Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:046:049
Extra
PDB:
ATOM 1 O3' U A 45 54.761 164.664 36.132 1.00 46.76 O
ATOM 2 P G A 46 53.801 165.600 37.018 1.00 47.51 P
ATOM 3 OP1 G A 46 53.508 166.814 36.217 1.00 48.87 O
ATOM 4 OP2 G A 46 54.384 165.734 38.374 1.00 47.05 O
ATOM 5 O5' G A 46 52.442 164.780 37.112 1.00 47.88 O
ATOM 6 C5' G A 46 51.750 164.409 35.915 1.00 48.25 C
ATOM 7 C4' G A 46 50.266 164.398 36.149 1.00 48.09 C
ATOM 8 O4' G A 46 49.915 163.266 36.992 1.00 50.19 O
ATOM 9 C3' G A 46 49.675 165.629 36.829 1.00 48.47 C
ATOM 10 O3' G A 46 48.391 165.855 36.258 1.00 51.24 O
ATOM 11 C2' G A 46 49.518 165.166 38.276 1.00 46.88 C
ATOM 12 O2' G A 46 48.505 165.864 38.972 1.00 45.32 O
ATOM 13 C1' G A 46 49.106 163.712 38.060 1.00 46.78 C
ATOM 14 N9 G A 46 49.255 162.778 39.175 1.00 46.32 N
ATOM 15 C8 G A 46 49.999 162.933 40.327 1.00 45.93 C
ATOM 16 N7 G A 46 49.920 161.906 41.132 1.00 45.08 N
ATOM 17 C5 G A 46 49.078 161.016 40.473 1.00 45.88 C
ATOM 18 C6 G A 46 48.624 159.722 40.849 1.00 44.72 C
ATOM 19 O6 G A 46 48.894 159.076 41.867 1.00 43.60 O
ATOM 20 N1 G A 46 47.773 159.178 39.888 1.00 45.68 N
ATOM 21 C2 G A 46 47.408 159.793 38.714 1.00 44.61 C
ATOM 22 N2 G A 46 46.568 159.110 37.920 1.00 43.24 N
ATOM 23 N3 G A 46 47.833 160.990 38.346 1.00 44.50 N
ATOM 24 C4 G A 46 48.656 161.542 39.266 1.00 45.90 C
ATOM 25 P C A 47 48.079 167.250 35.526 1.00 51.69 P
ATOM 26 OP1 C A 47 46.687 167.176 35.010 1.00 53.48 O
ATOM 27 OP2 C A 47 49.200 167.509 34.582 1.00 51.33 O
ATOM 28 O5' C A 47 48.107 168.299 36.725 1.00 50.95 O
TER
ATOM 1 O3' C B 48 48.705 169.241 45.518 1.00 66.21 O
ATOM 2 P A B 49 50.089 168.424 45.367 1.00 66.69 P
ATOM 3 OP1 A B 49 50.886 168.659 46.606 1.00 66.85 O
ATOM 4 OP2 A B 49 50.691 168.736 44.036 1.00 67.01 O
ATOM 5 O5' A B 49 49.633 166.898 45.347 1.00 63.48 O
ATOM 6 C5' A B 49 49.064 166.284 46.511 1.00 57.55 C
ATOM 7 C4' A B 49 49.164 164.783 46.412 1.00 54.75 C
ATOM 8 O4' A B 49 48.056 164.256 45.625 1.00 53.66 O
ATOM 9 C3' A B 49 50.441 164.243 45.767 1.00 53.03 C
ATOM 10 O3' A B 49 50.967 163.184 46.553 1.00 52.46 O
ATOM 11 C2' A B 49 49.944 163.706 44.421 1.00 52.86 C
ATOM 12 O2' A B 49 50.711 162.632 43.907 1.00 53.28 O
ATOM 13 C1' A B 49 48.543 163.228 44.791 1.00 51.97 C
ATOM 14 N9 A B 49 47.630 163.057 43.658 1.00 51.18 N
ATOM 15 C8 A B 49 47.365 163.938 42.635 1.00 51.08 C
ATOM 16 N7 A B 49 46.514 163.479 41.747 1.00 50.26 N
ATOM 17 C5 A B 49 46.192 162.214 42.217 1.00 50.18 C
ATOM 18 C6 A B 49 45.346 161.211 41.722 1.00 49.33 C
ATOM 19 N6 A B 49 44.652 161.325 40.589 1.00 49.67 N
ATOM 20 N1 A B 49 45.240 160.068 42.435 1.00 48.73 N
ATOM 21 C2 A B 49 45.948 159.949 43.562 1.00 48.17 C
ATOM 22 N3 A B 49 46.783 160.815 44.127 1.00 48.64 N
ATOM 23 C4 A B 49 46.864 161.943 43.398 1.00 50.40 C
