ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A14:A139

Extra

PDB:
ATOM 1 O3' U A 13 13.431 34.142 32.217 1.00 20.46 O
ATOM 2 P G A 14 14.792 34.659 31.564 1.00 21.12 P
ATOM 3 OP1 G A 14 15.805 34.200 32.548 1.00 23.27 O
ATOM 4 OP2 G A 14 14.681 36.103 31.262 1.00 17.31 O
ATOM 5 O5' G A 14 14.922 33.902 30.158 1.00 19.39 O
ATOM 6 C5' G A 14 15.069 32.492 29.994 1.00 20.68 C
ATOM 7 C4' G A 14 15.356 32.186 28.542 1.00 21.78 C
ATOM 8 O4' G A 14 14.212 32.642 27.767 1.00 20.38 O
ATOM 9 C3' G A 14 16.564 32.941 27.992 1.00 20.45 C
ATOM 10 O3' G A 14 17.137 32.213 26.912 1.00 21.12 O
ATOM 11 C2' G A 14 15.919 34.212 27.455 1.00 22.42 C
ATOM 12 O2' G A 14 16.661 34.910 26.472 1.00 21.97 O
ATOM 13 C1' G A 14 14.588 33.694 26.916 1.00 16.82 C
ATOM 14 N9 G A 14 13.583 34.758 26.914 1.00 18.71 N
ATOM 15 C8 G A 14 13.362 35.678 27.918 1.00 17.83 C
ATOM 16 N7 G A 14 12.438 36.548 27.613 1.00 19.14 N
ATOM 17 C5 G A 14 12.064 36.214 26.323 1.00 17.31 C
ATOM 18 C6 G A 14 11.112 36.816 25.469 1.00 18.00 C
ATOM 19 O6 G A 14 10.402 37.804 25.698 1.00 16.62 O
ATOM 20 N1 G A 14 11.031 36.141 24.249 1.00 16.08 N
ATOM 21 C2 G A 14 11.785 35.044 23.898 1.00 17.22 C
ATOM 22 N2 G A 14 11.588 34.531 22.673 1.00 15.77 N
ATOM 23 N3 G A 14 12.669 34.482 24.697 1.00 15.63 N
ATOM 24 C4 G A 14 12.763 35.116 25.873 1.00 16.34 C
ATOM 25 P A A 15 18.494 31.396 27.109 1.00 36.46 P
ATOM 26 OP1 A A 15 18.040 30.060 27.581 1.00 29.51 O
ATOM 27 OP2 A A 15 19.444 32.175 27.933 1.00 29.06 O
ATOM 28 O5' A A 15 19.003 31.359 25.584 1.00 24.23 O
TER

ATOM 1 O3' U B 138 11.127 43.838 21.738 1.00 17.72 O
ATOM 2 P A B 139 10.023 42.840 22.325 1.00 22.21 P
ATOM 3 OP1 A B 139 8.801 43.306 21.612 1.00 20.18 O
ATOM 4 OP2 A B 139 10.123 42.830 23.810 1.00 21.10 O
ATOM 5 O5' A B 139 10.438 41.404 21.813 1.00 20.81 O
ATOM 6 C5' A B 139 10.473 41.102 20.431 1.00 18.78 C
ATOM 7 C4' A B 139 11.189 39.797 20.207 1.00 17.96 C
ATOM 8 O4' A B 139 12.579 39.923 20.614 1.00 17.24 O
ATOM 9 C3' A B 139 10.668 38.619 21.018 1.00 17.76 C
ATOM 10 O3' A B 139 9.497 38.041 20.461 1.00 17.09 O
ATOM 11 C2' A B 139 11.878 37.701 21.051 1.00 15.93 C
ATOM 12 O2' A B 139 12.047 37.049 19.806 1.00 17.32 O
ATOM 13 C1' A B 139 13.014 38.710 21.196 1.00 15.64 C
ATOM 14 N9 A B 139 13.296 38.955 22.620 1.00 18.76 N
ATOM 15 C8 A B 139 12.869 39.995 23.409 1.00 19.35 C
ATOM 16 N7 A B 139 13.309 39.908 24.650 1.00 17.87 N
ATOM 17 C5 A B 139 14.054 38.743 24.667 1.00 16.87 C
ATOM 18 C6 A B 139 14.792 38.086 25.671 1.00 19.31 C
ATOM 19 N6 A B 139 14.902 38.524 26.942 1.00 17.31 N
ATOM 20 N1 A B 139 15.424 36.943 25.321 1.00 16.92 N
ATOM 21 C2 A B 139 15.331 36.476 24.068 1.00 18.82 C
ATOM 22 N3 A B 139 14.669 37.013 23.039 1.00 17.70 N
ATOM 23 C4 A B 139 14.054 38.146 23.416 1.00 16.35 C
ATOM 24 P A B 140 8.381 37.321 21.397 1.00 16.93 P
ATOM 25 OP1 A B 140 7.684 38.328 22.220 1.00 17.14 O
ATOM 26 OP2 A B 140 9.143 36.281 22.077 1.00 17.22 O
ATOM 27 O5' A B 140 7.386 36.772 20.283 1.00 17.60 O
TER

Atoms:
OP1: (15.805,34.200,32.548)
OP2: (14.681,36.103,31.262)
C3': (16.564,32.941,27.992)
C1': (14.588,33.694,26.916)
C5': (15.069,32.492,29.994)
O6: (10.402,37.804,25.698)
O4': (14.212,32.642,27.767)
C8: (13.362,35.678,27.918)
C2: (11.785,35.044,23.898)
C6: (11.112,36.816,25.469)
C5: (12.064,36.214,26.323)
C4: (12.763,35.116,25.873)
P: (14.792,34.659,31.564)
C4': (15.356,32.186,28.542)
C2': (15.919,34.212,27.455)
O2': (16.661,34.910,26.472)
N1: (11.031,36.141,24.249)
N2: (11.588,34.531,22.673)
N3: (12.669,34.482,24.697)
N7: (12.438,36.548,27.613)
N9: (13.583,34.758,26.914)
O5': (14.922,33.902,30.158)
O3': (17.137,32.213,26.912)
OP1: (8.801,43.306,21.612)
OP2: (10.123,42.830,23.810)
C3': (10.668,38.619,21.018)
C1': (13.014,38.710,21.196)
C5': (10.473,41.102,20.431)
O4': (12.579,39.923,20.614)
C8: (12.869,39.995,23.409)
O2': (12.047,37.049,19.806)
C6: (14.792,38.086,25.671)
C5: (14.054,38.743,24.667)
C4: (14.054,38.146,23.416)
P: (10.023,42.840,22.325)
C4': (11.189,39.797,20.207)
C2': (11.878,37.701,21.051)
C2: (15.331,36.476,24.068)
N1: (15.424,36.943,25.321)
N3: (14.669,37.013,23.039)
N6: (14.902,38.524,26.942)
N7: (13.309,39.908,24.650)
N9: (13.296,38.955,22.620)
O5': (10.438,41.404,21.813)
O3': (9.497,38.041,20.461)
Image (generated by PyMOL):
PyMOL image
show in jmol