ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIX:A10:A9

Extra

PDB:
ATOM 1 O3' A A 9 35.832 12.239 29.113 1.00 29.14 O
ATOM 2 P G A 10 35.700 13.834 29.108 1.00 28.19 P
ATOM 3 OP1 G A 10 36.503 14.353 30.240 1.00 28.04 O
ATOM 4 OP2 G A 10 34.267 14.208 28.997 1.00 27.38 O
ATOM 5 O5' G A 10 36.481 14.190 27.759 1.00 27.55 O
ATOM 6 C5' G A 10 36.286 15.422 27.132 1.00 27.36 C
ATOM 7 C4' G A 10 37.007 15.472 25.801 1.00 27.57 C
ATOM 8 O4' G A 10 36.471 14.503 24.864 1.00 27.66 O
ATOM 9 C3' G A 10 36.852 16.835 25.148 1.00 28.42 C
ATOM 10 O3' G A 10 38.074 17.248 24.520 1.00 29.16 O
ATOM 11 C2' G A 10 35.681 16.593 24.195 1.00 28.19 C
ATOM 12 O2' G A 10 35.609 17.526 23.129 1.00 27.64 O
ATOM 13 C1' G A 10 35.956 15.165 23.729 1.00 28.40 C
ATOM 14 N9 G A 10 34.743 14.486 23.273 1.00 28.93 N
ATOM 15 C8 G A 10 34.402 14.217 21.969 1.00 29.37 C
ATOM 16 N7 G A 10 33.257 13.617 21.824 1.00 28.68 N
ATOM 17 C5 G A 10 32.806 13.472 23.122 1.00 29.29 C
ATOM 18 C6 G A 10 31.614 12.890 23.597 1.00 29.60 C
ATOM 19 O6 G A 10 30.718 12.375 22.931 1.00 29.83 O
ATOM 20 N1 G A 10 31.504 12.938 24.981 1.00 30.02 N
ATOM 21 C2 G A 10 32.451 13.489 25.805 1.00 30.10 C
ATOM 22 N2 G A 10 32.184 13.450 27.115 1.00 30.31 N
ATOM 23 N3 G A 10 33.580 14.041 25.375 1.00 29.97 N
ATOM 24 C4 G A 10 33.697 14.001 24.026 1.00 29.30 C
ATOM 25 P G A 11 39.261 17.912 25.368 1.00 28.65 P
ATOM 26 OP1 G A 11 40.419 18.094 24.482 1.00 30.16 O
ATOM 27 OP2 G A 11 39.444 17.183 26.636 1.00 29.25 O
ATOM 28 O5' G A 11 38.718 19.342 25.762 1.00 30.14 O
TER

ATOM 1 O3' G B 8 31.986 7.912 30.541 1.00 33.66 O
ATOM 2 P A B 9 32.005 9.505 30.404 1.00 33.48 P
ATOM 3 OP1 A B 9 32.413 10.055 31.717 1.00 34.06 O
ATOM 4 OP2 A B 9 30.744 9.959 29.774 1.00 33.05 O
ATOM 5 O5' A B 9 33.191 9.735 29.356 1.00 32.69 O
ATOM 6 C5' A B 9 34.535 9.403 29.680 1.00 31.42 C
ATOM 7 C4' A B 9 35.459 9.963 28.621 1.00 30.92 C
ATOM 8 O4' A B 9 35.346 9.181 27.410 1.00 31.23 O
ATOM 9 C3' A B 9 35.114 11.387 28.228 1.00 30.72 C
ATOM 10 O3' A B 9 35.832 12.239 29.113 1.00 29.14 O
ATOM 11 C2' A B 9 35.567 11.438 26.770 1.00 32.01 C
ATOM 12 O2' A B 9 36.950 11.707 26.632 1.00 33.57 O
ATOM 13 C1' A B 9 35.293 10.020 26.276 1.00 32.04 C
ATOM 14 N9 A B 9 34.022 9.859 25.546 1.00 32.52 N
ATOM 15 C8 A B 9 32.769 9.649 26.055 1.00 32.66 C
ATOM 16 N7 A B 9 31.825 9.555 25.145 1.00 32.76 N
ATOM 17 C5 A B 9 32.506 9.707 23.951 1.00 32.53 C
ATOM 18 C6 A B 9 32.097 9.697 22.603 1.00 32.07 C
ATOM 19 N6 A B 9 30.838 9.522 22.223 1.00 31.68 N
ATOM 20 N1 A B 9 33.029 9.873 21.644 1.00 32.55 N
ATOM 21 C2 A B 9 34.305 10.049 22.001 1.00 32.04 C
ATOM 22 N3 A B 9 34.808 10.074 23.232 1.00 32.59 N
ATOM 23 C4 A B 9 33.857 9.896 24.174 1.00 32.62 C
ATOM 24 P G B 10 35.700 13.834 29.108 1.00 28.19 P
ATOM 25 OP1 G B 10 36.503 14.353 30.240 1.00 28.04 O
ATOM 26 OP2 G B 10 34.267 14.208 28.997 1.00 27.38 O
ATOM 27 O5' G B 10 36.481 14.190 27.759 1.00 27.55 O
TER

Atoms:
OP1: (36.503,14.353,30.240)
OP2: (34.267,14.208,28.997)
C3': (36.852,16.835,25.148)
C1': (35.956,15.165,23.729)
C5': (36.286,15.422,27.132)
O6: (30.718,12.375,22.931)
O4': (36.471,14.503,24.864)
C8: (34.402,14.217,21.969)
C2: (32.451,13.489,25.805)
C6: (31.614,12.890,23.597)
C5: (32.806,13.472,23.122)
C4: (33.697,14.001,24.026)
P: (35.700,13.834,29.108)
C4': (37.007,15.472,25.801)
C2': (35.681,16.593,24.195)
O2': (35.609,17.526,23.129)
N1: (31.504,12.938,24.981)
N2: (32.184,13.450,27.115)
N3: (33.580,14.041,25.375)
N7: (33.257,13.617,21.824)
N9: (34.743,14.486,23.273)
O5': (36.481,14.190,27.759)
O3': (38.074,17.248,24.520)
OP1: (32.413,10.055,31.717)
OP2: (30.744,9.959,29.774)
C3': (35.114,11.387,28.228)
C1': (35.293,10.020,26.276)
C5': (34.535,9.403,29.680)
O4': (35.346,9.181,27.410)
C8: (32.769,9.649,26.055)
O2': (36.950,11.707,26.632)
C6: (32.097,9.697,22.603)
C5: (32.506,9.707,23.951)
C4: (33.857,9.896,24.174)
P: (32.005,9.505,30.404)
C4': (35.459,9.963,28.621)
C2': (35.567,11.438,26.770)
C2: (34.305,10.049,22.001)
N1: (33.029,9.873,21.644)
N3: (34.808,10.074,23.232)
N6: (30.838,9.522,22.223)
N7: (31.825,9.555,25.145)
N9: (34.022,9.859,25.546)
O5': (33.191,9.735,29.356)
O3': (35.832,12.239,29.113)
Image (generated by PyMOL):
PyMOL image
show in jmol