ATOM 24 P A B 50 52.496 163.252 47.051 1.00 51.18 P
ATOM 25 OP1 A B 50 52.598 164.375 48.008 1.00 51.37 O
ATOM 26 OP2 A B 50 53.394 163.214 45.863 1.00 51.86 O
ATOM 27 O5' A B 50 52.670 161.891 47.849 1.00 50.91 O
TER
ATOM 2 P G A 46 53.801 165.600 37.018 1.00 47.51 P
ATOM 3 OP1 G A 46 53.508 166.814 36.217 1.00 48.87 O
ATOM 4 OP2 G A 46 54.384 165.734 38.374 1.00 47.05 O
ATOM 5 O5' G A 46 52.442 164.780 37.112 1.00 47.88 O
ATOM 6 C5' G A 46 51.750 164.409 35.915 1.00 48.25 C
ATOM 7 C4' G A 46 50.266 164.398 36.149 1.00 48.09 C
ATOM 8 O4' G A 46 49.915 163.266 36.992 1.00 50.19 O
ATOM 9 C3' G A 46 49.675 165.629 36.829 1.00 48.47 C
ATOM 10 O3' G A 46 48.391 165.855 36.258 1.00 51.24 O
ATOM 11 C2' G A 46 49.518 165.166 38.276 1.00 46.88 C
ATOM 12 O2' G A 46 48.505 165.864 38.972 1.00 45.32 O
ATOM 13 C1' G A 46 49.106 163.712 38.060 1.00 46.78 C
ATOM 14 N9 G A 46 49.255 162.778 39.175 1.00 46.32 N
ATOM 15 C8 G A 46 49.999 162.933 40.327 1.00 45.93 C
ATOM 16 N7 G A 46 49.920 161.906 41.132 1.00 45.08 N
ATOM 17 C5 G A 46 49.078 161.016 40.473 1.00 45.88 C
ATOM 18 C6 G A 46 48.624 159.722 40.849 1.00 44.72 C
ATOM 19 O6 G A 46 48.894 159.076 41.867 1.00 43.60 O
ATOM 20 N1 G A 46 47.773 159.178 39.888 1.00 45.68 N
ATOM 21 C2 G A 46 47.408 159.793 38.714 1.00 44.61 C
ATOM 22 N2 G A 46 46.568 159.110 37.920 1.00 43.24 N
ATOM 23 N3 G A 46 47.833 160.990 38.346 1.00 44.50 N
ATOM 24 C4 G A 46 48.656 161.542 39.266 1.00 45.90 C
ATOM 25 P C A 47 48.079 167.250 35.526 1.00 51.69 P
ATOM 26 OP1 C A 47 46.687 167.176 35.010 1.00 53.48 O
ATOM 27 OP2 C A 47 49.200 167.509 34.582 1.00 51.33 O
ATOM 28 O5' C A 47 48.107 168.299 36.725 1.00 50.95 O
TER
ATOM 1 O3' C B 48 48.705 169.241 45.518 1.00 66.21 O
ATOM 2 P A B 49 50.089 168.424 45.367 1.00 66.69 P
ATOM 3 OP1 A B 49 50.886 168.659 46.606 1.00 66.85 O
ATOM 4 OP2 A B 49 50.691 168.736 44.036 1.00 67.01 O
ATOM 5 O5' A B 49 49.633 166.898 45.347 1.00 63.48 O
ATOM 6 C5' A B 49 49.064 166.284 46.511 1.00 57.55 C
ATOM 7 C4' A B 49 49.164 164.783 46.412 1.00 54.75 C
ATOM 8 O4' A B 49 48.056 164.256 45.625 1.00 53.66 O
ATOM 9 C3' A B 49 50.441 164.243 45.767 1.00 53.03 C
ATOM 10 O3' A B 49 50.967 163.184 46.553 1.00 52.46 O
ATOM 11 C2' A B 49 49.944 163.706 44.421 1.00 52.86 C
ATOM 12 O2' A B 49 50.711 162.632 43.907 1.00 53.28 O
ATOM 13 C1' A B 49 48.543 163.228 44.791 1.00 51.97 C
ATOM 14 N9 A B 49 47.630 163.057 43.658 1.00 51.18 N
ATOM 15 C8 A B 49 47.365 163.938 42.635 1.00 51.08 C
ATOM 16 N7 A B 49 46.514 163.479 41.747 1.00 50.26 N
ATOM 17 C5 A B 49 46.192 162.214 42.217 1.00 50.18 C
ATOM 18 C6 A B 49 45.346 161.211 41.722 1.00 49.33 C
ATOM 19 N6 A B 49 44.652 161.325 40.589 1.00 49.67 N
ATOM 20 N1 A B 49 45.240 160.068 42.435 1.00 48.73 N
ATOM 21 C2 A B 49 45.948 159.949 43.562 1.00 48.17 C
ATOM 22 N3 A B 49 46.783 160.815 44.127 1.00 48.64 N
