Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B47:B48
Extra
PDB:
ATOM 1 O3' U A 46 -3.852 -19.334 7.952 1.00 19.20 O
ATOM 2 P G A 47 -2.569 -19.980 8.651 1.00 19.03 P
ATOM 3 OP1 G A 47 -2.265 -21.240 7.927 1.00 20.26 O
ATOM 4 OP2 G A 47 -2.837 -20.019 10.090 1.00 19.98 O
ATOM 5 O5' G A 47 -1.403 -18.927 8.388 1.00 21.02 O
ATOM 6 C5' G A 47 -0.837 -18.758 7.075 1.00 21.82 C
ATOM 7 C4' G A 47 0.152 -17.624 7.075 1.00 22.56 C
ATOM 8 O4' G A 47 -0.545 -16.409 7.438 1.00 24.01 O
ATOM 9 C3' G A 47 1.300 -17.720 8.071 1.00 23.01 C
ATOM 10 O3' G A 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 11 C2' G A 47 1.676 -16.256 8.260 1.00 23.64 C
ATOM 12 O2' G A 47 2.474 -15.794 7.183 1.00 24.50 O
ATOM 13 C1' G A 47 0.316 -15.563 8.175 1.00 23.43 C
ATOM 14 N9 G A 47 -0.296 -15.312 9.475 1.00 23.53 N
ATOM 15 C8 G A 47 -1.032 -16.197 10.233 1.00 23.78 C
ATOM 16 N7 G A 47 -1.470 -15.677 11.347 1.00 22.95 N
ATOM 17 C5 G A 47 -0.991 -14.375 11.326 1.00 24.24 C
ATOM 18 C6 G A 47 -1.152 -13.333 12.258 1.00 25.62 C
ATOM 19 O6 G A 47 -1.766 -13.349 13.321 1.00 28.13 O
ATOM 20 N1 G A 47 -0.509 -12.175 11.849 1.00 25.20 N
ATOM 21 C2 G A 47 0.200 -12.037 10.688 1.00 25.17 C
ATOM 22 N2 G A 47 0.750 -10.830 10.474 1.00 25.88 N
ATOM 23 N3 G A 47 0.359 -13.003 9.802 1.00 24.24 N
ATOM 24 C4 G A 47 -0.260 -14.136 10.182 1.00 23.65 C
ATOM 25 P A A 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 26 OP1 A A 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 27 OP2 A A 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 28 O5' A A 48 2.158 -20.288 9.232 1.00 22.97 O
TER
ATOM 1 O3' G B 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 2 P A B 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 3 OP1 A B 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 4 OP2 A B 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 5 O5' A B 48 2.158 -20.288 9.232 1.00 22.97 O
ATOM 6 C5' A B 48 2.474 -21.562 9.855 1.00 21.01 C
ATOM 7 C4' A B 48 1.832 -21.647 11.229 1.00 20.49 C
ATOM 8 O4' A B 48 2.317 -20.534 12.020 1.00 20.26 O
ATOM 9 C3' A B 48 0.309 -21.554 11.249 1.00 19.42 C
ATOM 10 O3' A B 48 -0.183 -22.233 12.404 1.00 19.57 O
ATOM 11 C2' A B 48 0.067 -20.068 11.484 1.00 19.59 C
ATOM 12 O2' A B 48 -1.154 -19.803 12.149 1.00 20.21 O
ATOM 13 C1' A B 48 1.242 -19.705 12.390 1.00 19.63 C
ATOM 14 N9 A B 48 1.687 -18.322 12.249 1.00 19.27 N
ATOM 15 C8 A B 48 2.572 -17.827 11.331 1.00 20.22 C
ATOM 16 N7 A B 48 2.797 -16.546 11.455 1.00 21.33 N
ATOM 17 C5 A B 48 2.003 -16.171 12.526 1.00 20.11 C
ATOM 18 C6 A B 48 1.792 -14.936 13.153 1.00 21.10 C
ATOM 19 N6 A B 48 2.390 -13.801 12.779 1.00 20.49 N
ATOM 20 N1 A B 48 0.930 -14.902 14.192 1.00 22.47 N
ATOM 21 C2 A B 48 0.330 -16.039 14.564 1.00 22.22 C
ATOM 22 N3 A B 48 0.446 -17.258 14.049 1.00 20.81 N
