Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A58:A10
Extra
PDB:
ATOM 1 O3' U A 57 -9.861 4.528 34.207 1.00 19.10 O
ATOM 2 P G A 58 -9.429 3.047 34.651 1.00 18.80 P
ATOM 3 OP1 G A 58 -10.359 2.590 35.713 1.00 19.02 O
ATOM 4 OP2 G A 58 -7.976 3.110 34.945 1.00 18.78 O
ATOM 5 O5' G A 58 -9.701 2.226 33.320 1.00 19.24 O
ATOM 6 C5' G A 58 -11.036 2.040 32.855 1.00 18.97 C
ATOM 7 C4' G A 58 -11.045 1.221 31.591 1.00 18.99 C
ATOM 8 O4' G A 58 -10.312 1.901 30.542 1.00 19.12 O
ATOM 9 C3' G A 58 -10.391 -0.142 31.694 1.00 18.41 C
ATOM 10 O3' G A 58 -11.265 -1.091 32.275 1.00 18.46 O
ATOM 11 C2' G A 58 -10.028 -0.436 30.242 1.00 18.36 C
ATOM 12 O2' G A 58 -11.184 -0.863 29.539 1.00 18.49 O
ATOM 13 C1' G A 58 -9.649 0.957 29.730 1.00 18.87 C
ATOM 14 N9 G A 58 -8.195 1.231 29.766 1.00 19.86 N
ATOM 15 C8 G A 58 -7.498 1.860 30.771 1.00 19.96 C
ATOM 16 N7 G A 58 -6.221 1.970 30.520 1.00 20.09 N
ATOM 17 C5 G A 58 -6.062 1.384 29.271 1.00 19.68 C
ATOM 18 C6 G A 58 -4.896 1.207 28.480 1.00 19.37 C
ATOM 19 O6 G A 58 -3.732 1.543 28.728 1.00 18.97 O
ATOM 20 N1 G A 58 -5.185 0.566 27.283 1.00 19.21 N
ATOM 21 C2 G A 58 -6.429 0.146 26.892 1.00 19.46 C
ATOM 22 N2 G A 58 -6.495 -0.452 25.695 1.00 19.88 N
ATOM 23 N3 G A 58 -7.524 0.305 27.618 1.00 19.68 N
ATOM 24 C4 G A 58 -7.271 0.929 28.788 1.00 19.65 C
ATOM 25 P A A 59 -10.694 -2.329 33.121 1.00 18.10 P
ATOM 26 OP1 A A 59 -11.809 -2.909 33.910 1.00 17.81 O
ATOM 27 OP2 A A 59 -9.485 -1.846 33.834 1.00 18.39 O
ATOM 28 O5' A A 59 -10.284 -3.294 31.931 1.00 18.16 O
TER
ATOM 1 O3' A B 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 2 P A B 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 3 OP1 A B 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 4 OP2 A B 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 5 O5' A B 10 0.547 0.085 32.065 1.00 17.33 O
ATOM 6 C5' A B 10 1.744 -0.629 31.775 1.00 17.39 C
ATOM 7 C4' A B 10 1.518 -1.588 30.638 1.00 17.45 C
ATOM 8 O4' A B 10 0.429 -2.480 30.974 1.00 18.11 O
ATOM 9 C3' A B 10 1.119 -0.981 29.303 1.00 17.55 C
ATOM 10 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 11 C2' A B 10 0.402 -2.142 28.625 1.00 17.81 C
ATOM 12 O2' A B 10 1.363 -3.052 28.105 1.00 18.10 O
ATOM 13 C1' A B 10 -0.292 -2.815 29.809 1.00 18.11 C
ATOM 14 N9 A B 10 -1.710 -2.435 29.986 1.00 18.23 N
ATOM 15 C8 A B 10 -2.277 -1.800 31.062 1.00 18.29 C
ATOM 16 N7 A B 10 -3.568 -1.612 30.945 1.00 18.50 N
ATOM 17 C5 A B 10 -3.874 -2.169 29.713 1.00 18.47 C
ATOM 18 C6 A B 10 -5.084 -2.288 29.009 1.00 18.85 C
ATOM 19 N6 A B 10 -6.251 -1.834 29.471 1.00 18.81 N
ATOM 20 N1 A B 10 -5.050 -2.896 27.802 1.00 18.58 N
ATOM 21 C2 A B 10 -3.874 -3.346 27.348 1.00 18.48 C
ATOM 22 N3 A B 10 -2.672 -3.293 27.917 1.00 18.35 N
ATOM 23 C4 A B 10 -2.742 -2.686 29.113 1.00 18.23 C
