Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11086:11087
Extra
PDB:
ATOM 1 O3' C A1085 53.691 -12.429 44.570 1.00 31.47 O
ATOM 2 P G A1086 54.644 -12.507 45.854 1.00 32.03 P
ATOM 3 OP1 G A1086 55.151 -11.126 46.091 1.00 31.98 O
ATOM 4 OP2 G A1086 55.623 -13.589 45.650 1.00 32.13 O
ATOM 5 O5' G A1086 53.639 -12.949 46.997 1.00 31.87 O
ATOM 6 C5' G A1086 52.638 -12.091 47.512 1.00 31.75 C
ATOM 7 C4' G A1086 51.910 -12.807 48.595 1.00 31.64 C
ATOM 8 O4' G A1086 51.347 -14.026 48.062 1.00 31.72 O
ATOM 9 C3' G A1086 52.788 -13.271 49.724 1.00 31.58 C
ATOM 10 O3' G A1086 53.049 -12.204 50.634 1.00 31.47 O
ATOM 11 C2' G A1086 51.997 -14.436 50.296 1.00 31.54 C
ATOM 12 O2' G A1086 50.977 -13.973 51.158 1.00 31.42 O
ATOM 13 C1' G A1086 51.336 -15.022 49.035 1.00 31.67 C
ATOM 14 N9 G A1086 52.072 -16.177 48.506 1.00 31.81 N
ATOM 15 C8 G A1086 53.074 -16.019 47.592 1.00 31.93 C
ATOM 16 N7 G A1086 53.669 -17.125 47.258 1.00 32.05 N
ATOM 17 C5 G A1086 53.008 -18.083 47.982 1.00 32.01 C
ATOM 18 C6 G A1086 53.210 -19.464 47.991 1.00 32.12 C
ATOM 19 O6 G A1086 54.062 -20.023 47.325 1.00 32.27 O
ATOM 20 N1 G A1086 52.336 -20.190 48.826 1.00 32.06 N
ATOM 21 C2 G A1086 51.394 -19.574 49.556 1.00 31.91 C
ATOM 22 N2 G A1086 50.660 -20.351 50.314 1.00 31.87 N
ATOM 23 N3 G A1086 51.189 -18.267 49.554 1.00 31.80 N
ATOM 24 C4 G A1086 52.011 -17.545 48.753 1.00 31.86 C
ATOM 25 P A A1087 54.170 -12.299 51.797 1.00 36.40 P
ATOM 26 OP1 A A1087 53.872 -13.486 52.610 1.00 36.37 O
ATOM 27 OP2 A A1087 54.189 -11.017 52.456 1.00 36.31 O
ATOM 28 O5' A A1087 55.528 -12.538 51.022 1.00 36.53 O
TER
ATOM 1 O3' G B1086 53.049 -12.204 50.634 1.00 31.47 O
ATOM 2 P A B1087 54.170 -12.299 51.797 1.00 36.40 P
ATOM 3 OP1 A B1087 53.872 -13.486 52.610 1.00 36.37 O
ATOM 4 OP2 A B1087 54.189 -11.017 52.456 1.00 36.31 O
ATOM 5 O5' A B1087 55.528 -12.538 51.022 1.00 36.53 O
ATOM 6 C5' A B1087 56.742 -12.545 51.750 1.00 36.54 C
ATOM 7 C4' A B1087 57.735 -13.455 51.150 1.00 36.68 C
ATOM 8 O4' A B1087 57.412 -14.833 51.475 1.00 36.69 O
ATOM 9 C3' A B1087 57.802 -13.387 49.650 1.00 36.81 C
ATOM 10 O3' A B1087 59.180 -13.513 49.268 1.00 36.93 O
ATOM 11 C2' A B1087 56.971 -14.617 49.244 1.00 36.85 C
ATOM 12 O2' A B1087 57.189 -15.114 47.960 1.00 37.01 O
ATOM 13 C1' A B1087 57.402 -15.589 50.292 1.00 36.83 C
ATOM 14 N9 A B1087 56.514 -16.707 50.461 1.00 36.83 N
ATOM 15 C8 A B1087 55.253 -16.754 51.010 1.00 36.72 C
ATOM 16 N7 A B1087 54.664 -17.935 51.026 1.00 36.76 N
ATOM 17 C5 A B1087 55.647 -18.700 50.450 1.00 36.92 C
ATOM 18 C6 A B1087 55.656 -20.044 50.205 1.00 37.04 C
ATOM 19 N6 A B1087 54.611 -20.782 50.537 1.00 37.02 N
ATOM 20 N1 A B1087 56.754 -20.546 49.616 1.00 37.20 N
ATOM 21 C2 A B1087 57.763 -19.741 49.306 1.00 37.22 C
ATOM 22 N3 A B1087 57.891 -18.435 49.507 1.00 37.11 N
ATOM 23 C4 A B1087 56.785 -17.976 50.104 1.00 36.96 C
