688 -11.986 -2.998 1.00 53.38 N
ATOM 17 C5 G A 59 29.222 -12.944 -3.880 1.00 53.61 C
ATOM 18 C6 G A 59 29.206 -14.343 -3.731 1.00 52.68 C
ATOM 19 O6 G A 59 29.620 -14.999 -2.779 1.00 52.85 O
ATOM 20 N1 G A 59 28.652 -14.983 -4.832 1.00 53.39 N
ATOM 21 C2 G A 59 28.161 -14.335 -5.946 1.00 54.00 C
ATOM 22 N2 G A 59 27.647 -15.142 -6.885 1.00 53.53 N
ATOM 23 N3 G A 59 28.155 -13.005 -6.112 1.00 53.40 N
ATOM 24 C4 G A 59 28.710 -12.365 -5.042 1.00 53.86 C
ATOM 25 P A A 60 24.787 -7.512 -3.767 1.00 63.23 P
ATOM 26 OP1 A A 60 24.075 -6.228 -3.656 1.00 64.82 O
ATOM 27 OP2 A A 60 25.372 -8.087 -2.532 1.00 65.22 O
ATOM 28 O5' A A 60 23.817 -8.594 -4.434 1.00 63.56 O
TER
ATOM 1 O3' A B 10 29.300 -15.748 4.808 1.00 53.66 O
ATOM 2 P A B 11 28.596 -15.607 3.365 1.00 52.52 P
ATOM 3 OP1 A B 11 29.445 -14.737 2.524 1.00 54.12 O
ATOM 4 OP2 A B 11 27.204 -15.207 3.630 1.00 52.44 O
ATOM 5 O5' A B 11 28.570 -17.019 2.644 1.00 52.84 O
ATOM 6 C5' A B 11 27.581 -17.992 2.911 1.00 53.70 C
ATOM 7 C4' A B 11 26.905 -18.519 1.658 1.00 53.76 C
ATOM 8 O4' A B 11 25.950 -17.537 1.221 1.00 54.58 O
ATOM 9 C3' A B 11 27.762 -18.748 0.423 1.00 53.03 C
ATOM 10 O3' A B 11 28.368 -20.002 0.482 1.00 51.73 O
ATOM 11 C2' A B 11 26.668 -18.787 -0.635 1.00 55.06 C
ATOM 12 O2' A B 11 25.960 -20.001 -0.662 1.00 53.72 O
ATOM 13 C1' A B 11 25.747 -17.688 -0.162 1.00 53.93 C
ATOM 14 N9 A B 11 25.995 -16.392 -0.780 1.00 55.23 N
ATOM 15 C8 A B 11 26.545 -15.270 -0.221 1.00 54.81 C
ATOM 16 N7 A B 11 26.591 -14.251 -1.051 1.00 54.85 N
ATOM 17 C5 A B 11 26.045 -14.751 -2.217 1.00 55.04 C
ATOM 18 C6 A B 11 25.803 -14.183 -3.485 1.00 54.86 C
ATOM 19 N6 A B 11 26.097 -12.933 -3.802 1.00 55.51 N
ATOM 20 N1 A B 11 25.237 -14.962 -4.419 1.00 55.26 N
ATOM 21 C2 A B 11 24.923 -16.230 -4.132 1.00 53.24 C
ATOM 22 N3 A B 11 25.103 -16.865 -2.972 1.00 55.65 N
ATOM 23 C4 A B 11 25.665 -16.059 -2.063 1.00 53.40 C
ATOM 24 P U B 12 29.837 -20.408 0.006 1.00 56.25 P
ATOM 25 OP1 U B 12 30.526 -19.266 -0.607 1.00 53.42 O
ATOM 26 OP2 U B 12 29.707 -21.627 -0.822 1.00 57.37 O
ATOM 27 O5' U B 12 30.558 -20.818 1.361 1.00 53.38 O
TER
Atoms:
OP1: (29.817,-5.331,-1.706)
OP2: (30.321,-7.535,-0.573)
C3': (27.061,-8.322,-4.753)
C1': (28.479,-9.927,-5.802)
C5': (29.024,-6.747,-4.158)
O6: (29.620,-14.999,-2.779)
O4': (29.236,-8.772,-5.492)
