Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C57:C9
Extra
PDB:
ATOM 1 O3' C A 56 9.731 -24.523 -51.605 1.00 48.08 O
ATOM 2 P G A 57 11.219 -24.920 -51.149 1.00 56.07 P
ATOM 3 OP1 G A 57 11.178 -25.169 -49.688 1.00 65.93 O
ATOM 4 OP2 G A 57 12.130 -23.869 -51.668 1.00 54.15 O
ATOM 5 O5' G A 57 11.474 -26.289 -51.924 1.00 53.51 O
ATOM 6 C5' G A 57 10.686 -27.439 -51.650 1.00 55.55 C
ATOM 7 C4' G A 57 11.146 -28.633 -52.452 1.00 50.66 C
ATOM 8 O4' G A 57 10.932 -28.393 -53.866 1.00 50.47 O
ATOM 9 C3' G A 57 12.625 -28.976 -52.356 1.00 52.33 C
ATOM 10 O3' G A 57 12.948 -29.698 -51.179 1.00 62.09 O
ATOM 11 C2' G A 57 12.868 -29.759 -53.639 1.00 55.92 C
ATOM 12 O2' G A 57 12.420 -31.100 -53.501 1.00 60.34 O
ATOM 13 C1' G A 57 11.939 -29.037 -54.619 1.00 56.57 C
ATOM 14 N9 G A 57 12.655 -28.023 -55.418 1.00 51.23 N
ATOM 15 C8 G A 57 12.802 -26.687 -55.140 1.00 47.81 C
ATOM 16 N7 G A 57 13.490 -26.053 -56.048 1.00 45.88 N
ATOM 17 C5 G A 57 13.814 -27.024 -56.983 1.00 45.83 C
ATOM 18 C6 G A 57 14.551 -26.931 -58.191 1.00 51.43 C
ATOM 19 O6 G A 57 15.084 -25.936 -58.694 1.00 53.92 O
ATOM 20 N1 G A 57 14.641 -28.162 -58.832 1.00 51.96 N
ATOM 21 C2 G A 57 14.091 -29.334 -58.373 1.00 51.56 C
ATOM 22 N2 G A 57 14.286 -30.421 -59.135 1.00 49.28 N
ATOM 23 N3 G A 57 13.402 -29.433 -57.248 1.00 49.48 N
ATOM 24 C4 G A 57 13.303 -28.247 -56.609 1.00 47.20 C
ATOM 25 P A A 58 14.470 -29.774 -50.666 1.00 65.63 P
ATOM 26 OP1 A A 58 14.429 -30.151 -49.233 1.00 59.57 O
ATOM 27 OP2 A A 58 15.123 -28.499 -51.046 1.00 65.47 O
ATOM 28 O5' A A 58 15.072 -30.973 -51.525 1.00 58.61 O
TER
ATOM 1 O3' A B 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 2 P A B 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 3 OP1 A B 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 4 OP2 A B 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 5 O5' A B 9 19.302 -22.192 -58.587 1.00 47.17 O
ATOM 6 C5' A B 9 20.595 -22.287 -59.163 1.00 45.49 C
ATOM 7 C4' A B 9 20.893 -23.690 -59.627 1.00 43.51 C
ATOM 8 O4' A B 9 21.023 -24.570 -58.483 1.00 48.34 O
ATOM 9 C3' A B 9 19.825 -24.350 -60.482 1.00 46.63 C
ATOM 10 O3' A B 9 19.880 -23.947 -61.840 1.00 50.07 O
ATOM 11 C2' A B 9 20.102 -25.834 -60.275 1.00 49.16 C
ATOM 12 O2' A B 9 21.186 -26.260 -61.086 1.00 48.79 O
ATOM 13 C1' A B 9 20.554 -25.859 -58.813 1.00 45.79 C
ATOM 14 N9 A B 9 19.455 -26.213 -57.897 1.00 45.36 N
ATOM 15 C8 A B 9 18.825 -25.420 -56.973 1.00 44.40 C
ATOM 16 N7 A B 9 17.882 -26.036 -56.303 1.00 38.30 N
ATOM 17 C5 A B 9 17.895 -27.323 -56.822 1.00 46.48 C
ATOM 18 C6 A B 9 17.134 -28.469 -56.535 1.00 49.10 C
ATOM 19 N6 A B 9 16.167 -28.503 -55.615 1.00 51.41 N
ATOM 20 N1 A B 9 17.402 -29.594 -57.235 1.00 47.66 N
ATOM 21 C2 A B 9 18.370 -29.560 -58.159 1.00 48.62 C
ATOM 22 N3 A B 9 19.154 -28.547 -58.517 1.00 47.17 N
ATOM 23 C4 A B 9 18.861 -27.447 -57.802 1.00 45.21 C
