Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:046:049
Extra
PDB:
ATOM 1 O3' U A 45 55.665 165.835 36.211 1.00 62.80 O
ATOM 2 P G A 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G A 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G A 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G A 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G A 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G A 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G A 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G A 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G A 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G A 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G A 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G A 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G A 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G A 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G A 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G A 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G A 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G A 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G A 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G A 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G A 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G A 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G A 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C A 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C A 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C A 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C A 47 48.973 169.543 36.700 1.00 64.31 O
TER
ATOM 1 O3' C B 48 49.721 170.491 45.409 1.00 72.61 O
ATOM 2 P A B 49 51.060 169.602 45.455 1.00 75.11 P
ATOM 3 OP1 A B 49 51.697 169.842 46.791 1.00 74.67 O
ATOM 4 OP2 A B 49 51.838 169.854 44.206 1.00 74.65 O
ATOM 5 O5' A B 49 50.529 168.098 45.381 1.00 72.54 O
ATOM 6 C5' A B 49 49.824 167.505 46.486 1.00 67.64 C
ATOM 7 C4' A B 49 50.000 166.006 46.477 1.00 64.70 C
ATOM 8 O4' A B 49 48.942 165.379 45.697 1.00 64.42 O
ATOM 9 C3' A B 49 51.326 165.492 45.919 1.00 62.47 C
ATOM 10 O3' A B 49 51.862 164.460 46.739 1.00 61.81 O
ATOM 11 C2' A B 49 50.926 164.930 44.558 1.00 62.43 C
ATOM 12 O2' A B 49 51.777 163.884 44.140 1.00 60.33 O
ATOM 13 C1' A B 49 49.511 164.419 44.837 1.00 63.90 C
ATOM 14 N9 A B 49 48.657 164.291 43.653 1.00 65.38 N
ATOM 15 C8 A B 49 48.559 165.148 42.587 1.00 66.50 C
ATOM 16 N7 A B 49 47.752 164.730 41.641 1.00 67.90 N
ATOM 17 C5 A B 49 47.270 163.522 42.123 1.00 68.91 C
ATOM 18 C6 A B 49 46.377 162.566 41.581 1.00 70.06 C
ATOM 19 N6 A B 49 45.811 162.674 40.372 1.00 69.14 N
ATOM 20 N1 A B 49 46.094 161.476 42.331 1.00 70.00 N
ATOM 21 C2 A B 49 46.679 161.355 43.528 1.00 68.86 C
ATOM 22 N3 A B 49 47.542 162.172 44.135 1.00 68.97 N
ATOM 23 C4 A B 49 47.802 163.249 43.372 1.00 67.67 C
ATOM 24 P A B 50 53.404 164.533 47.198 1.00 59.01 P
ATOM 25 OP1 A B 50 53.550 165.671 48.142 1.00 56.55 O
ATOM 26 OP2 A B 50 54.245 164.475 45.978 1.00 58.90 O
ATOM 27 O5' A B 50 53.617 163.168 47.977 1.00 57.74 O
TER
ATOM 2 P G A 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G A 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G A 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G A 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G A 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G A 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G A 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G A 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G A 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G A 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G A 