C8: (29.456,-10.857,-3.638)
C2: (28.161,-14.335,-5.946)
C6: (29.206,-14.343,-3.731)
C5: (29.222,-12.944,-3.880)
C4: (28.710,-12.365,-5.042)
P: (30.268,-6.737,-1.815)
C4': (28.361,-7.654,-5.186)
C2': (27.008,-9.523,-5.701)
O2': (26.481,-9.237,-6.983)
N1: (28.652,-14.983,-4.832)
N2: (27.647,-15.142,-6.885)
N3: (28.155,-13.005,-6.112)
N7: (29.688,-11.986,-2.998)
N9: (28.864,-11.006,-4.874)
O5': (29.346,-7.452,-2.924)
O3': (25.939,-7.437,-4.873)
OP2: (30.321,-7.535,-0.573)
C3': (27.061,-8.322,-4.753)
C1': (28.479,-9.927,-5.802)
C5': (29.024,-6.747,-4.158)
O6: (29.620,-14.999,-2.779)
O4': (29.236,-8.772,-5.492)
C8: (29.456,-10.857,-3.638)
C2: (28.161,-14.335,-5.946)
C6: (29.206,-14.343,-3.731)
C5: (29.222,-12.944,-3.880)
C4: (28.710,-12.365,-5.042)
P: (30.268,-6.737,-1.815)
C4': (28.361,-7.654,-5.186)
C2': (27.008,-9.523,-5.701)
O2': (26.481,-9.237,-6.983)
N1: (28.652,-14.983,-4.832)
N2: (27.647,-15.142,-6.885)
N3: (28.155,-13.005,-6.112)
N7: (29.688,-11.986,-2.998)
N9: (28.864,-11.006,-4.874)
O5': (29.346,-7.452,-2.924)
O3': (25.939,-7.437,-4.873)
OP1: (29.445,-14.737,2.524)
OP2: (27.204,-15.207,3.630)
C3': (27.762,-18.748,0.423)
C1': (25.747,-17.688,-0.162)
C5': (27.581,-17.992,2.911)
O4': (25.950,-17.537,1.221)
C8: (26.545,-15.270,-0.221)
O2': (25.960,-20.001,-0.662)
C6: (25.803,-14.183,-3.485)
C5: (26.045,-14.751,-2.217)
C4: (25.665,-16.059,-2.063)
P: (28.596,-15.607,3.365)
C4': (26.905,-18.519,1.658)
C2': (26.668,-18.787,-0.635)
C2: (24.923,-16.230,-4.132)
N1: (25.237,-14.962,-4.419)
N3: (25.103,-16.865,-2.972)
N6: (26.097,-12.933,-3.802)
N7: (26.591,-14.251,-1.051)
N9: (25.995,-16.392,-0.780)
O5': (28.570,-17.019,2.644)
O3': (28.368,-20.002,0.482)
OP2: (27.204,-15.207,3.630)
C3': (27.762,-18.748,0.423)
C1': (25.747,-17.688,-0.162)
C5': (27.581,-17.992,2.911)
O4': (25.950,-17.537,1.221)
C8: (26.545,-15.270,-0.221)
O2': (25.960,-20.001,-0.662)
C6: (25.803,-14.183,-3.485)
C5: (26.045,-14.751,-2.217)
C4: (25.665,-16.059,-2.063)
P: (28.596,-15.607,3.365)
C4': (26.905,-18.519,1.658)
C2': (26.668,-18.787,-0.635)
C2: (24.923,-16.230,-4.132)
N1: (25.237,-14.962,-4.419)
N3: (25.103,-16.865,-2.972)
N6: (26.097,-12.933,-3.802)
N7: (26.591,-14.251,-1.051)
N9: (25.995,-16.392,-0.780)
O5': (28.570,-17.019,2.644)
O3': (28.368,-20.002,0.482)
Image (generated by PyMOL):