ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0102:0104

Extra

PDB:
ATOM 1 O3' C A 101 75.606 151.445 38.810 1.00 27.56 O
ATOM 2 P G A 102 76.334 150.212 38.085 1.00 27.84 P
ATOM 3 OP1 G A 102 77.364 149.702 39.007 1.00 27.36 O
ATOM 4 OP2 G A 102 76.722 150.609 36.719 1.00 30.44 O
ATOM 5 O5' G A 102 75.202 149.100 37.980 1.00 33.52 O
ATOM 6 C5' G A 102 74.785 148.347 39.141 1.00 31.27 C
ATOM 7 C4' G A 102 73.643 147.431 38.784 1.00 31.86 C
ATOM 8 O4' G A 102 72.554 148.217 38.238 1.00 32.76 O
ATOM 9 C3' G A 102 73.935 146.398 37.709 1.00 31.01 C
ATOM 10 O3' G A 102 74.514 145.252 38.288 1.00 30.41 O
ATOM 11 C2' G A 102 72.548 146.085 37.176 1.00 33.65 C
ATOM 12 O2' G A 102 71.824 145.220 38.026 1.00 34.21 O
ATOM 13 C1' G A 102 71.888 147.465 37.235 1.00 36.68 C
ATOM 14 N9 G A 102 71.944 148.212 35.981 1.00 39.95 N
ATOM 15 C8 G A 102 72.895 149.131 35.608 1.00 40.61 C
ATOM 16 N7 G A 102 72.645 149.685 34.454 1.00 42.17 N
ATOM 17 C5 G A 102 71.466 149.088 34.032 1.00 41.38 C
ATOM 18 C6 G A 102 70.698 149.303 32.858 1.00 41.27 C
ATOM 19 O6 G A 102 70.903 150.102 31.940 1.00 41.58 O
ATOM 20 N1 G A 102 69.586 148.471 32.817 1.00 41.78 N
ATOM 21 C2 G A 102 69.248 147.555 33.783 1.00 41.97 C
ATOM 22 N2 G A 102 68.151 146.823 33.544 1.00 41.07 N
ATOM 23 N3 G A 102 69.941 147.364 34.896 1.00 41.31 N
ATOM 24 C4 G A 102 71.032 148.159 34.952 1.00 41.03 C
ATOM 25 P A A 103 75.928 144.724 37.769 1.00 33.90 P
ATOM 26 OP1 A A 103 76.479 143.836 38.823 1.00 32.34 O
ATOM 27 OP2 A A 103 76.714 145.896 37.314 1.00 33.71 O
ATOM 28 O5' A A 103 75.564 143.835 36.497 1.00 34.13 O
TER

ATOM 1 O3' A B 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 2 P A B 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 3 OP1 A B 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 4 OP2 A B 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 5 O5' A B 104 79.291 143.506 34.656 1.00 33.06 O
ATOM 6 C5' A B 104 78.975 144.732 35.333 1.00 32.49 C
ATOM 7 C4' A B 104 78.890 145.852 34.330 1.00 32.51 C
ATOM 8 O4' A B 104 77.720 145.640 33.489 1.00 31.96 O
ATOM 9 C3' A B 104 78.753 147.264 34.901 1.00 33.86 C
ATOM 10 O3' A B 104 79.432 148.191 34.052 1.00 34.05 O
ATOM 11 C2' A B 104 77.256 147.520 34.767 1.00 34.59 C
ATOM 12 O2' A B 104 76.915 148.885 34.688 1.00 36.60 O
ATOM 13 C1' A B 104 76.972 146.834 33.438 1.00 34.57 C
ATOM 14 N9 A B 104 75.566 146.527 33.185 1.00 35.99 N
ATOM 15 C8 A B 104 74.743 145.632 33.817 1.00 37.04 C
ATOM 16 N7 A B 104 73.516 145.624 33.350 1.00 39.07 N
ATOM 17 C5 A B 104 73.535 146.572 32.339 1.00 37.70 C
ATOM 18 C6 A B 104 72.543 147.040 31.452 1.00 38.63 C
ATOM 19 N6 A B 104 71.287 146.593 31.430 1.00 37.96 N
ATOM 20 N1 A B 104 72.893 148.000 30.570 1.00 38.82 N
ATOM 21 C2 A B 104 74.152 148.443 30.577 1.00 39.28 C
ATOM 22 N3 A B 104 75.174 148.078 31.351 1.00 39.71 N
ATOM 23 C4 A B 104 74.793 147.131 32.223 1.00 37.68 C
ATOM 24 P U B 105 81.037 148.313 34.098 1.00 35.20 P
ATOM 25 OP1 U B 105 81.647 147.047 34.582 1.00 34.16 O
ATOM 26 OP2 U B 105 81.359 149.584 34.780 1.00 36.41 O
ATOM 27 O5' U B 105 81.388 148.477 32.556 1.00 38.41 O
TER

Atoms:
OP1: (77.364,149.702,39.007)
OP2: (76.722,150.609,36.719)
C3': (73.935,146.398,37.709)
C1': (71.888,147.465,37.235)
C5': (74.785,148.347,39.141)
O6: (70.903,150.102,31.940)
O4': (72.554,148.217,38.238)
C8: (72.895,149.131,35.608)
C2: (69.248,147.555,33.783)
C6: (70.698,149.303,32.858)
C5: (71.466,149.088,34.032)
C4: (71.032,148.159,34.952)
P: (76.334,150.212,38.085)
C4': (73.643,147.431,38.784)
C2': (72.548,146.085,37.176)
O2': (71.824,145.220,38.026)
N1: (69.586,148.471,32.817)
N2: (68.151,146.823,33.544)
N3: (69.941,147.364,34.896)
N7: (72.645,149.685,34.454)
N9: (71.944,148.212,35.981)
O5': (75.202,149.100,37.980)
O3': (74.514,145.252,38.288)
OP1: (80.217,141.198,34.527)
OP2: (80.178,142.477,36.756)
C3': (78.753,147.264,34.901)
C1': (76.972,146.834,33.438)
C5': (78.975,144.732,35.333)
O4': (77.720,145.640,33.489)
C8: (74.743,145.632,33.817)
O2': (76.915,148.885,34.688)
C6: (72.543,147.040,31.452)
C5: (73.535,146.572,32.339)
C4: (74.793,147.131,32.223)
P: (79.542,142.152,35.456)
C4': (78.890,145.852,34.330)
C2': (77.256,147.520,34.767)
C2: (74.152,148.443,30.577)
N1: (72.893,148.000,30.570)
N3: (75.174,148.078,31.351)
N6: (71.287,146.593,31.430)
N7: (73.516,145.624,33.350)
N9: (75.566,146.527,33.185)
O5': (79.291,143.506,34.656)
O3': (79.432,148.191,34.052)
Image (generated by PyMOL):
PyMOL image
show in jmol