Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02038:02490
Extra
PDB:
ATOM 1 O3' G A2037 58.508 144.417 109.382 1.00 30.75 O
ATOM 2 P G A2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 3 OP1 G A2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 4 OP2 G A2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 5 O5' G A2038 58.420 141.994 108.920 1.00 27.92 O
ATOM 6 C5' G A2038 58.391 140.778 108.165 1.00 28.14 C
ATOM 7 C4' G A2038 57.220 139.919 108.599 1.00 26.86 C
ATOM 8 O4' G A2038 55.972 140.628 108.347 1.00 29.34 O
ATOM 9 C3' G A2038 57.101 138.600 107.851 1.00 26.05 C
ATOM 10 O3' G A2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 11 C2' G A2038 56.169 138.967 106.705 1.00 26.81 C
ATOM 12 O2' G A2038 55.489 137.867 106.142 1.00 24.45 O
ATOM 13 C1' G A2038 55.192 139.892 107.424 1.00 28.11 C
ATOM 14 N9 G A2038 54.514 140.807 106.514 1.00 28.44 N
ATOM 15 C8 G A2038 55.059 141.858 105.823 1.00 27.51 C
ATOM 16 N7 G A2038 54.212 142.432 105.014 1.00 30.17 N
ATOM 17 C5 G A2038 53.028 141.726 105.195 1.00 31.12 C
ATOM 18 C6 G A2038 51.756 141.868 104.564 1.00 31.36 C
ATOM 19 O6 G A2038 51.417 142.663 103.673 1.00 32.31 O
ATOM 20 N1 G A2038 50.836 140.950 105.056 1.00 28.91 N
ATOM 21 C2 G A2038 51.097 140.008 106.015 1.00 31.48 C
ATOM 22 N2 G A2038 50.074 139.206 106.356 1.00 32.63 N
ATOM 23 N3 G A2038 52.274 139.855 106.600 1.00 31.85 N
ATOM 24 C4 G A2038 53.189 140.741 106.141 1.00 31.19 C
ATOM 25 P G A2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 26 OP1 G A2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 27 OP2 G A2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 28 O5' G A2039 56.150 135.627 110.082 1.00 28.57 O
TER
ATOM 1 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 2 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 3 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 4 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 5 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
ATOM 6 C5' A B2490 51.652 142.900 98.237 1.00 35.15 C
ATOM 7 C4' A B2490 50.282 142.309 98.450 1.00 36.07 C
ATOM 8 O4' A B2490 50.491 141.023 99.080 1.00 37.89 O
ATOM 9 C3' A B2490 49.389 143.040 99.444 1.00 37.22 C
ATOM 10 O3' A B2490 48.070 142.510 99.319 1.00 37.76 O
ATOM 11 C2' A B2490 50.009 142.612 100.772 1.00 37.80 C
ATOM 12 O2' A B2490 49.128 142.665 101.873 1.00 39.93 O
ATOM 13 C1' A B2490 50.388 141.158 100.485 1.00 37.57 C
ATOM 14 N9 A B2490 51.682 140.801 101.063 1.00 37.23 N
ATOM 15 C8 A B2490 52.890 141.408 100.838 1.00 35.16 C
ATOM 16 N7 A B2490 53.876 140.888 101.521 1.00 36.80 N
ATOM 17 C5 A B2490 53.281 139.864 102.240 1.00 35.98 C
ATOM 18 C6 A B2490 53.791 138.945 103.163 1.00 36.79 C
ATOM 19 N6 A B2490 55.072 138.917 103.543 1.00 37.43 N
ATOM 20 N1 A B2490 52.933 138.049 103.698 1.00 35.08 N
ATOM 21 C2 A B2490 51.648 138.095 103.329 1.00 34.98 C
ATOM 22 N3 A B2490 51.048 138.919 102.479 1.00 35.35 N
ATOM 23 C4 A B2490 51.931 139.791 101.961 1.00 36.43 C