ATOM 23 C4 A B 49 46.864 161.943 43.398 1.00 50.40 C
ATOM 24 P A B 50 52.496 163.252 47.051 1.00 51.18 P
ATOM 25 OP1 A B 50 52.598 164.375 48.008 1.00 51.37 O
ATOM 26 OP2 A B 50 53.394 163.214 45.863 1.00 51.86 O
ATOM 27 O5' A B 50 52.670 161.891 47.849 1.00 50.91 O
TER
Atoms:
OP1: (53.508,166.814,36.217)
OP2: (54.384,165.734,38.374)
C3': (49.675,165.629,36.829)
C1': (49.106,163.712,38.060)
C5': (51.750,164.409,35.915)
O6: (48.894,159.076,41.867)
O4': (49.915,163.266,36.992)
C8: (49.999,162.933,40.327)
C2: (47.408,159.793,38.714)
C6: (48.624,159.722,40.849)
C5: (49.078,161.016,40.473)
C4: (48.656,161.542,39.266)
P: (53.801,165.600,37.018)
C4': (50.266,164.398,36.149)
C2': (49.518,165.166,38.276)
O2': (48.505,165.864,38.972)
N1: (47.773,159.178,39.888)
N2: (46.568,159.110,37.920)
N3: (47.833,160.990,38.346)
N7: (49.920,161.906,41.132)
N9: (49.255,162.778,39.175)
O5': (52.442,164.780,37.112)
O3': (48.391,165.855,36.258)
OP2: (54.384,165.734,38.374)
C3': (49.675,165.629,36.829)
C1': (49.106,163.712,38.060)
C5': (51.750,164.409,35.915)
O6: (48.894,159.076,41.867)
O4': (49.915,163.266,36.992)
C8: (49.999,162.933,40.327)
C2: (47.408,159.793,38.714)
C6: (48.624,159.722,40.849)
C5: (49.078,161.016,40.473)
C4: (48.656,161.542,39.266)
P: (53.801,165.600,37.018)
C4': (50.266,164.398,36.149)
C2': (49.518,165.166,38.276)
O2': (48.505,165.864,38.972)
N1: (47.773,159.178,39.888)
N2: (46.568,159.110,37.920)
N3: (47.833,160.990,38.346)
N7: (49.920,161.906,41.132)
N9: (49.255,162.778,39.175)
O5': (52.442,164.780,37.112)
O3': (48.391,165.855,36.258)
OP1: (50.886,168.659,46.606)
OP2: (50.691,168.736,44.036)
C3': (50.441,164.243,45.767)
C1': (48.543,163.228,44.791)
C5': (49.064,166.284,46.511)
O4': (48.056,164.256,45.625)
C8: (47.365,163.938,42.635)
O2': (50.711,162.632,43.907)
C6: (45.346,161.211,41.722)
C5: (46.192,162.214,42.217)
C4: (46.864,161.943,43.398)
P: (50.089,168.424,45.367)
C4': (49.164,164.783,46.412)
C2': (49.944,163.706,44.421)
C2: (45.948,159.949,43.562)
N1: (45.240,160.068,42.435)
N3: (46.783,160.815,44.127)
N6: (44.652,161.325,40.589)
N7: (46.514,163.479,41.747)
N9: (47.630,163.057,43.658)
O5': (49.633,166.898,45.347)
O3': (50.967,163.184,46.553)
OP2: (50.691,168.736,44.036)
C3': (50.441,164.243,45.767)
C1': (48.543,163.228,44.791)
C5': (49.064,166.284,46.511)
O4': (48.056,164.256,45.625)
C8: (47.365,163.938,42.635)
O2': (50.711,162.632,43.907)
C6: (45.346,161.211,41.722)
C5: (46.192,162.214,42.217)
C4: (46.864,161.943,43.398)
P: (50.089,168.424,45.367)
C4': (49.164,164.783,46.412)
C2': (49.944,163.706,44.421)
C2: (45.948,159.949,43.562)
N1: (45.240,160.068,42.435)
N3: (46.783,160.815,44.127)
N6: (44.652,161.325,40.589)
N7: (46.514,163.479,41.747)
N9: (47.630,163.057,43.658)
O5': (49.633,166.898,45.347)
O3': (50.967,163.184,46.553)
Image (generated by PyMOL):