ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FOZ:D59:D60

Extra

PDB:
ATOM 1 O3' C A 58 -5.950 73.774 -4.140 1.00 43.96 O
ATOM 2 P G A 59 -6.063 72.292 -4.766 1.00 45.00 P
ATOM 3 OP1 G A 59 -7.473 72.083 -5.163 1.00 40.09 O
ATOM 4 OP2 G A 59 -5.415 71.317 -3.861 1.00 44.12 O
ATOM 5 O5' G A 59 -5.189 72.402 -6.097 1.00 42.36 O
ATOM 6 C5' G A 59 -3.855 71.952 -6.095 1.00 43.29 C
ATOM 7 C4' G A 59 -3.092 72.539 -7.269 1.00 44.01 C
ATOM 8 O4' G A 59 -2.090 73.479 -6.804 1.00 43.56 O
ATOM 9 C3' G A 59 -2.351 71.488 -8.084 1.00 45.60 C
ATOM 10 O3' G A 59 -3.130 71.142 -9.228 1.00 44.87 O
ATOM 11 C2' G A 59 -1.008 72.139 -8.414 1.00 46.34 C
ATOM 12 O2' G A 59 -0.990 72.872 -9.625 1.00 42.93 O
ATOM 13 C1' G A 59 -0.801 73.053 -7.211 1.00 45.95 C
ATOM 14 N9 G A 59 -0.091 72.422 -6.089 1.00 48.79 N
ATOM 15 C8 G A 59 -0.576 72.123 -4.832 1.00 50.52 C
ATOM 16 N7 G A 59 0.301 71.573 -4.040 1.00 47.60 N
ATOM 17 C5 G A 59 1.443 71.503 -4.816 1.00 45.16 C
ATOM 18 C6 G A 59 2.718 71.003 -4.493 1.00 45.98 C
ATOM 19 O6 G A 59 3.082 70.507 -3.422 1.00 50.41 O
ATOM 20 N1 G A 59 3.615 71.110 -5.554 1.00 49.15 N
ATOM 21 C2 G A 59 3.314 71.642 -6.786 1.00 47.00 C
ATOM 22 N2 G A 59 4.311 71.662 -7.685 1.00 44.65 N
ATOM 23 N3 G A 59 2.114 72.119 -7.101 1.00 46.83 N
ATOM 24 C4 G A 59 1.228 72.017 -6.075 1.00 47.52 C
ATOM 25 P A A 60 -3.415 69.602 -9.553 1.00 45.42 P
ATOM 26 OP1 A A 60 -4.075 69.546 -10.876 1.00 43.00 O
ATOM 27 OP2 A A 60 -4.089 68.992 -8.384 1.00 36.74 O
ATOM 28 O5' A A 60 -1.920 69.020 -9.663 1.00 44.05 O
TER

ATOM 1 O3' G B 59 -3.130 71.142 -9.228 1.00 44.87 O
ATOM 2 P A B 60 -3.415 69.602 -9.553 1.00 45.42 P
ATOM 3 OP1 A B 60 -4.075 69.546 -10.876 1.00 43.00 O
ATOM 4 OP2 A B 60 -4.089 68.992 -8.384 1.00 36.74 O
ATOM 5 O5' A B 60 -1.920 69.020 -9.663 1.00 44.05 O
ATOM 6 C5' A B 60 -1.037 69.522 -10.673 1.00 42.51 C
ATOM 7 C4' A B 60 0.414 69.096 -10.491 1.00 43.54 C
ATOM 8 O4' A B 60 1.006 69.553 -9.240 1.00 42.42 O
ATOM 9 C3' A B 60 0.686 67.604 -10.369 1.00 44.90 C
ATOM 10 O3' A B 60 0.352 66.834 -11.537 1.00 46.75 O
ATOM 11 C2' A B 60 2.185 67.661 -10.057 1.00 42.85 C
ATOM 12 O2' A B 60 3.028 67.864 -11.177 1.00 37.09 O
ATOM 13 C1' A B 60 2.240 68.849 -9.088 1.00 43.91 C
ATOM 14 N9 A B 60 2.496 68.348 -7.731 1.00 41.34 N
ATOM 15 C8 A B 60 3.724 67.966 -7.255 1.00 38.13 C
ATOM 16 N7 A B 60 3.711 67.526 -6.020 1.00 36.41 N
ATOM 17 C5 A B 60 2.381 67.613 -5.657 1.00 36.01 C
ATOM 18 C6 A B 60 1.708 67.293 -4.460 1.00 36.41 C
ATOM 19 N6 A B 60 2.330 66.809 -3.382 1.00 31.40 N
ATOM 20 N1 A B 60 0.370 67.496 -4.413 1.00 39.84 N
ATOM 21 C2 A B 60 -0.247 67.984 -5.500 1.00 36.87 C
ATOM 22 N3 A B 60 0.280 68.319 -6.680 1.00 35.74 N
ATOM 23 C4 A B 60 1.610 68.109 -6.699 1.00 37.91 C
ATOM 24 P G B 61 0.346 65.226 -11.466 1.00 49.32 P
ATOM 25 OP1 G B 61 -0.254 64.696 -12.711 1.00 47.24 O
ATOM 26 OP2 G B 61 -0.212 64.808 -10.156 1.00 43.28 O
ATOM 27 O5' G B 61 1.915 64.911 -11.490 1.00 47.13 O
TER

Atoms:
OP1: (-7.473,72.083,-5.163)
OP2: (-5.415,71.317,-3.861)
C3': (-2.351,71.488,-8.084)
C1': (-0.801,73.053,-7.211)
C5': (-3.855,71.952,-6.095)
O6: (3.082,70.507,-3.422)
O4': (-2.090,73.479,-6.804)
C8: (-0.576,72.123,-4.832)
C2: (3.314,71.642,-6.786)
C6: (2.718,71.003,-4.493)
C5: (1.443,71.503,-4.816)
C4: (1.228,72.017,-6.075)
P: (-6.063,72.292,-4.766)
C4': (-3.092,72.539,-7.269)
C2': (-1.008,72.139,-8.414)
O2': (-0.990,72.872,-9.625)
N1: (3.615,71.110,-5.554)
N2: (4.311,71.662,-7.685)
N3: (2.114,72.119,-7.101)
N7: (0.301,71.573,-4.040)
N9: (-0.091,72.422,-6.089)
O5': (-5.189,72.402,-6.097)
O3': (-3.130,71.142,-9.228)
OP1: (-4.075,69.546,-10.876)
OP2: (-4.089,68.992,-8.384)
C3': (0.686,67.604,-10.369)
C1': (2.240,68.849,-9.088)
C5': (-1.037,69.522,-10.673)
O4': (1.006,69.553,-9.240)
C8: (3.724,67.966,-7.255)
O2': (3.028,67.864,-11.177)
C6: (1.708,67.293,-4.460)
C5: (2.381,67.613,-5.657)
C4: (1.610,68.109,-6.699)
P: (-3.415,69.602,-9.553)
C4': (0.414,69.096,-10.491)
C2': (2.185,67.661,-10.057)
C2: (-0.247,67.984,-5.500)
N1: (0.370,67.496,-4.413)
N3: (0.280,68.319,-6.680)
N6: (2.330,66.809,-3.382)
N7: (3.711,67.526,-6.020)
N9: (2.496,68.348,-7.731)
O5': (-1.920,69.020,-9.663)
O3': (0.352,66.834,-11.537)
Image (generated by PyMOL):
PyMOL image
show in jmol