ATOM 24 P U B2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 25 OP1 U B2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 26 OP2 U B2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 27 O5' U B2491 45.744 142.339 98.462 1.00 36.62 O
TER
ATOM 2 P G A2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 3 OP1 G A2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 4 OP2 G A2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 5 O5' G A2038 58.420 141.994 108.920 1.00 27.92 O
ATOM 6 C5' G A2038 58.391 140.778 108.165 1.00 28.14 C
ATOM 7 C4' G A2038 57.220 139.919 108.599 1.00 26.86 C
ATOM 8 O4' G A2038 55.972 140.628 108.347 1.00 29.34 O
ATOM 9 C3' G A2038 57.101 138.600 107.851 1.00 26.05 C
ATOM 10 O3' G A2038 56.438 137.673 108.685 1.00 28.48 O
ATOM 11 C2' G A2038 56.169 138.967 106.705 1.00 26.81 C
ATOM 12 O2' G A2038 55.489 137.867 106.142 1.00 24.45 O
ATOM 13 C1' G A2038 55.192 139.892 107.424 1.00 28.11 C
ATOM 14 N9 G A2038 54.514 140.807 106.514 1.00 28.44 N
ATOM 15 C8 G A2038 55.059 141.858 105.823 1.00 27.51 C
ATOM 16 N7 G A2038 54.212 142.432 105.014 1.00 30.17 N
ATOM 17 C5 G A2038 53.028 141.726 105.195 1.00 31.12 C
ATOM 18 C6 G A2038 51.756 141.868 104.564 1.00 31.36 C
ATOM 19 O6 G A2038 51.417 142.663 103.673 1.00 32.31 O
ATOM 20 N1 G A2038 50.836 140.950 105.056 1.00 28.91 N
ATOM 21 C2 G A2038 51.097 140.008 106.015 1.00 31.48 C
ATOM 22 N2 G A2038 50.074 139.206 106.356 1.00 32.63 N
ATOM 23 N3 G A2038 52.274 139.855 106.600 1.00 31.85 N
ATOM 24 C4 G A2038 53.189 140.741 106.141 1.00 31.19 C
ATOM 25 P G A2039 57.281 136.613 109.536 1.00 31.98 P
ATOM 26 OP1 G A2039 57.869 137.375 110.678 1.00 29.11 O
ATOM 27 OP2 G A2039 58.170 135.864 108.625 1.00 27.83 O
ATOM 28 O5' G A2039 56.150 135.627 110.082 1.00 28.57 O
TER
ATOM 1 O3' U B2489 53.286 146.073 97.752 1.00 31.48 O
ATOM 2 P A B2490 52.399 145.330 98.858 1.00 31.50 P
ATOM 3 OP1 A B2490 51.428 146.307 99.385 1.00 32.31 O
ATOM 4 OP2 A B2490 53.310 144.641 99.790 1.00 35.66 O
ATOM 5 O5' A B2490 51.558 144.289 98.000 1.00 34.80 O
ATOM 6 C5' A B2490 51.652 142.900 98.237 1.00 35.15 C
ATOM 7 C4' A B2490 50.282 142.309 98.450 1.00 36.07 C
ATOM 8 O4' A B2490 50.491 141.023 99.080 1.00 37.89 O
ATOM 9 C3' A B2490 49.389 143.040 99.444 1.00 37.22 C
ATOM 10 O3' A B2490 48.070 142.510 99.319 1.00 37.76 O
ATOM 11 C2' A B2490 50.009 142.612 100.772 1.00 37.80 C
ATOM 12 O2' A B2490 49.128 142.665 101.873 1.00 39.93 O
ATOM 13 C1' A B2490 50.388 141.158 100.485 1.00 37.57 C
ATOM 14 N9 A B2490 51.682 140.801 101.063 1.00 37.23 N
ATOM 15 C8 A B2490 52.890 141.408 100.838 1.00 35.16 C
ATOM 16 N7 A B2490 53.876 140.888 101.521 1.00 36.80 N
ATOM 17 C5 A B2490 53.281 139.864 102.240 1.00 35.98 C
ATOM 18 C6 A B2490 53.791 138.945 103.163 1.00 36.79 C
ATOM 19 N6 A B2490 55.072 138.917 103.543 1.00 37.43 N
ATOM 20 N1 A B2490 52.933 138.049 103.698 1.00 35.08 N
ATOM 21 C2 A B2490 51.648 138.095 103.329 1.00 34.98 C