ATOM 24 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 25 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 26 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 27 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
TER
ATOM 2 P G A 58 -9.429 3.047 34.651 1.00 18.80 P
ATOM 3 OP1 G A 58 -10.359 2.590 35.713 1.00 19.02 O
ATOM 4 OP2 G A 58 -7.976 3.110 34.945 1.00 18.78 O
ATOM 5 O5' G A 58 -9.701 2.226 33.320 1.00 19.24 O
ATOM 6 C5' G A 58 -11.036 2.040 32.855 1.00 18.97 C
ATOM 7 C4' G A 58 -11.045 1.221 31.591 1.00 18.99 C
ATOM 8 O4' G A 58 -10.312 1.901 30.542 1.00 19.12 O
ATOM 9 C3' G A 58 -10.391 -0.142 31.694 1.00 18.41 C
ATOM 10 O3' G A 58 -11.265 -1.091 32.275 1.00 18.46 O
ATOM 11 C2' G A 58 -10.028 -0.436 30.242 1.00 18.36 C
ATOM 12 O2' G A 58 -11.184 -0.863 29.539 1.00 18.49 O
ATOM 13 C1' G A 58 -9.649 0.957 29.730 1.00 18.87 C
ATOM 14 N9 G A 58 -8.195 1.231 29.766 1.00 19.86 N
ATOM 15 C8 G A 58 -7.498 1.860 30.771 1.00 19.96 C
ATOM 16 N7 G A 58 -6.221 1.970 30.520 1.00 20.09 N
ATOM 17 C5 G A 58 -6.062 1.384 29.271 1.00 19.68 C
ATOM 18 C6 G A 58 -4.896 1.207 28.480 1.00 19.37 C
ATOM 19 O6 G A 58 -3.732 1.543 28.728 1.00 18.97 O
ATOM 20 N1 G A 58 -5.185 0.566 27.283 1.00 19.21 N
ATOM 21 C2 G A 58 -6.429 0.146 26.892 1.00 19.46 C
ATOM 22 N2 G A 58 -6.495 -0.452 25.695 1.00 19.88 N
ATOM 23 N3 G A 58 -7.524 0.305 27.618 1.00 19.68 N
ATOM 24 C4 G A 58 -7.271 0.929 28.788 1.00 19.65 C
ATOM 25 P A A 59 -10.694 -2.329 33.121 1.00 18.10 P
ATOM 26 OP1 A A 59 -11.809 -2.909 33.910 1.00 17.81 O
ATOM 27 OP2 A A 59 -9.485 -1.846 33.834 1.00 18.39 O
ATOM 28 O5' A A 59 -10.284 -3.294 31.931 1.00 18.16 O
TER
ATOM 1 O3' A B 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 2 P A B 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 3 OP1 A B 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 4 OP2 A B 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 5 O5' A B 10 0.547 0.085 32.065 1.00 17.33 O
ATOM 6 C5' A B 10 1.744 -0.629 31.775 1.00 17.39 C
ATOM 7 C4' A B 10 1.518 -1.588 30.638 1.00 17.45 C
ATOM 8 O4' A B 10 0.429 -2.480 30.974 1.00 18.11 O
ATOM 9 C3' A B 10 1.119 -0.981 29.303 1.00 17.55 C
ATOM 10 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 11 C2' A B 10 0.402 -2.142 28.625 1.00 17.81 C
ATOM 12 O2' A B 10 1.363 -3.052 28.105 1.00 18.10 O
ATOM 13 C1' A B 10 -0.292 -2.815 29.809 1.00 18.11 C
ATOM 14 N9 A B 10 -1.710 -2.435 29.986 1.00 18.23 N
ATOM 15 C8 A B 10 -2.277 -1.800 31.062 1.00 18.29 C
ATOM 16 N7 A B 10 -3.568 -1.612 30.945 1.00 18.50 N
ATOM 17 C5 A B 10 -3.874 -2.169 29.713 1.00 18.47 C
ATOM 18 C6 A B 10 -5.084 -2.288 29.009 1.00 18.85 C
ATOM 19 N6 A B 10 -6.251 -1.834 29.471 1.00 18.81 N
ATOM 20 N1 A B 10 -5.050 -2.896 27.802 1.00 18.58 N
ATOM 21 C2 A B 10 -3.874 -3.346 27.348 1.00 18.48 C