ATOM 23 C4 A B 48 1.309 -17.254 13.021 1.00 19.19 C
ATOM 24 P A B 49 -0.441 -23.819 12.382 1.00 18.41 P
ATOM 25 OP1 A B 49 -0.280 -24.380 11.022 1.00 18.60 O
ATOM 26 OP2 A B 49 -1.712 -24.015 13.095 1.00 18.31 O
ATOM 27 O5' A B 49 0.707 -24.369 13.340 1.00 18.61 O
TER
ATOM 2 P G A 47 -2.569 -19.980 8.651 1.00 19.03 P
ATOM 3 OP1 G A 47 -2.265 -21.240 7.927 1.00 20.26 O
ATOM 4 OP2 G A 47 -2.837 -20.019 10.090 1.00 19.98 O
ATOM 5 O5' G A 47 -1.403 -18.927 8.388 1.00 21.02 O
ATOM 6 C5' G A 47 -0.837 -18.758 7.075 1.00 21.82 C
ATOM 7 C4' G A 47 0.152 -17.624 7.075 1.00 22.56 C
ATOM 8 O4' G A 47 -0.545 -16.409 7.438 1.00 24.01 O
ATOM 9 C3' G A 47 1.300 -17.720 8.071 1.00 23.01 C
ATOM 10 O3' G A 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 11 C2' G A 47 1.676 -16.256 8.260 1.00 23.64 C
ATOM 12 O2' G A 47 2.474 -15.794 7.183 1.00 24.50 O
ATOM 13 C1' G A 47 0.316 -15.563 8.175 1.00 23.43 C
ATOM 14 N9 G A 47 -0.296 -15.312 9.475 1.00 23.53 N
ATOM 15 C8 G A 47 -1.032 -16.197 10.233 1.00 23.78 C
ATOM 16 N7 G A 47 -1.470 -15.677 11.347 1.00 22.95 N
ATOM 17 C5 G A 47 -0.991 -14.375 11.326 1.00 24.24 C
ATOM 18 C6 G A 47 -1.152 -13.333 12.258 1.00 25.62 C
ATOM 19 O6 G A 47 -1.766 -13.349 13.321 1.00 28.13 O
ATOM 20 N1 G A 47 -0.509 -12.175 11.849 1.00 25.20 N
ATOM 21 C2 G A 47 0.200 -12.037 10.688 1.00 25.17 C
ATOM 22 N2 G A 47 0.750 -10.830 10.474 1.00 25.88 N
ATOM 23 N3 G A 47 0.359 -13.003 9.802 1.00 24.24 N
ATOM 24 C4 G A 47 -0.260 -14.136 10.182 1.00 23.65 C
ATOM 25 P A A 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 26 OP1 A A 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 27 OP2 A A 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 28 O5' A A 48 2.158 -20.288 9.232 1.00 22.97 O
TER
ATOM 1 O3' G B 47 2.413 -18.409 7.522 1.00 22.97 O
ATOM 2 P A B 48 2.562 -19.994 7.720 1.00 23.44 P
ATOM 3 OP1 A B 48 3.997 -20.309 7.573 1.00 24.71 O
ATOM 4 OP2 A B 48 1.568 -20.637 6.823 1.00 23.96 O
ATOM 5 O5' A B 48 2.158 -20.288 9.232 1.00 22.97 O
ATOM 6 C5' A B 48 2.474 -21.562 9.855 1.00 21.01 C
ATOM 7 C4' A B 48 1.832 -21.647 11.229 1.00 20.49 C
ATOM 8 O4' A B 48 2.317 -20.534 12.020 1.00 20.26 O
ATOM 9 C3' A B 48 0.309 -21.554 11.249 1.00 19.42 C
ATOM 10 O3' A B 48 -0.183 -22.233 12.404 1.00 19.57 O
ATOM 11 C2' A B 48 0.067 -20.068 11.484 1.00 19.59 C
ATOM 12 O2' A B 48 -1.154 -19.803 12.149 1.00 20.21 O
ATOM 13 C1' A B 48 1.242 -19.705 12.390 1.00 19.63 C
ATOM 14 N9 A B 48 1.687 -18.322 12.249 1.00 19.27 N
ATOM 15 C8 A B 48 2.572 -17.827 11.331 1.00 20.22 C
ATOM 16 N7 A B 48 2.797 -16.546 11.455 1.00 21.33 N
ATOM 17 C5 A B 48 2.003 -16.171 12.526 1.00 20.11 C
ATOM 18 C6 A B 48 1.792 -14.936 13.153 1.00 21.10 C
ATOM 19 N6 A B 48 2.390 -13.801 12.779 1.00 20.49 N
ATOM 20 N1 A B 48 0.930 -14.902 14.192 1.00 22.47 N
ATOM 21 C2 A B 48 0.330 -16.039 14.564 1.00 22.22 C