ATOM 24 P U B1088 60.155 -12.220 49.376 1.00 34.26 P
ATOM 25 OP1 U B1088 61.562 -12.700 49.527 1.00 34.37 O
ATOM 26 OP2 U B1088 59.597 -11.285 50.429 1.00 34.10 O
ATOM 27 O5' U B1088 59.939 -11.599 47.948 1.00 34.36 O
TER
ATOM 2 P G A1086 54.644 -12.507 45.854 1.00 32.03 P
ATOM 3 OP1 G A1086 55.151 -11.126 46.091 1.00 31.98 O
ATOM 4 OP2 G A1086 55.623 -13.589 45.650 1.00 32.13 O
ATOM 5 O5' G A1086 53.639 -12.949 46.997 1.00 31.87 O
ATOM 6 C5' G A1086 52.638 -12.091 47.512 1.00 31.75 C
ATOM 7 C4' G A1086 51.910 -12.807 48.595 1.00 31.64 C
ATOM 8 O4' G A1086 51.347 -14.026 48.062 1.00 31.72 O
ATOM 9 C3' G A1086 52.788 -13.271 49.724 1.00 31.58 C
ATOM 10 O3' G A1086 53.049 -12.204 50.634 1.00 31.47 O
ATOM 11 C2' G A1086 51.997 -14.436 50.296 1.00 31.54 C
ATOM 12 O2' G A1086 50.977 -13.973 51.158 1.00 31.42 O
ATOM 13 C1' G A1086 51.336 -15.022 49.035 1.00 31.67 C
ATOM 14 N9 G A1086 52.072 -16.177 48.506 1.00 31.81 N
ATOM 15 C8 G A1086 53.074 -16.019 47.592 1.00 31.93 C
ATOM 16 N7 G A1086 53.669 -17.125 47.258 1.00 32.05 N
ATOM 17 C5 G A1086 53.008 -18.083 47.982 1.00 32.01 C
ATOM 18 C6 G A1086 53.210 -19.464 47.991 1.00 32.12 C
ATOM 19 O6 G A1086 54.062 -20.023 47.325 1.00 32.27 O
ATOM 20 N1 G A1086 52.336 -20.190 48.826 1.00 32.06 N
ATOM 21 C2 G A1086 51.394 -19.574 49.556 1.00 31.91 C
ATOM 22 N2 G A1086 50.660 -20.351 50.314 1.00 31.87 N
ATOM 23 N3 G A1086 51.189 -18.267 49.554 1.00 31.80 N
ATOM 24 C4 G A1086 52.011 -17.545 48.753 1.00 31.86 C
ATOM 25 P A A1087 54.170 -12.299 51.797 1.00 36.40 P
ATOM 26 OP1 A A1087 53.872 -13.486 52.610 1.00 36.37 O
ATOM 27 OP2 A A1087 54.189 -11.017 52.456 1.00 36.31 O
ATOM 28 O5' A A1087 55.528 -12.538 51.022 1.00 36.53 O
TER
ATOM 1 O3' G B1086 53.049 -12.204 50.634 1.00 31.47 O
ATOM 2 P A B1087 54.170 -12.299 51.797 1.00 36.40 P
ATOM 3 OP1 A B1087 53.872 -13.486 52.610 1.00 36.37 O
ATOM 4 OP2 A B1087 54.189 -11.017 52.456 1.00 36.31 O
ATOM 5 O5' A B1087 55.528 -12.538 51.022 1.00 36.53 O
ATOM 6 C5' A B1087 56.742 -12.545 51.750 1.00 36.54 C
ATOM 7 C4' A B1087 57.735 -13.455 51.150 1.00 36.68 C
ATOM 8 O4' A B1087 57.412 -14.833 51.475 1.00 36.69 O
ATOM 9 C3' A B1087 57.802 -13.387 49.650 1.00 36.81 C
ATOM 10 O3' A B1087 59.180 -13.513 49.268 1.00 36.93 O
ATOM 11 C2' A B1087 56.971 -14.617 49.244 1.00 36.85 C
ATOM 12 O2' A B1087 57.189 -15.114 47.960 1.00 37.01 O
ATOM 13 C1' A B1087 57.402 -15.589 50.292 1.00 36.83 C
ATOM 14 N9 A B1087 56.514 -16.707 50.461 1.00 36.83 N
ATOM 15 C8 A B1087 55.253 -16.754 51.010 1.00 36.72 C
ATOM 16 N7 A B1087 54.664 -17.935 51.026 1.00 36.76 N
ATOM 17 C5 A B1087 55.647 -18.700 50.450 1.00 36.92 C
ATOM 18 C6 A B1087 55.656 -20.044 50.205 1.00 37.04 C
ATOM 19 N6 A B1087 54.611 -20.782 50.537 1.00 37.02 N
ATOM 20 N1 A B1087 56.754 -20.546 49.616 1.00 37.20 N
ATOM 21 C2 A B1087 57.763 -19.741 49.306 1.00 37.22 C