ATOM 22 N3 A B 10 -2.672 -3.293 27.917 1.00 18.35 N
ATOM 23 C4 A B 10 -2.742 -2.686 29.113 1.00 18.23 C
ATOM 24 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 25 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 26 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 27 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
TER
Atoms:
OP1: (-10.359,2.590,35.713)
OP2: (-7.976,3.110,34.945)
C3': (-10.391,-0.142,31.694)
C1': (-9.649,0.957,29.730)
C5': (-11.036,2.040,32.855)
O6: (-3.732,1.543,28.728)
O4': (-10.312,1.901,30.542)
C8: (-7.498,1.860,30.771)
C2: (-6.429,0.146,26.892)
C6: (-4.896,1.207,28.480)
C5: (-6.062,1.384,29.271)
C4: (-7.271,0.929,28.788)
P: (-9.429,3.047,34.651)
C4': (-11.045,1.221,31.591)
C2': (-10.028,-0.436,30.242)
O2': (-11.184,-0.863,29.539)
N1: (-5.185,0.566,27.283)
N2: (-6.495,-0.452,25.695)
N3: (-7.524,0.305,27.618)
N7: (-6.221,1.970,30.520)
N9: (-8.195,1.231,29.766)
O5': (-9.701,2.226,33.320)
O3': (-11.265,-1.091,32.275)
OP2: (-7.976,3.110,34.945)
C3': (-10.391,-0.142,31.694)
C1': (-9.649,0.957,29.730)
C5': (-11.036,2.040,32.855)
O6: (-3.732,1.543,28.728)
O4': (-10.312,1.901,30.542)
C8: (-7.498,1.860,30.771)
C2: (-6.429,0.146,26.892)
C6: (-4.896,1.207,28.480)
C5: (-6.062,1.384,29.271)
C4: (-7.271,0.929,28.788)
P: (-9.429,3.047,34.651)
C4': (-11.045,1.221,31.591)
C2': (-10.028,-0.436,30.242)
O2': (-11.184,-0.863,29.539)
N1: (-5.185,0.566,27.283)
N2: (-6.495,-0.452,25.695)
N3: (-7.524,0.305,27.618)
N7: (-6.221,1.970,30.520)
N9: (-8.195,1.231,29.766)
O5': (-9.701,2.226,33.320)
O3': (-11.265,-1.091,32.275)
OP1: (-1.150,1.149,33.586)
OP2: (-0.061,-1.080,34.219)
C3': (1.119,-0.981,29.303)
C1': (-0.292,-2.815,29.809)
C5': (1.744,-0.629,31.775)
O4': (0.429,-2.480,30.974)
C8: (-2.277,-1.800,31.062)
O2': (1.363,-3.052,28.105)
C6: (-5.084,-2.288,29.009)
C5: (-3.874,-2.169,29.713)
C4: (-2.742,-2.686,29.113)
P: (0.026,0.247,33.560)
C4': (1.518,-1.588,30.638)
C2': (0.402,-2.142,28.625)
C2: (-3.874,-3.346,27.348)
N1: (-5.050,-2.896,27.802)
N3: (-2.672,-3.293,27.917)
N6: (-6.251,-1.834,29.471)
N7: (-3.568,-1.612,30.945)
N9: (-1.710,-2.435,29.986)
O5': (0.547,0.085,32.065)
O3': (2.252,-0.540,28.579)
OP2: (-0.061,-1.080,34.219)
C3': (1.119,-0.981,29.303)
C1': (-0.292,-2.815,29.809)
C5': (1.744,-0.629,31.775)
O4': (0.429,-2.480,30.974)
C8: (-2.277,-1.800,31.062)
O2': (1.363,-3.052,28.105)
C6: (-5.084,-2.288,29.009)
C5: (-3.874,-2.169,29.713)
C4: (-2.742,-2.686,29.113)
P: (0.026,0.247,33.560)
C4': (1.518,-1.588,30.638)
C2': (0.402,-2.142,28.625)
C2: (-3.874,-3.346,27.348)
N1: (-5.050,-2.896,27.802)
N3: (-2.672,-3.293,27.917)
N6: (-6.251,-1.834,29.471)
N7: (-3.568,-1.612,30.945)
N9: (-1.710,-2.435,29.986)
O5': (0.547,0.085,32.065)
O3': (2.252,-0.540,28.579)
Image (generated by PyMOL):