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G A 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G A 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G A 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G A 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G A 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G A 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G A 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G A 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G A 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G A 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G A 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G A 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C A 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C A 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C A 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C A 47 48.973 169.543 36.700 1.00 64.31 O
TER
ATOM 1 O3' C B 48 49.721 170.491 45.409 1.00 72.61 O
ATOM 2 P A B 49 51.060 169.602 45.455 1.00 75.11 P
ATOM 3 OP1 A B 49 51.697 169.842 46.791 1.00 74.67 O
ATOM 4 OP2 A B 49 51.838 169.854 44.206 1.00 74.65 O
ATOM 5 O5' A B 49 50.529 168.098 45.381 1.00 72.54 O
ATOM 6 C5' A B 49 49.824 167.505 46.486 1.00 67.64 C
ATOM 7 C4' A B 49 50.000 166.006 46.477 1.00 64.70 C
ATOM 8 O4' A B 49 48.942 165.379 45.697 1.00 64.42 O
ATOM 9 C3' A B 49 51.326 165.492 45.919 1.00 62.47 C
ATOM 10 O3' A B 49 51.862 164.460 46.739 1.00 61.81 O
ATOM 11 C2' A B 49 50.926 164.930 44.558 1.00 62.43 C
ATOM 12 O2' A B 49 51.777 163.884 44.140 1.00 60.33 O
ATOM 13 C1' A B 49 49.511 164.419 44.837 1.00 63.90 C
ATOM 14 N9 A B 49 48.657 164.291 43.653 1.00 65.38 N
ATOM 15 C8 A B 49 48.559 165.148 42.587 1.00 66.50 C
ATOM 16 N7 A B 49 47.752 164.730 41.641 1.00 67.90 N
ATOM 17 C5 A B 49 47.270 163.522 42.123 1.00 68.91 C
ATOM 18 C6 A B 49 46.377 162.566 41.581 1.00 70.06 C
ATOM 19 N6 A B 49 45.811 162.674 40.372 1.00 69.14 N
ATOM 20 N1 A B 49 46.094 161.476 42.331 1.00 70.00 N
ATOM 21 C2 A B 49 46.679 161.355 43.528 1.00 68.86 C
ATOM 22 N3 A B 49 47.542 162.172 44.135 1.00 68.97 N
ATOM 23 C4 A B 49 47.802 163.249 43.372 1.00 67.67 C
ATOM 24 P A B 50 53.404 164.533 47.198 1.00 59.01 P
ATOM 25 OP1 A B 50 53.550 165.671 48.142 1.00 56.55 O
ATOM 26 OP2 A B 50 54.245 164.475 45.978 1.00 58.90 O
ATOM 27 O5' A B 50 53.617 163.168 47.977 1.00 57.74 O
TER
Atoms:
OP1: (54.264,167.890,36.149)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
OP1: (51.697,169.842,46.791)
OP2: (51.838,169.854,44.206)
C3': (51.326,165.492,45.919)
C1': (49.511,164.419,44.837)
C5': (49.824,167.505,46.486)
O4': (48.942,165.379,45.697)
C8: (48.559,165.148,42.587)
O2': (51.777,163.884,44.140)
C6: (46.377,162.566,41.581)
C5: (47.270,163.522,42.123)
C4: (47.802,163.249,43.372)
P: (51.060,169.602,45.455)
C4': (50.000,166.006,46.477)
C2': (50.926,164.930,44.558)
C2: (46.679,161.355,43.528)
N1: (46.094,161.476,42.331)
N3: (47.542,162.172,44.135)
N6: (45.811,162.674,40.372)
N7: (47.752,164.730,41.641)
N9: (48.657,164.291,43.653)
O5': (50.529,168.098,45.381)
O3': (51.862,164.460,46.739)
OP2: (51.838,169.854,44.206)
C3': (51.326,165.492,45.919)
C1': (49.511,164.419,44.837)
C5': (49.824,167.505,46.486)
O4': (48.942,165.379,45.697)
C8: (48.559,165.148,42.587)
O2': (51.777,163.884,44.140)
C6: (46.377,162.566,41.581)
C5: (47.270,163.522,42.123)
C4: (47.802,163.249,43.372)
P: (51.060,169.602,45.455)
C4': (50.000,166.006,46.477)
C2': (50.926,164.930,44.558)
C2: (46.679,161.355,43.528)
N1: (46.094,161.476,42.331)
N3: (47.542,162.172,44.135)
N6: (45.811,162.674,40.372)
N7: (47.752,164.730,41.641)
N9: (48.657,164.291,43.653)
O5': (50.529,168.098,45.381)
O3': (51.862,164.460,46.739)
Image (generated by PyMOL):