ATOM 24 P C B 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 25 OP1 C B 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 26 OP2 C B 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 27 O5' C B 10 19.293 -21.757 -62.903 1.00 56.05 O
TER
ATOM 2 P G A 57 11.219 -24.920 -51.149 1.00 56.07 P
ATOM 3 OP1 G A 57 11.178 -25.169 -49.688 1.00 65.93 O
ATOM 4 OP2 G A 57 12.130 -23.869 -51.668 1.00 54.15 O
ATOM 5 O5' G A 57 11.474 -26.289 -51.924 1.00 53.51 O
ATOM 6 C5' G A 57 10.686 -27.439 -51.650 1.00 55.55 C
ATOM 7 C4' G A 57 11.146 -28.633 -52.452 1.00 50.66 C
ATOM 8 O4' G A 57 10.932 -28.393 -53.866 1.00 50.47 O
ATOM 9 C3' G A 57 12.625 -28.976 -52.356 1.00 52.33 C
ATOM 10 O3' G A 57 12.948 -29.698 -51.179 1.00 62.09 O
ATOM 11 C2' G A 57 12.868 -29.759 -53.639 1.00 55.92 C
ATOM 12 O2' G A 57 12.420 -31.100 -53.501 1.00 60.34 O
ATOM 13 C1' G A 57 11.939 -29.037 -54.619 1.00 56.57 C
ATOM 14 N9 G A 57 12.655 -28.023 -55.418 1.00 51.23 N
ATOM 15 C8 G A 57 12.802 -26.687 -55.140 1.00 47.81 C
ATOM 16 N7 G A 57 13.490 -26.053 -56.048 1.00 45.88 N
ATOM 17 C5 G A 57 13.814 -27.024 -56.983 1.00 45.83 C
ATOM 18 C6 G A 57 14.551 -26.931 -58.191 1.00 51.43 C
ATOM 19 O6 G A 57 15.084 -25.936 -58.694 1.00 53.92 O
ATOM 20 N1 G A 57 14.641 -28.162 -58.832 1.00 51.96 N
ATOM 21 C2 G A 57 14.091 -29.334 -58.373 1.00 51.56 C
ATOM 22 N2 G A 57 14.286 -30.421 -59.135 1.00 49.28 N
ATOM 23 N3 G A 57 13.402 -29.433 -57.248 1.00 49.48 N
ATOM 24 C4 G A 57 13.303 -28.247 -56.609 1.00 47.20 C
ATOM 25 P A A 58 14.470 -29.774 -50.666 1.00 65.63 P
ATOM 26 OP1 A A 58 14.429 -30.151 -49.233 1.00 59.57 O
ATOM 27 OP2 A A 58 15.123 -28.499 -51.046 1.00 65.47 O
ATOM 28 O5' A A 58 15.072 -30.973 -51.525 1.00 58.61 O
TER
ATOM 1 O3' A B 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 2 P A B 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 3 OP1 A B 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 4 OP2 A B 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 5 O5' A B 9 19.302 -22.192 -58.587 1.00 47.17 O
ATOM 6 C5' A B 9 20.595 -22.287 -59.163 1.00 45.49 C
ATOM 7 C4' A B 9 20.893 -23.690 -59.627 1.00 43.51 C
ATOM 8 O4' A B 9 21.023 -24.570 -58.483 1.00 48.34 O
ATOM 9 C3' A B 9 19.825 -24.350 -60.482 1.00 46.63 C
ATOM 10 O3' A B 9 19.880 -23.947 -61.840 1.00 50.07 O
ATOM 11 C2' A B 9 20.102 -25.834 -60.275 1.00 49.16 C
ATOM 12 O2' A B 9 21.186 -26.260 -61.086 1.00 48.79 O
ATOM 13 C1' A B 9 20.554 -25.859 -58.813 1.00 45.79 C
ATOM 14 N9 A B 9 19.455 -26.213 -57.897 1.00 45.36 N
ATOM 15 C8 A B 9 18.825 -25.420 -56.973 1.00 44.40 C
ATOM 16 N7 A B 9 17.882 -26.036 -56.303 1.00 38.30 N
ATOM 17 C5 A B 9 17.895 -27.323 -56.822 1.00 46.48 C
ATOM 18 C6 A B 9 17.134 -28.469 -56.535 1.00 49.10 C
ATOM 19 N6 A B 9 16.167 -28.503 -55.615 1.00 51.41 N
ATOM 20 N1 A B 9 17.402 -29.594 -57.235 1.00 47.66 N
ATOM 21 C2 A B 9 18.370 -29.560 -58.159 1.00 48.62 C
ATOM 22 N3 A B 9 19.154 -28.547 -58.517 1.00 47.17 N