ATOM 22 N3 A B1087 57.891 -18.435 49.507 1.00 37.11 N
ATOM 23 C4 A B1087 56.785 -17.976 50.104 1.00 36.96 C
ATOM 24 P U B1088 60.155 -12.220 49.376 1.00 34.26 P
ATOM 25 OP1 U B1088 61.562 -12.700 49.527 1.00 34.37 O
ATOM 26 OP2 U B1088 59.597 -11.285 50.429 1.00 34.10 O
ATOM 27 O5' U B1088 59.939 -11.599 47.948 1.00 34.36 O
TER
Atoms:
OP1: (55.151,-11.126,46.091)
OP2: (55.623,-13.589,45.650)
C3': (52.788,-13.271,49.724)
C1': (51.336,-15.022,49.035)
C5': (52.638,-12.091,47.512)
O6: (54.062,-20.023,47.325)
O4': (51.347,-14.026,48.062)
C8: (53.074,-16.019,47.592)
C2: (51.394,-19.574,49.556)
C6: (53.210,-19.464,47.991)
C5: (53.008,-18.083,47.982)
C4: (52.011,-17.545,48.753)
P: (54.644,-12.507,45.854)
C4': (51.910,-12.807,48.595)
C2': (51.997,-14.436,50.296)
O2': (50.977,-13.973,51.158)
N1: (52.336,-20.190,48.826)
N2: (50.660,-20.351,50.314)
N3: (51.189,-18.267,49.554)
N7: (53.669,-17.125,47.258)
N9: (52.072,-16.177,48.506)
O5': (53.639,-12.949,46.997)
O3': (53.049,-12.204,50.634)
OP2: (55.623,-13.589,45.650)
C3': (52.788,-13.271,49.724)
C1': (51.336,-15.022,49.035)
C5': (52.638,-12.091,47.512)
O6: (54.062,-20.023,47.325)
O4': (51.347,-14.026,48.062)
C8: (53.074,-16.019,47.592)
C2: (51.394,-19.574,49.556)
C6: (53.210,-19.464,47.991)
C5: (53.008,-18.083,47.982)
C4: (52.011,-17.545,48.753)
P: (54.644,-12.507,45.854)
C4': (51.910,-12.807,48.595)
C2': (51.997,-14.436,50.296)
O2': (50.977,-13.973,51.158)
N1: (52.336,-20.190,48.826)
N2: (50.660,-20.351,50.314)
N3: (51.189,-18.267,49.554)
N7: (53.669,-17.125,47.258)
N9: (52.072,-16.177,48.506)
O5': (53.639,-12.949,46.997)
O3': (53.049,-12.204,50.634)
OP1: (53.872,-13.486,52.610)
OP2: (54.189,-11.017,52.456)
C3': (57.802,-13.387,49.650)
C1': (57.402,-15.589,50.292)
C5': (56.742,-12.545,51.750)
O4': (57.412,-14.833,51.475)
C8: (55.253,-16.754,51.010)
O2': (57.189,-15.114,47.960)
C6: (55.656,-20.044,50.205)
C5: (55.647,-18.700,50.450)
C4: (56.785,-17.976,50.104)
P: (54.170,-12.299,51.797)
C4': (57.735,-13.455,51.150)
C2': (56.971,-14.617,49.244)
C2: (57.763,-19.741,49.306)
N1: (56.754,-20.546,49.616)
N3: (57.891,-18.435,49.507)
N6: (54.611,-20.782,50.537)
N7: (54.664,-17.935,51.026)
N9: (56.514,-16.707,50.461)
O5': (55.528,-12.538,51.022)
O3': (59.180,-13.513,49.268)
OP2: (54.189,-11.017,52.456)
C3': (57.802,-13.387,49.650)
C1': (57.402,-15.589,50.292)
C5': (56.742,-12.545,51.750)
O4': (57.412,-14.833,51.475)
C8: (55.253,-16.754,51.010)
O2': (57.189,-15.114,47.960)
C6: (55.656,-20.044,50.205)
C5: (55.647,-18.700,50.450)
C4: (56.785,-17.976,50.104)
P: (54.170,-12.299,51.797)
C4': (57.735,-13.455,51.150)
C2': (56.971,-14.617,49.244)
C2: (57.763,-19.741,49.306)
N1: (56.754,-20.546,49.616)
N3: (57.891,-18.435,49.507)
N6: (54.611,-20.782,50.537)
N7: (54.664,-17.935,51.026)
N9: (56.514,-16.707,50.461)
O5': (55.528,-12.538,51.022)
O3': (59.180,-13.513,49.268)
Image (generated by PyMOL):