ATOM 22 N3 A B 48 0.446 -17.258 14.049 1.00 20.81 N
ATOM 23 C4 A B 48 1.309 -17.254 13.021 1.00 19.19 C
ATOM 24 P A B 49 -0.441 -23.819 12.382 1.00 18.41 P
ATOM 25 OP1 A B 49 -0.280 -24.380 11.022 1.00 18.60 O
ATOM 26 OP2 A B 49 -1.712 -24.015 13.095 1.00 18.31 O
ATOM 27 O5' A B 49 0.707 -24.369 13.340 1.00 18.61 O
TER
Atoms:
OP1: (-2.265,-21.240,7.927)
OP2: (-2.837,-20.019,10.090)
C3': (1.300,-17.720,8.071)
C1': (0.316,-15.563,8.175)
C5': (-0.837,-18.758,7.075)
O6: (-1.766,-13.349,13.321)
O4': (-0.545,-16.409,7.438)
C8: (-1.032,-16.197,10.233)
C2: (0.200,-12.037,10.688)
C6: (-1.152,-13.333,12.258)
C5: (-0.991,-14.375,11.326)
C4: (-0.260,-14.136,10.182)
P: (-2.569,-19.980,8.651)
C4': (0.152,-17.624,7.075)
C2': (1.676,-16.256,8.260)
O2': (2.474,-15.794,7.183)
N1: (-0.509,-12.175,11.849)
N2: (0.750,-10.830,10.474)
N3: (0.359,-13.003,9.802)
N7: (-1.470,-15.677,11.347)
N9: (-0.296,-15.312,9.475)
O5': (-1.403,-18.927,8.388)
O3': (2.413,-18.409,7.522)
OP2: (-2.837,-20.019,10.090)
C3': (1.300,-17.720,8.071)
C1': (0.316,-15.563,8.175)
C5': (-0.837,-18.758,7.075)
O6: (-1.766,-13.349,13.321)
O4': (-0.545,-16.409,7.438)
C8: (-1.032,-16.197,10.233)
C2: (0.200,-12.037,10.688)
C6: (-1.152,-13.333,12.258)
C5: (-0.991,-14.375,11.326)
C4: (-0.260,-14.136,10.182)
P: (-2.569,-19.980,8.651)
C4': (0.152,-17.624,7.075)
C2': (1.676,-16.256,8.260)
O2': (2.474,-15.794,7.183)
N1: (-0.509,-12.175,11.849)
N2: (0.750,-10.830,10.474)
N3: (0.359,-13.003,9.802)
N7: (-1.470,-15.677,11.347)
N9: (-0.296,-15.312,9.475)
O5': (-1.403,-18.927,8.388)
O3': (2.413,-18.409,7.522)
OP1: (3.997,-20.309,7.573)
OP2: (1.568,-20.637,6.823)
C3': (0.309,-21.554,11.249)
C1': (1.242,-19.705,12.390)
C5': (2.474,-21.562,9.855)
O4': (2.317,-20.534,12.020)
C8: (2.572,-17.827,11.331)
O2': (-1.154,-19.803,12.149)
C6: (1.792,-14.936,13.153)
C5: (2.003,-16.171,12.526)
C4: (1.309,-17.254,13.021)
P: (2.562,-19.994,7.720)
C4': (1.832,-21.647,11.229)
C2': (0.067,-20.068,11.484)
C2: (0.330,-16.039,14.564)
N1: (0.930,-14.902,14.192)
N3: (0.446,-17.258,14.049)
N6: (2.390,-13.801,12.779)
N7: (2.797,-16.546,11.455)
N9: (1.687,-18.322,12.249)
O5': (2.158,-20.288,9.232)
O3': (-0.183,-22.233,12.404)
OP2: (1.568,-20.637,6.823)
C3': (0.309,-21.554,11.249)
C1': (1.242,-19.705,12.390)
C5': (2.474,-21.562,9.855)
O4': (2.317,-20.534,12.020)
C8: (2.572,-17.827,11.331)
O2': (-1.154,-19.803,12.149)
C6: (1.792,-14.936,13.153)
C5: (2.003,-16.171,12.526)
C4: (1.309,-17.254,13.021)
P: (2.562,-19.994,7.720)
C4': (1.832,-21.647,11.229)
C2': (0.067,-20.068,11.484)
C2: (0.330,-16.039,14.564)
N1: (0.930,-14.902,14.192)
N3: (0.446,-17.258,14.049)
N6: (2.390,-13.801,12.779)
N7: (2.797,-16.546,11.455)
N9: (1.687,-18.322,12.249)
O5': (2.158,-20.288,9.232)
O3': (-0.183,-22.233,12.404)
Image (generated by PyMOL):