ATOM 22 N3 A B2490 51.048 138.919 102.479 1.00 35.35 N
ATOM 23 C4 A B2490 51.931 139.791 101.961 1.00 36.43 C
ATOM 24 P U B2491 46.854 143.428 98.801 1.00 36.89 P
ATOM 25 OP1 U B2491 47.246 144.137 97.560 1.00 39.16 O
ATOM 26 OP2 U B2491 46.365 144.195 99.954 1.00 37.33 O
ATOM 27 O5' U B2491 45.744 142.339 98.462 1.00 36.62 O
TER
Atoms:
OP1: (60.419,143.350,108.211)
OP2: (58.154,143.643,107.067)
C3': (57.101,138.600,107.851)
C1': (55.192,139.892,107.424)
C5': (58.391,140.778,108.165)
O6: (51.417,142.663,103.673)
O4': (55.972,140.628,108.347)
C8: (55.059,141.858,105.823)
C2: (51.097,140.008,106.015)
C6: (51.756,141.868,104.564)
C5: (53.028,141.726,105.195)
C4: (53.189,140.741,106.141)
P: (58.944,143.351,108.282)
C4': (57.220,139.919,108.599)
C2': (56.169,138.967,106.705)
O2': (55.489,137.867,106.142)
N1: (50.836,140.950,105.056)
N2: (50.074,139.206,106.356)
N3: (52.274,139.855,106.600)
N7: (54.212,142.432,105.014)
N9: (54.514,140.807,106.514)
O5': (58.420,141.994,108.920)
O3': (56.438,137.673,108.685)
OP2: (58.154,143.643,107.067)
C3': (57.101,138.600,107.851)
C1': (55.192,139.892,107.424)
C5': (58.391,140.778,108.165)
O6: (51.417,142.663,103.673)
O4': (55.972,140.628,108.347)
C8: (55.059,141.858,105.823)
C2: (51.097,140.008,106.015)
C6: (51.756,141.868,104.564)
C5: (53.028,141.726,105.195)
C4: (53.189,140.741,106.141)
P: (58.944,143.351,108.282)
C4': (57.220,139.919,108.599)
C2': (56.169,138.967,106.705)
O2': (55.489,137.867,106.142)
N1: (50.836,140.950,105.056)
N2: (50.074,139.206,106.356)
N3: (52.274,139.855,106.600)
N7: (54.212,142.432,105.014)
N9: (54.514,140.807,106.514)
O5': (58.420,141.994,108.920)
O3': (56.438,137.673,108.685)
OP1: (51.428,146.307,99.385)
OP2: (53.310,144.641,99.790)
C3': (49.389,143.040,99.444)
C1': (50.388,141.158,100.485)
C5': (51.652,142.900,98.237)
O4': (50.491,141.023,99.080)
C8: (52.890,141.408,100.838)
O2': (49.128,142.665,101.873)
C6: (53.791,138.945,103.163)
C5: (53.281,139.864,102.240)
C4: (51.931,139.791,101.961)
P: (52.399,145.330,98.858)
C4': (50.282,142.309,98.450)
C2': (50.009,142.612,100.772)
C2: (51.648,138.095,103.329)
N1: (52.933,138.049,103.698)
N3: (51.048,138.919,102.479)
N6: (55.072,138.917,103.543)
N7: (53.876,140.888,101.521)
N9: (51.682,140.801,101.063)
O5': (51.558,144.289,98.000)
O3': (48.070,142.510,99.319)
OP2: (53.310,144.641,99.790)
C3': (49.389,143.040,99.444)
C1': (50.388,141.158,100.485)
C5': (51.652,142.900,98.237)
O4': (50.491,141.023,99.080)
C8: (52.890,141.408,100.838)
O2': (49.128,142.665,101.873)
C6: (53.791,138.945,103.163)
C5: (53.281,139.864,102.240)
C4: (51.931,139.791,101.961)
P: (52.399,145.330,98.858)
C4': (50.282,142.309,98.450)
C2': (50.009,142.612,100.772)
C2: (51.648,138.095,103.329)
N1: (52.933,138.049,103.698)
N3: (51.048,138.919,102.479)
N6: (55.072,138.917,103.543)
N7: (53.876,140.888,101.521)
N9: (51.682,140.801,101.063)
O5': (51.558,144.289,98.000)
O3': (48.070,142.510,99.319)
Image (generated by PyMOL):