ATOM 23 C4 A B 9 18.861 -27.447 -57.802 1.00 45.21 C
ATOM 24 P C B 10 18.646 -23.157 -62.501 1.00 53.66 P
ATOM 25 OP1 C B 10 17.633 -22.959 -61.436 1.00 50.37 O
ATOM 26 OP2 C B 10 18.257 -23.902 -63.723 1.00 47.19 O
ATOM 27 O5' C B 10 19.293 -21.757 -62.903 1.00 56.05 O
TER
Atoms:
OP1: (11.178,-25.169,-49.688)
OP2: (12.130,-23.869,-51.668)
C3': (12.625,-28.976,-52.356)
C1': (11.939,-29.037,-54.619)
C5': (10.686,-27.439,-51.650)
O6: (15.084,-25.936,-58.694)
O4': (10.932,-28.393,-53.866)
C8: (12.802,-26.687,-55.140)
C2: (14.091,-29.334,-58.373)
C6: (14.551,-26.931,-58.191)
C5: (13.814,-27.024,-56.983)
C4: (13.303,-28.247,-56.609)
P: (11.219,-24.920,-51.149)
C4': (11.146,-28.633,-52.452)
C2': (12.868,-29.759,-53.639)
O2': (12.420,-31.100,-53.501)
N1: (14.641,-28.162,-58.832)
N2: (14.286,-30.421,-59.135)
N3: (13.402,-29.433,-57.248)
N7: (13.490,-26.053,-56.048)
N9: (12.655,-28.023,-55.418)
O5': (11.474,-26.289,-51.924)
O3': (12.948,-29.698,-51.179)
OP2: (12.130,-23.869,-51.668)
C3': (12.625,-28.976,-52.356)
C1': (11.939,-29.037,-54.619)
C5': (10.686,-27.439,-51.650)
O6: (15.084,-25.936,-58.694)
O4': (10.932,-28.393,-53.866)
C8: (12.802,-26.687,-55.140)
C2: (14.091,-29.334,-58.373)
C6: (14.551,-26.931,-58.191)
C5: (13.814,-27.024,-56.983)
C4: (13.303,-28.247,-56.609)
P: (11.219,-24.920,-51.149)
C4': (11.146,-28.633,-52.452)
C2': (12.868,-29.759,-53.639)
O2': (12.420,-31.100,-53.501)
N1: (14.641,-28.162,-58.832)
N2: (14.286,-30.421,-59.135)
N3: (13.402,-29.433,-57.248)
N7: (13.490,-26.053,-56.048)
N9: (12.655,-28.023,-55.418)
O5': (11.474,-26.289,-51.924)
O3': (12.948,-29.698,-51.179)
OP1: (17.643,-21.494,-56.828)
OP2: (20.078,-21.932,-56.208)
C3': (19.825,-24.350,-60.482)
C1': (20.554,-25.859,-58.813)
C5': (20.595,-22.287,-59.163)
O4': (21.023,-24.570,-58.483)
C8: (18.825,-25.420,-56.973)
O2': (21.186,-26.260,-61.086)
C6: (17.134,-28.469,-56.535)
C5: (17.895,-27.323,-56.822)
C4: (18.861,-27.447,-57.802)
P: (19.080,-21.454,-57.193)
C4': (20.893,-23.690,-59.627)
C2': (20.102,-25.834,-60.275)
C2: (18.370,-29.560,-58.159)
N1: (17.402,-29.594,-57.235)
N3: (19.154,-28.547,-58.517)
N6: (16.167,-28.503,-55.615)
N7: (17.882,-26.036,-56.303)
N9: (19.455,-26.213,-57.897)
O5': (19.302,-22.192,-58.587)
O3': (19.880,-23.947,-61.840)
OP2: (20.078,-21.932,-56.208)
C3': (19.825,-24.350,-60.482)
C1': (20.554,-25.859,-58.813)
C5': (20.595,-22.287,-59.163)
O4': (21.023,-24.570,-58.483)
C8: (18.825,-25.420,-56.973)
O2': (21.186,-26.260,-61.086)
C6: (17.134,-28.469,-56.535)
C5: (17.895,-27.323,-56.822)
C4: (18.861,-27.447,-57.802)
P: (19.080,-21.454,-57.193)
C4': (20.893,-23.690,-59.627)
C2': (20.102,-25.834,-60.275)
C2: (18.370,-29.560,-58.159)
N1: (17.402,-29.594,-57.235)
N3: (19.154,-28.547,-58.517)
N6: (16.167,-28.503,-55.615)
N7: (17.882,-26.036,-56.303)
N9: (19.455,-26.213,-57.897)
O5': (19.302,-22.192,-58.587)
O3': (19.880,-23.947,-61.840)
Image (generated by PyMOL):